scaffold14178 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14178 |
1 |
68 |
- |
RS954 |
Unspecified |
| scaffold14178 |
66 |
118 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
437 |
897 |
+ |
PL2 |
Unspecified |
| scaffold14178 |
898 |
1269 |
+ |
PL744 |
Unspecified |
| scaffold14178 |
1493 |
1510 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
3773 |
3820 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold14178 |
6734 |
6834 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14178 |
6994 |
7148 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14178 |
7170 |
7223 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold14178 |
9788 |
9879 |
+ |
LT1_EPa |
LTR? |
| scaffold14178 |
9970 |
10023 |
+ |
(ATG)n |
Simple_repeat |
| scaffold14178 |
10986 |
11056 |
+ |
MUDRAVI1 |
DNA/MULE-MuDR |
| scaffold14178 |
10995 |
11069 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold14178 |
11793 |
11931 |
+ |
(GTG)n |
Simple_repeat |
| scaffold14178 |
12464 |
12492 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold14178 |
13110 |
13146 |
+ |
(ACAAGA)n |
Simple_repeat |
| scaffold14178 |
14135 |
14315 |
+ |
RS13085 |
Unspecified |
| scaffold14178 |
14557 |
14596 |
- |
RS17699 |
Unspecified |
| scaffold14178 |
14569 |
14821 |
- |
RS1 |
Unspecified |
| scaffold14178 |
15652 |
15730 |
- |
RS13832 |
Unspecified |
| scaffold14178 |
15890 |
15919 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14178 |
18002 |
18035 |
- |
ATHILA6C_LTR |
LTR/Gypsy |
| scaffold14178 |
18154 |
18213 |
+ |
(TTAATAT)n |
Simple_repeat |
| scaffold14178 |
18217 |
18259 |
+ |
(TGTTTTAT)n |
Simple_repeat |
| scaffold14178 |
18442 |
18606 |
- |
RS38 |
Unspecified |
| scaffold14178 |
18948 |
18972 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
24658 |
25234 |
+ |
PL25 |
Unspecified |
| scaffold14178 |
26650 |
26686 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold14178 |
30690 |
30724 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14178 |
32869 |
32916 |
+ |
EnSpm-10_STu |
DNA/CMC-EnSpm |
| scaffold14178 |
32934 |
32955 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
36352 |
36385 |
+ |
(AACAACA)n |
Simple_repeat |
| scaffold14178 |
37246 |
37272 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
37379 |
37417 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
37615 |
37633 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
37677 |
37716 |
- |
RS17699 |
Unspecified |
| scaffold14178 |
37683 |
37955 |
- |
RS1 |
Unspecified |
| scaffold14178 |
38859 |
38935 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
39066 |
39186 |
- |
RS622 |
Unspecified |
| scaffold14178 |
39345 |
39375 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold14178 |
40400 |
40664 |
- |
RS82 |
Unspecified |
| scaffold14178 |
41014 |
41059 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
41482 |
41704 |
- |
RS600 |
Unspecified |
| scaffold14178 |
42452 |
42541 |
- |
RS12885 |
Unspecified |
| scaffold14178 |
42463 |
42561 |
+ |
RS16382 |
Unspecified |
| scaffold14178 |
42465 |
42574 |
- |
RS4475 |
Unspecified |
| scaffold14178 |
42763 |
42893 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold14178 |
43734 |
43838 |
- |
RS18309 |
Unspecified |
| scaffold14178 |
44456 |
44477 |
- |
Sat-1_CPa |
Satellite |
| scaffold14178 |
44478 |
44513 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
44514 |
44547 |
- |
EnSpm1_SB |
DNA/En-Spm |
| scaffold14178 |
44518 |
44552 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold14178 |
44611 |
44722 |
- |
PL753 |
Unspecified |
| scaffold14178 |
44621 |
44709 |
- |
PL153 |
Unspecified |
| scaffold14178 |
44621 |
44720 |
- |
PL734 |
Unspecified |
| scaffold14178 |
45065 |
45114 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
46876 |
46897 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14178 |
46972 |
47065 |
+ |
PL226 |
Unspecified |
| scaffold14178 |
48106 |
48127 |
- |
Sat-1_CPa |
Satellite |
| scaffold14178 |
48128 |
48163 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
