scaffold14147 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14147 |
204 |
596 |
- |
EnSpm-4_STu |
DNA/CMC-EnSpm |
| scaffold14147 |
1153 |
2828 |
- |
EnSpm-1_EPa |
DNA/CMC-EnSpm |
| scaffold14147 |
4197 |
4239 |
+ |
(TTTCGGT)n |
Simple_repeat |
| scaffold14147 |
4705 |
5195 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold14147 |
4923 |
5333 |
+ |
hAT |
hAT(TransposonPSI) |
| scaffold14147 |
5351 |
6094 |
+ |
hAT-3_PTr |
DNA/hAT-Ac |
| scaffold14147 |
6159 |
6417 |
+ |
RS1267 |
Unspecified |
| scaffold14147 |
6513 |
6835 |
+ |
RS1267 |
Unspecified |
| scaffold14147 |
6896 |
7190 |
+ |
RS1267 |
Unspecified |
| scaffold14147 |
8323 |
9603 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold14147 |
8336 |
9321 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold14147 |
9908 |
9997 |
+ |
RS1267 |
Unspecified |
| scaffold14147 |
10005 |
10865 |
+ |
hAT |
hAT(TransposonPSI) |
| scaffold14147 |
10191 |
10281 |
+ |
TAG2 |
DNA/hAT-Ac |
| scaffold14147 |
10542 |
10801 |
+ |
hAT-7_PTr |
DNA/hAT-Ac |
| scaffold14147 |
10911 |
10939 |
+ |
(T)n |
Simple_repeat |
| scaffold14147 |
11450 |
11620 |
+ |
RS5814 |
Unspecified |
| scaffold14147 |
11622 |
14389 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold14147 |
14430 |
15026 |
- |
PL814 |
Unspecified |
| scaffold14147 |
15033 |
15092 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14147 |
15983 |
16028 |
+ |
(T)n |
Simple_repeat |
| scaffold14147 |
16975 |
17034 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
17533 |
18428 |
+ |
RS18353 |
Unspecified |
| scaffold14147 |
18650 |
18719 |
+ |
RS137 |
Unspecified |
| scaffold14147 |
18909 |
18924 |
+ |
(GTGT)n |
Simple_repeat |
| scaffold14147 |
18925 |
18959 |
+ |
(TGTTG)n |
Simple_repeat |
| scaffold14147 |
19056 |
19098 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold14147 |
22484 |
22584 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold14147 |
22924 |
23524 |
- |
PL814 |
Unspecified |
| scaffold14147 |
23702 |
23731 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
24223 |
24287 |
+ |
RS959 |
Unspecified |
| scaffold14147 |
24565 |
24591 |
+ |
(T)n |
Simple_repeat |
| scaffold14147 |
24717 |
24767 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold14147 |
25975 |
26066 |
+ |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold14147 |
27512 |
27667 |
+ |
RS3059 |
Unspecified |
| scaffold14147 |
27923 |
27977 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
28046 |
28588 |
+ |
RS1281 |
Unspecified |
| scaffold14147 |
28644 |
28727 |
+ |
(ATGTTTTA)n |
Simple_repeat |
| scaffold14147 |
28800 |
28861 |
+ |
(ATTTCAAA)n |
Simple_repeat |
| scaffold14147 |
28975 |
29001 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
29202 |
29754 |
- |
RS1571 |
Unspecified |
| scaffold14147 |
29813 |
30278 |
+ |
RS2807 |
Unspecified |
| scaffold14147 |
32176 |
32229 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
32260 |
32346 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
32383 |
32402 |
+ |
(TA)n |
Simple_repeat |
| scaffold14147 |
33415 |
33444 |
+ |
(TCTT)n |
Simple_repeat |
| scaffold14147 |
33448 |
33499 |
+ |
(T)n |
Simple_repeat |
| scaffold14147 |
35746 |
35781 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold14147 |
36442 |
36495 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
36543 |
36612 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
37230 |
37508 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold14147 |
38220 |
38254 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
38715 |
38754 |
+ |
(AACT)n |
Simple_repeat |
| scaffold14147 |
38851 |
39251 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold14147 |
39523 |
39650 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold14147 |
39985 |
