scaffold1416 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1416 |
25 |
76 |
+ |
(AATTAGA)n |
Simple_repeat |
| scaffold1416 |
360 |
404 |
+ |
(AAGAATT)n |
Simple_repeat |
| scaffold1416 |
950 |
1027 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold1416 |
3190 |
3247 |
- |
Copia-72_VV-LTR |
LTR/Copia |
| scaffold1416 |
7299 |
7357 |
- |
STOWAWAY2_SB |
DNA/TcMar-Stowaway |
| scaffold1416 |
7379 |
7683 |
- |
RS748 |
Unspecified |
| scaffold1416 |
9189 |
9243 |
+ |
GA-rich |
Low_complexity |
| scaffold1416 |
9385 |
9414 |
+ |
(T)n |
Simple_repeat |
| scaffold1416 |
9800 |
10043 |
- |
RS14573 |
Unspecified |
| scaffold1416 |
9936 |
10081 |
- |
RS620 |
Unspecified |
| scaffold1416 |
10550 |
10728 |
- |
RS3973 |
Unspecified |
| scaffold1416 |
10550 |
10702 |
- |
RS3128 |
Unspecified |
| scaffold1416 |
10731 |
10781 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1416 |
10852 |
10962 |
+ |
RS5110 |
Unspecified |
| scaffold1416 |
11075 |
11282 |
- |
RS1541 |
Unspecified |
| scaffold1416 |
11279 |
11948 |
- |
PL530 |
Unspecified |
| scaffold1416 |
11929 |
12044 |
- |
RS15138 |
Unspecified |
| scaffold1416 |
11947 |
12117 |
+ |
RS1 |
Unspecified |
| scaffold1416 |
13452 |
13469 |
+ |
(TGTGAT)n |
Simple_repeat |
| scaffold1416 |
13470 |
13506 |
+ |
(TGG)n |
Simple_repeat |
| scaffold1416 |
13794 |
14251 |
+ |
A-rich |
Low_complexity |
| scaffold1416 |
14180 |
14341 |
+ |
A-rich |
Low_complexity |
| scaffold1416 |
14180 |
14251 |
+ |
A-rich |
Low_complexity |
| scaffold1416 |
14218 |
14341 |
+ |
RS10505 |
Unspecified |
| scaffold1416 |
14609 |
14632 |
+ |
(GAT)n |
Simple_repeat |
| scaffold1416 |
14872 |
14948 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1416 |
15013 |
15196 |
- |
RS1494 |
Unspecified |
| scaffold1416 |
15197 |
15634 |
- |
RS481 |
Unspecified |
| scaffold1416 |
15693 |
15794 |
+ |
(ATCAACA)n |
Simple_repeat |
| scaffold1416 |
16118 |
16205 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold1416 |
16501 |
16554 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold1416 |
16659 |
17000 |
- |
RS11691 |
Unspecified |
| scaffold1416 |
16699 |
17051 |
- |
RS1700 |
Unspecified |
| scaffold1416 |
17037 |
17189 |
- |
RS1700 |
Unspecified |
| scaffold1416 |
17201 |
17295 |
- |
RS5605 |
Unspecified |
| scaffold1416 |
19509 |
21455 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold1416 |
20080 |
21445 |
+ |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold1416 |
21472 |
21676 |
+ |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold1416 |
21784 |
21835 |
+ |
Gypsy-11_Pru-I |
LTR/Gypsy |
| scaffold1416 |
22108 |
23074 |
+ |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold1416 |
23173 |
23239 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold1416 |
23941 |
24175 |
- |
RS7064 |
Unspecified |
| scaffold1416 |
24038 |
24253 |
+ |
RS2202 |
Unspecified |
| scaffold1416 |
24499 |
25894 |
+ |
RS824 |
Unspecified |
| scaffold1416 |
25892 |
26022 |
- |
RS383 |
Unspecified |
| scaffold1416 |
27211 |
27782 |
+ |
RS13368 |
Unspecified |
| scaffold1416 |
28789 |
28823 |
+ |
(T)n |
Simple_repeat |
| scaffold1416 |
28905 |
29152 |
+ |
A-rich |
Low_complexity |
| scaffold1416 |
28905 |
28950 |
+ |
A-rich |
Low_complexity |
| scaffold1416 |
28933 |
29152 |
- |
PL400 |
Unspecified |
| scaffold1416 |
29152 |
29221 |
+ |
PL654 |
Unspecified |
| scaffold1416 |
29342 |
29376 |
+ |
(A)n |
Simple_repeat |
| scaffold1416 |
29375 |
29419 |
+ |
(AACACC)n |
Simple_repeat |
| scaffold1416 |
29444 |
29491 |
+ |
(CGG)n |
Simple_repeat |
| scaffold1416 |
29666 |
29713 |
+ |
(CTC)n |
Simple_repeat |
| scaffold1416 |
29745 |
29799 |
+ |
(TTGTTGT)n |
Simple_repeat |
| scaffold1416 |
35294 |
35385 |
+ |
RS9085 |
Unspecified |
| scaffold1416 |
35449 |
35509 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1416 |
35647 |
35699 |
+ |
(T)n |
Simple_repeat |
| scaffold1416 |
35816 |
35855 |
+ |
(TACCCA)n |
Simple_repeat |
| scaffold1416 |
38686 |
38825 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1416 |
38702 |
38825 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1416 |
38792 |
38825 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1416 |
38863 |
39662 |
+ |
Copia-71_BRa-I |
LTR/Copia |
| scaffold1416 |
40040 |
40117 |
- |
RS138 |
Unspecified |
| scaffold1416 |
41977 |
41998 |
+ |
(A)n |
Simple_repeat |
| scaffold1416 |
44144 |
44176 |
+ |
(A)n |
Simple_repeat |
| scaffold1416 |
50737 |
50762 |
+ |
(A)n |
Simple_repeat |
| scaffold1416 |
50829 |
50892 |
+ |
(CAC)n |
Simple_repeat |
| scaffold1416 |
51086 |
51123 |
+ |
G-rich |
Low_complexity |
| scaffold1416 |
51175 |
51267 |
+ |
(GTG)n |
Simple_repeat |
| scaffold1416 |
53316 |
53513 |
- |
RS2565 |
Unspecified |
| scaffold1416 |
55989 |
56025 |
+ |
A-rich |
Low_complexity |
| scaffold1416 |
60211 |
60234 |
+ |
(A)n |
Simple_repeat |
| scaffold1416 |
60593 |
60610 |
+ |
(T)n |
Simple_repeat |
| scaffold1416 |
63247 |
63293 |
- |
RS13225 |
Unspecified |
| scaffold1416 |
63445 |
63480 |
+ |
(TTAATTG)n |
Simple_repeat |
| scaffold1416 |
63645 |
63677 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1416 |
64218 |
64276 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1416 |
64392 |
64433 |
+ |
(A)n |
Simple_repeat |
| scaffold1416 |
64612 |
64718 |
+ |
(TTG)n |
Simple_repeat |
| scaffold1416 |
69833 |
69984 |
+ |
RS498 |
Unspecified |