48164 |
48197 |
- |
EnSpm1_SB |
DNA/En-Spm |
| scaffold14178 |
48168 |
48202 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold14178 |
48254 |
48280 |
+ |
(ATCAG)n |
Simple_repeat |
| scaffold14178 |
48475 |
48954 |
+ |
PL6 |
Unspecified |
| scaffold14178 |
48951 |
49019 |
+ |
(CTTTTT)n |
Simple_repeat |
| scaffold14178 |
49453 |
49561 |
+ |
RS4475 |
Unspecified |
| scaffold14178 |
49455 |
49548 |
- |
RS16382 |
Unspecified |
| scaffold14178 |
51336 |
51374 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
51509 |
51554 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold14178 |
52555 |
52590 |
+ |
(TAGTTTT)n |
Simple_repeat |
| scaffold14178 |
52910 |
53001 |
- |
RS3146 |
Unspecified |
| scaffold14178 |
53234 |
53303 |
+ |
(TATCTTTA)n |
Simple_repeat |
| scaffold14178 |
53391 |
53427 |
+ |
(TTAG)n |
Simple_repeat |
| scaffold14178 |
53571 |
53607 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
53697 |
53736 |
+ |
(ACCGAC)n |
Simple_repeat |
| scaffold14178 |
54113 |
54147 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
54298 |
54485 |
+ |
RS17052 |
Unspecified |
| scaffold14178 |
54458 |
54643 |
- |
PL580 |
Unspecified |
| scaffold14178 |
55114 |
55416 |
+ |
RS15118 |
Unspecified |
| scaffold14178 |
55736 |
55924 |
+ |
RS15319 |
Unspecified |
| scaffold14178 |
58231 |
58264 |
+ |
(TTTGTT)n |
Simple_repeat |
| scaffold14178 |
59191 |
59644 |
- |
RS4632 |
Unspecified |
| scaffold14178 |
59384 |
59718 |
+ |
RS7544 |
Unspecified |
| scaffold14178 |
59765 |
60099 |
+ |
RS7544 |
Unspecified |
| scaffold14178 |
60119 |
60150 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold14178 |
60202 |
60292 |
+ |
RS7544 |
Unspecified |
| scaffold14178 |
60310 |
60346 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14178 |
60711 |
60751 |
+ |
(ATATACG)n |
Simple_repeat |
| scaffold14178 |
62314 |
62341 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold14178 |
62422 |
62473 |
+ |
(TTGGA)n |
Simple_repeat |
| scaffold14178 |
63281 |
63381 |
+ |
RS16300 |
Unspecified |
| scaffold14178 |
64457 |
64512 |
+ |
SINE2-1_STu |
SINE/tRNA |
| scaffold14178 |
66075 |
66227 |
+ |
RS14229 |
Unspecified |
| scaffold14178 |
70307 |
70412 |
- |
RS7215 |
Unspecified |
| scaffold14178 |
72937 |
73043 |
+ |
RS8 |
Unspecified |
| scaffold14178 |
73569 |
73775 |
- |
RS255 |
Unspecified |
| scaffold14178 |
73777 |
74231 |
- |
RS4632 |
Unspecified |
| scaffold14178 |
73971 |
74350 |
+ |
RS7544 |
Unspecified |
| scaffold14178 |
75239 |
75502 |
+ |
RS621 |
Unspecified |
| scaffold14178 |
77227 |
77255 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
78090 |
78122 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold14178 |
78758 |
78787 |
+ |
(CAG)n |
Simple_repeat |
| scaffold14178 |
80286 |
80360 |
+ |
RS5829 |
Unspecified |
| scaffold14178 |
80611 |
80650 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
82159 |
82199 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold14178 |
82677 |
82780 |
+ |
RS987 |
Unspecified |
| scaffold14178 |
82720 |
82864 |
+ |
RS115 |
Unspecified |
| scaffold14178 |
82924 |
82950 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14178 |
83341 |
83658 |
+ |
RS1277 |
Unspecified |
| scaffold14178 |
84329 |
84449 |
- |
RS324 |
Unspecified |
| scaffold14178 |
84450 |
84580 |
- |
RS27 |
Unspecified |
| scaffold14178 |
84508 |
84590 |
- |
PL723 |
Unspecified |
| scaffold14178 |
94496 |
94576 |
+ |
RS1854 |
Unspecified |
| scaffold14178 |
94511 |
94681 |
+ |
RS17860 |
Unspecified |
| scaffold14178 |
94934 |
94991 |
+ |
Copia-113_BRa-I |
LTR/Copia |
| scaffold14178 |
95176 |
95271 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14178 |
95289 |
95439 |
+ |
ATCopia18I |
LTR/Copia |
| scaffold14178 |
95516 |
95744 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold14178 |
95832 |
96044 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14178 |
95833 |
96022 |
+ |
Copia-113_BRa-I |
LTR/Copia |
| scaffold14178 |
96906 |