40311 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold14147 |
40496 |
40550 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold14147 |
40652 |
40946 |
+ |
PL347 |
Unspecified |
| scaffold14147 |
41037 |
41314 |
- |
PL188 |
Unspecified |
| scaffold14147 |
41392 |
41627 |
- |
RS4 |
Unspecified |
| scaffold14147 |
42954 |
43143 |
- |
RS1109 |
Unspecified |
| scaffold14147 |
43776 |
43831 |
+ |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold14147 |
43886 |
43921 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
44063 |
44117 |
+ |
RS38 |
Unspecified |
| scaffold14147 |
44640 |
44703 |
+ |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold14147 |
44951 |
45062 |
- |
RS15138 |
Unspecified |
| scaffold14147 |
44965 |
45221 |
+ |
RS1 |
Unspecified |
| scaffold14147 |
45458 |
45749 |
+ |
RS1746 |
Unspecified |
| scaffold14147 |
45525 |
45819 |
- |
RS1746 |
Unspecified |
| scaffold14147 |
46191 |
46228 |
+ |
(ATCGTCA)n |
Simple_repeat |
| scaffold14147 |
46742 |
46964 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold14147 |
48132 |
48168 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
48735 |
49147 |
- |
PL773 |
Unspecified |
| scaffold14147 |
49233 |
49279 |
+ |
(TCAGC)n |
Simple_repeat |
| scaffold14147 |
49705 |
49741 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
49963 |
50025 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold14147 |
50188 |
50207 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
50242 |
50285 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
50388 |
50426 |
+ |
(TT)n |
Simple_repeat |
| scaffold14147 |
50484 |
50522 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
50804 |
50867 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14147 |
51234 |
51599 |
- |
RS221 |
Unspecified |
| scaffold14147 |
51613 |
51636 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
51678 |
51839 |
- |
RS3756 |
Unspecified |
| scaffold14147 |
52133 |
52390 |
- |
RS1 |
Unspecified |
| scaffold14147 |
53710 |
53828 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold14147 |
54069 |
54545 |
- |
PL6 |
Unspecified |
| scaffold14147 |
55417 |
55575 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold14147 |
55576 |
55639 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold14147 |
55640 |
55662 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold14147 |
55730 |
56207 |
+ |
PL271 |
Unspecified |
| scaffold14147 |
56218 |
56492 |
+ |
RS586 |
Unspecified |
| scaffold14147 |
56488 |
56624 |
+ |
RS4 |
Unspecified |
| scaffold14147 |
56970 |
57549 |
- |
PL268 |
Unspecified |
| scaffold14147 |
58904 |
58952 |
+ |
(ATA)n |
Simple_repeat |
| scaffold14147 |
59421 |
59457 |
+ |
L1-10_STu |
LINE/L1 |
| scaffold14147 |
60014 |
61525 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold14147 |
60092 |
60135 |
+ |
LINE_LS |
LINE/L1 |
| scaffold14147 |
60325 |
61113 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold14147 |
61283 |
61487 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold14147 |
62489 |
62601 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
63431 |
63630 |
- |
RS1669 |
Unspecified |
| scaffold14147 |
64017 |
64143 |
+ |
ATCOPIN_LTR |
LTR |
| scaffold14147 |
65379 |
65455 |
+ |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
| scaffold14147 |
66008 |
66056 |
+ |
PL572 |
Unspecified |
| scaffold14147 |
66008 |
66067 |
- |
PL777 |
Unspecified |
| scaffold14147 |
66016 |
66067 |
- |
RS29 |
Unspecified |
| scaffold14147 |
66027 |
66263 |
- |
RS29 |
Unspecified |
| scaffold14147 |
66181 |
66281 |
+ |
PL777 |
Unspecified |
| scaffold14147 |
66186 |
66274 |
+ |
RS29 |
Unspecified |
| scaffold14147 |
66886 |
66939 |
- |
Copia24-ZM_I-int |
LTR/Copia |
| scaffold14147 |
68901 |
68925 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
70701 |