96950 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
97014 |
97053 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
102051 |
102087 |
+ |
GA-rich |
Low_complexity |
| scaffold14178 |
103694 |
103808 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
103871 |
103889 |
+ |
(AAC)n |
Simple_repeat |
| scaffold14178 |
104107 |
104132 |
+ |
(GTT)n |
Simple_repeat |
| scaffold14178 |
104277 |
104323 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
104328 |
104443 |
- |
RS86 |
Unspecified |
| scaffold14178 |
104812 |
105063 |
- |
RS145 |
Unspecified |
| scaffold14178 |
105589 |
105808 |
- |
RS16183 |
Unspecified |
| scaffold14178 |
105916 |
106061 |
+ |
RS17294 |
Unspecified |
| scaffold14178 |
106312 |
106482 |
+ |
RS16543 |
Unspecified |
| scaffold14178 |
108887 |
108932 |
+ |
L1-3_EPa |
LINE/L1 |
| scaffold14178 |
109422 |
109440 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
110123 |
110156 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
110207 |
110255 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
110326 |
110351 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
111419 |
111452 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
111503 |
111551 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
111622 |
111647 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
114169 |
114309 |
+ |
RS16268 |
Unspecified |
| scaffold14178 |
114449 |
114492 |
+ |
(GTTTAT)n |
Simple_repeat |
| scaffold14178 |
115563 |
115703 |
+ |
RS16268 |
Unspecified |
| scaffold14178 |
115843 |
115868 |
+ |
(GTTTAT)n |
Simple_repeat |
| scaffold14178 |
116209 |
116468 |
+ |
PL762 |
Unspecified |
| scaffold14178 |
118656 |
118822 |
+ |
RS138 |
Unspecified |
| scaffold14178 |
121046 |
121089 |
+ |
(AAC)n |
Simple_repeat |
| scaffold14178 |
121579 |
121688 |
+ |
RS17 |
Unspecified |
| scaffold14178 |
121747 |
121825 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14178 |
121941 |
121999 |
+ |
(TCATA)n |
Simple_repeat |
| scaffold14178 |
122079 |
122108 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
122934 |
122969 |
+ |
(TCATTA)n |
Simple_repeat |
| scaffold14178 |
123222 |
123333 |
+ |
RS285 |
Unspecified |
| scaffold14178 |
123578 |
123624 |
+ |
(AAC)n |
Simple_repeat |
| scaffold14178 |
124248 |
124276 |
+ |
(TCATA)n |
Simple_repeat |
| scaffold14178 |
125814 |
126008 |
- |
RS14350 |
Unspecified |
| scaffold14178 |
126190 |
126229 |
+ |
PL370 |
Unspecified |
| scaffold14178 |
126191 |
126248 |
+ |
PL737 |
Unspecified |
| scaffold14178 |
126654 |
126690 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
126924 |
126960 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold14178 |
127021 |
127074 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14178 |
127236 |
127435 |
+ |
RS11088 |
Unspecified |
| scaffold14178 |
129032 |
129068 |
+ |
RS17764 |
Unspecified |
| scaffold14178 |
129267 |
129447 |
+ |
RS11088 |
Unspecified |
| scaffold14178 |
130566 |
131084 |
+ |
PL130 |
Unspecified |
| scaffold14178 |
131851 |
131945 |
+ |
RS2718 |
Unspecified |
| scaffold14178 |
131940 |
132219 |
+ |
RS2718 |
Unspecified |
| scaffold14178 |
132260 |
132295 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
132260 |
132522 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
132280 |
132522 |
+ |
RS17764 |
Unspecified |
| scaffold14178 |
132515 |
132717 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold14178 |
132591 |
132717 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold14178 |
132966 |
133025 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold14178 |
133249 |
133296 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold14178 |
133526 |
133545 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
133620 |
133871 |
+ |
RS4 |
Unspecified |
| scaffold14178 |
134499 |
134541 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14178 |
135399 |
135435 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
135701 |
135744 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14178 |
136122 |
136157 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
136226 |
136496 |
+ |
RS356 |
Unspecified |
| scaffold14178 |
136859 |
136883 |
+ |
(AAG)n |
Simple_repeat |
| scaffold14178 |
138153 |
138185 |
+ |
(GATGAC)n |
Simple_repeat |
| scaffold14178 |
138350 |
138383 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold14178 |
139101 |
139344 |
+ |
RS11088 |
Unspecified |
| scaffold14178 |
139575 |
140010 |
+ |
RS9953 |
Unspecified |
| scaffold14178 |
140054 |
140289 |
+ |
PL269 |
Unspecified |
| scaffold14178 |
140754 |
140873 |
- |
RS13295 |
Unspecified |
| scaffold14178 |
141388 |
141523 |
+ |
RS2426 |
Unspecified |
| scaffold14178 |
141631 |
141667 |
+ |
(TATTAT)n |
Simple_repeat |
| scaffold14178 |
141698 |
141876 |
+ |
RS1 |
Unspecified |
| scaffold14178 |
141868 |
142046 |
- |
RS155 |
Unspecified |
| scaffold14178 |
142778 |
142806 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold14178 |
142984 |
143227 |
+ |
RS11088 |
Unspecified |
| scaffold14178 |
144281 |
144343 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold14178 |
144389 |
144422 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
144589 |
144718 |
- |
HAT-N12_Mad |
DNA/hAT-Ac |
| scaffold14178 |
144931 |
145050 |
- |
RS100 |
Unspecified |
| scaffold14178 |
145431 |
145806 |
- |
RS1129 |
Unspecified |
| scaffold14178 |
146038 |
146239 |
+ |
RS2452 |
Unspecified |
| scaffold14178 |
146312 |
146615 |
- |
RS155 |
Unspecified |
| scaffold14178 |
147347 |
147375 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold14178 |
147553 |
147796 |
+ |
RS11088 |
Unspecified |
| scaffold14178 |
148844 |
148906 |
+ |
GA-rich |
Low_complexity |
| scaffold14178 |
149154 |
149266 |
- |
HAT-N12_Mad |
DNA/hAT-Ac |
| scaffold14178 |
149859 |
150117 |
+ |
RS11088 |
Unspecified |
| scaffold14178 |
150218 |
150237 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14178 |
151725 |
151780 |
- |
EnSpm-18_SBi |
DNA/CMC-EnSpm |
| scaffold14178 |
152177 |
152256 |
+ |
EnSpm-1_GM |
DNA/CMC-EnSpm |
| scaffold14178 |
152281 |
152325 |
+ |
(TAATTC)n |
Simple_repeat |
| scaffold14178 |
152338 |
152389 |
+ |
(TA)n |
Simple_repeat |
| scaffold14178 |
152668 |
152716 |
+ |
(TA)n |
Simple_repeat |
| scaffold14178 |
152750 |
152821 |
+ |
(CTAATT)n |
Simple_repeat |
| scaffold14178 |
153398 |
153422 |
+ |
(TGT)n |
Simple_repeat |
| scaffold14178 |
153425 |
153455 |
+ |
(TTC)n |
Simple_repeat |
| scaffold14178 |
153465 |
153532 |
+ |
(TTG)n |
Simple_repeat |
| scaffold14178 |
153630 |
153695 |
+ |
(GTTGTT)n |
Simple_repeat |
| scaffold14178 |
153958 |
154056 |
- |
Gypsy-3_PD-I |
LTR/Gypsy |
| scaffold14178 |
155240 |
155399 |
- |
RS2719 |
Unspecified |
| scaffold14178 |
155521 |
155757 |
- |
RS356 |
Unspecified |
| scaffold14178 |
156143 |
156167 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
156601 |
156638 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
156768 |
156819 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold14178 |
156905 |
156925 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
156935 |
157080 |
+ |
RS11551 |
Unspecified |
| scaffold14178 |
158666 |
158692 |
+ |
(C)n |
Simple_repeat |
| scaffold14178 |
160372 |
160686 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold14178 |
160480 |
160541 |
+ |
MuDR-4_Mad |
DNA/MULE-MuDR |
| scaffold14178 |
160689 |
160804 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold14178 |
160999 |
161061 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold14178 |
161963 |
162020 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold14178 |
162406 |
162466 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
162990 |
163079 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold14178 |
163303 |
163562 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold14178 |
165288 |
165326 |
+ |
(TATTTAG)n |
Simple_repeat |
| scaffold14178 |
166784 |
166813 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
166958 |
167586 |
- |
RS7533 |
Unspecified |
| scaffold14178 |
168286 |