70731 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
71218 |
71254 |
+ |
(TTTTGAG)n |
Simple_repeat |
| scaffold14147 |
71527 |
71581 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold14147 |
72233 |
72404 |
- |
hAT-1_GM |
DNA/hAT-Ac |
| scaffold14147 |
72726 |
74078 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold14147 |
72838 |
73957 |
- |
HAT1_MT |
DNA/hAT-Ac |
| scaffold14147 |
74927 |
74996 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold14147 |
76688 |
77522 |
- |
PL807 |
Unspecified |
| scaffold14147 |
77651 |
77683 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14147 |
77826 |
77846 |
+ |
(CT)n |
Simple_repeat |
| scaffold14147 |
78051 |
78349 |
+ |
PL827 |
Unspecified |
| scaffold14147 |
78052 |
78314 |
+ |
RS314 |
Unspecified |
| scaffold14147 |
79296 |
79343 |
+ |
(ATCCGAC)n |
Simple_repeat |
| scaffold14147 |
79488 |
79508 |
+ |
(CT)n |
Simple_repeat |
| scaffold14147 |
79693 |
79715 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14147 |
79716 |
79765 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14147 |
79822 |
79875 |
+ |
(TGAAATTTTC)n |
Simple_repeat |
| scaffold14147 |
80129 |
80249 |
- |
RS972 |
Unspecified |
| scaffold14147 |
80146 |
80249 |
+ |
RS750 |
Unspecified |
| scaffold14147 |
80545 |
80598 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold14147 |
84573 |
84604 |
+ |
(ATG)n |
Simple_repeat |
| scaffold14147 |
84723 |
84758 |
+ |
(T)n |
Simple_repeat |
| scaffold14147 |
84977 |
85025 |
+ |
(ATAACAT)n |
Simple_repeat |
| scaffold14147 |
85443 |
85684 |
- |
RS4 |
Unspecified |
| scaffold14147 |
86248 |
87895 |
- |
PL124 |
Unspecified |
| scaffold14147 |
88125 |
88583 |
- |
Copia-46_GM-I |
LTR/Copia |
| scaffold14147 |
88833 |
88881 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
89213 |
89284 |
+ |
(CACCATCT)n |
Simple_repeat |
| scaffold14147 |
89328 |
89360 |
+ |
(T)n |
Simple_repeat |
| scaffold14147 |
89385 |
89559 |
+ |
PL544 |
Unspecified |
| scaffold14147 |
89693 |
89814 |
+ |
RS121 |
Unspecified |
| scaffold14147 |
90089 |
90134 |
+ |
(ACCAA)n |
Simple_repeat |
| scaffold14147 |
90135 |
90203 |
+ |
(ACCCAA)n |
Simple_repeat |
| scaffold14147 |
90204 |
90210 |
+ |
(ACCAA)n |
Simple_repeat |
| scaffold14147 |
91762 |
92037 |
- |
Copia-46_GM-I |
LTR/Copia |
| scaffold14147 |
92515 |
92613 |
- |
Copia-46_GM-I |
LTR/Copia |
| scaffold14147 |
93537 |
93592 |
+ |
PL718 |
Unspecified |
| scaffold14147 |
93558 |
93652 |
- |
PL222 |
Unspecified |
| scaffold14147 |
97575 |
98058 |
+ |
PL271 |
Unspecified |
| scaffold14147 |
98346 |
98376 |
+ |
(T)n |
Simple_repeat |
| scaffold14147 |
99396 |
99416 |
+ |
(A)n |
Simple_repeat |
| scaffold14147 |
99753 |
99786 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
101700 |
101817 |
+ |
PL102 |
Unspecified |
| scaffold14147 |
106608 |
106666 |
+ |
(TT)n |
Simple_repeat |
| scaffold14147 |
106666 |
107060 |
- |
PL624 |
Unspecified |
| scaffold14147 |
107380 |
107429 |
+ |
A-rich |
Low_complexity |
| scaffold14147 |
107553 |
107643 |
+ |
RS8 |
Unspecified |
| scaffold14147 |
108767 |
108823 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold14147 |
109338 |
109894 |
- |
RS696 |
Unspecified |
| scaffold14147 |
109908 |
110573 |
+ |
RS60 |
Unspecified |
| scaffold14147 |
110503 |
110885 |
- |
RS3318 |
Unspecified |
| scaffold14147 |
110629 |
110990 |
- |
RS2140 |
Unspecified |
| scaffold14147 |
112057 |
112087 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold14147 |
112141 |
113391 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14147 |
112402 |
112787 |
+ |
GmCOPIA10_I-int |
LTR/Copia |
| scaffold14147 |
114149 |
114763 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14147 |
115663 |
116016 |
+ |
TORTL1 |
LTR/Copia |
| scaffold14147 |
116171 |
117044 |
+ |
Copia-38_ST-I |
LTR/Copia |