168375 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
168636 |
168700 |
+ |
MuDR-12_GM |
DNA/MULE-MuDR |
| scaffold14178 |
169361 |
169485 |
- |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold14178 |
169913 |
169951 |
+ |
(TCATCC)n |
Simple_repeat |
| scaffold14178 |
170119 |
170181 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
170559 |
170587 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
170871 |
170910 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold14178 |
170988 |
171274 |
- |
RS527 |
Unspecified |
| scaffold14178 |
171753 |
171804 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
172174 |
172321 |
- |
RS328 |
Unspecified |
| scaffold14178 |
173037 |
173083 |
- |
RS11145 |
Unspecified |
| scaffold14178 |
173591 |
173624 |
+ |
(TATC)n |
Simple_repeat |
| scaffold14178 |
173870 |
174085 |
+ |
RS15482 |
Unspecified |
| scaffold14178 |
174387 |
174628 |
+ |
RS445 |
Unspecified |
| scaffold14178 |
176115 |
176179 |
+ |
RS64 |
Unspecified |
| scaffold14178 |
177311 |
177379 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold14178 |
177425 |
177448 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
177698 |
177872 |
+ |
RS648 |
Unspecified |
| scaffold14178 |
177845 |
178032 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
177963 |
178032 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
178863 |
182686 |
- |
RS337 |
Unspecified |
| scaffold14178 |
182857 |
184110 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold14178 |
183071 |
183860 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold14178 |
185228 |
185244 |
+ |
COP2_I_MT-int |
LTR/Copia |
| scaffold14178 |
185245 |
185354 |
+ |
ZhAT8_ZM |
DNA/hAT-Ac |
| scaffold14178 |
185355 |
185369 |
+ |
COP2_I_MT-int |
LTR/Copia |
| scaffold14178 |
185650 |
185875 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold14178 |
185857 |
186052 |
+ |
RS648 |
Unspecified |
| scaffold14178 |
186093 |
186113 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
187872 |
188129 |
+ |
RS47 |
Unspecified |
| scaffold14178 |
188096 |
188135 |
- |
RS47 |
Unspecified |
| scaffold14178 |
188132 |
188244 |
- |
RS7143 |
Unspecified |
| scaffold14178 |
188288 |
188331 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold14178 |
189378 |
189427 |
- |
RS8600 |
Unspecified |
| scaffold14178 |
191291 |
191335 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
191802 |
192049 |
+ |
ZhAT5_ZM |
DNA/hAT-Tip100 |
| scaffold14178 |
193389 |
193439 |
+ |
(CCGCC)n |
Simple_repeat |
| scaffold14178 |
193497 |
193528 |
+ |
(TTTATC)n |
Simple_repeat |
| scaffold14178 |
195507 |
195608 |
+ |
GA-rich |
Low_complexity |
| scaffold14178 |
195689 |
195763 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
196027 |
196168 |
+ |
RS2355 |
Unspecified |
| scaffold14178 |
196219 |
196264 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
197215 |
197366 |
+ |
RS9318 |
Unspecified |
| scaffold14178 |
197527 |
197560 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
197567 |
197707 |
- |
RS191 |
Unspecified |
| scaffold14178 |
198134 |
198171 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
198569 |
198720 |
+ |
RS6063 |
Unspecified |
| scaffold14178 |
198707 |
198836 |
- |
RS6063 |
Unspecified |
| scaffold14178 |
198862 |
198892 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14178 |
199028 |
199113 |
- |
RS18405 |
Unspecified |
| scaffold14178 |
199243 |
199263 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
199502 |
199559 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold14178 |
201962 |
202004 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold14178 |
202045 |
202292 |
- |
RS4 |
Unspecified |
| scaffold14178 |
202504 |
202527 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
203297 |
203788 |
- |
PL307 |
Unspecified |
| scaffold14178 |
203919 |
203971 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold14178 |
204207 |
204520 |
+ |
RS2386 |
Unspecified |
| scaffold14178 |
204207 |
204387 |
- |
RS41 |
Unspecified |
| scaffold14178 |
204388 |
204575 |
+ |
RS2386 |
Unspecified |
| scaffold14178 |
207068 |
207556 |
- |
PL307 |
Unspecified |
| scaffold14178 |
210912 |
210958 |
+ |
RS11145 |
Unspecified |
| scaffold14178 |
211259 |
211286 |
+ |
(AGAT)n |
Simple_repeat |
| scaffold14178 |
211339 |
211358 |
+ |
(GTG)n |
Simple_repeat |
| scaffold14178 |
212192 |
212365 |
+ |
RS43 |
Unspecified |
| scaffold14178 |
212379 |
212435 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold14178 |
212847 |
212959 |
+ |
RS14745 |
Unspecified |
| scaffold14178 |
213005 |
213241 |
+ |
RS2394 |
Unspecified |
| scaffold14178 |
213816 |
213838 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
213895 |
213918 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
214261 |
214534 |
+ |
RS106 |
Unspecified |
| scaffold14178 |
214916 |
216530 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold14178 |
216618 |
218086 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold14178 |
218271 |
218942 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14178 |
218349 |
218511 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold14178 |
219452 |
219471 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
219609 |
219629 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14178 |
219787 |
219806 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
220269 |
220412 |
- |
PL268 |
Unspecified |
| scaffold14178 |
220438 |
220472 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14178 |
220778 |
220809 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
221449 |
221652 |
- |
RS28 |
Unspecified |
| scaffold14178 |
228606 |
228656 |
+ |
(TGG)n |
Simple_repeat |
| scaffold14178 |
228766 |
228810 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14178 |
228766 |
229012 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14178 |
228798 |
229012 |
- |
PL753 |
Unspecified |
| scaffold14178 |
229319 |
229435 |
- |
RS17927 |
Unspecified |
| scaffold14178 |
229525 |
229572 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
229572 |
229758 |
+ |
RS2104 |
Unspecified |
| scaffold14178 |
229595 |
230197 |
+ |
RS6081 |
Unspecified |
| scaffold14178 |
230377 |
230443 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
230717 |
230746 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
231260 |
231432 |
+ |
PL24 |
Unspecified |
| scaffold14178 |
231420 |
231535 |
+ |
PL24 |
Unspecified |
| scaffold14178 |
233812 |
233838 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
234528 |
234568 |
+ |
Gypsy-29_VV-I |
LTR/Gypsy |
| scaffold14178 |
239151 |
239210 |
- |
Copia-19_BRa-I |
LTR/Copia |
| scaffold14178 |
239341 |
239434 |
- |
Gypsy-13_SMo-LTR |
LTR/Gypsy |
| scaffold14178 |
239451 |
239535 |
+ |
(ATCACG)n |
Simple_repeat |
| scaffold14178 |
240068 |
240084 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
240632 |
240658 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
240975 |
241015 |
+ |
(CAA)n |
Simple_repeat |
| scaffold14178 |
241228 |
241264 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold14178 |
242662 |
242700 |
+ |
(ACC)n |
Simple_repeat |
| scaffold14178 |
243213 |
243263 |
+ |
GA-rich |
Low_complexity |
| scaffold14178 |
245461 |
245489 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
245710 |
245805 |
- |
RS3146 |
Unspecified |
| scaffold14178 |
245710 |
245834 |
- |
RS18363 |
Unspecified |
| scaffold14178 |
246156 |
246182 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14178 |
249503 |
249523 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
250540 |
250577 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
250596 |
250637 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
251232 |
251275 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold14178 |
251778 |
251817 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14178 |
254605 |
254899 |
+ |
RS518 |
Unspecified |
| scaffold14178 |
255100 |
255130 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold14178 |
255769 |
255996 |
+ |
RS145 |
Unspecified |
| scaffold14178 |
256174 |
256207 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold14178 |
256305 |
256363 |
- |
RS15470 |
Unspecified |
| scaffold14178 |
257311 |
257356 |
- |
RS4475 |
Unspecified |
| scaffold14178 |
257548 |
257567 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
257880 |
257911 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
258282 |
258463 |
+ |
RS492 |
Unspecified |
| scaffold14178 |
258668 |
258709 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold14178 |
259035 |
259078 |
+ |
(ATA)n |
Simple_repeat |
| scaffold14178 |
259454 |
259707 |
+ |
RS145 |
Unspecified |
| scaffold14178 |
259885 |
259918 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold14178 |
260018 |
260076 |
- |
RS15470 |
Unspecified |
| scaffold14178 |
261099 |
261486 |
+ |
RS29 |
Unspecified |
| scaffold14178 |
261373 |
261504 |
- |
PL572 |
Unspecified |
| scaffold14178 |
262647 |
262679 |
+ |
(TA)n |
Simple_repeat |
| scaffold14178 |
263339 |
263427 |
+ |
ATRAN |
DNA? |
| scaffold14178 |
263373 |
263463 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold14178 |
263546 |
263568 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
263758 |
263819 |
+ |
(ATA)n |
Simple_repeat |
| scaffold14178 |
263831 |
263900 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14178 |
263901 |
264114 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14178 |
264800 |
264832 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
266162 |
266278 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14178 |
266445 |
266461 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
266737 |
266830 |
- |
RS12154 |
Unspecified |
| scaffold14178 |
266948 |
267133 |
- |
RS908 |
Unspecified |
| scaffold14178 |
268065 |
268161 |
+ |
Copia-69_GM-LTR |
LTR/Copia |
| scaffold14178 |
268291 |
268308 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
268403 |
268449 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14178 |
268526 |
268554 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold14178 |
268808 |
268981 |
- |
RS559 |
Unspecified |
| scaffold14178 |
268983 |
269018 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
268983 |
269056 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
269008 |
269056 |
- |
RS460 |
Unspecified |
| scaffold14178 |
269042 |
269246 |
+ |
RS22 |
Unspecified |
| scaffold14178 |
269268 |
269498 |
- |
RS460 |
Unspecified |
| scaffold14178 |
269508 |
269695 |
- |
EnSpm-N1_Mad |
DNA/CMC-EnSpm |
| scaffold14178 |
269697 |
270032 |
- |
RS8 |
Unspecified |
| scaffold14178 |
270491 |
270539 |
+ |
RS13424 |
Unspecified |
| scaffold14178 |
270497 |
270616 |
- |
RS13424 |
Unspecified |
| scaffold14178 |
270866 |
270909 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold14178 |
271206 |
271335 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold14178 |
271455 |
271476 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
271569 |
271716 |
+ |
RS1527 |
Unspecified |
| scaffold14178 |
271663 |
271741 |
+ |
RS319 |
Unspecified |
| scaffold14178 |
271686 |
271748 |
+ |
RS319 |
Unspecified |
| scaffold14178 |
273733 |
274231 |
+ |
RS319 |
Unspecified |
| scaffold14178 |
274250 |
274299 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold14178 |
274448 |
274575 |
+ |
RS12636 |
Unspecified |
| scaffold14178 |
275280 |
275385 |
+ |
RS8421 |
Unspecified |
| scaffold14178 |
275535 |
275713 |
+ |
RS10660 |
Unspecified |
| scaffold14178 |
275760 |
275932 |
+ |
RS11742 |
Unspecified |
| scaffold14178 |
276091 |
276178 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold14178 |
276555 |
276606 |
+ |
(TTGAATA)n |
Simple_repeat |
| scaffold14178 |
276689 |
276822 |
+ |
RS3312 |
Unspecified |
| scaffold14178 |
276823 |
276847 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
276962 |
276981 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
277071 |
277121 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold14178 |
277491 |
277589 |
+ |
RS4076 |
Unspecified |
| scaffold14178 |
277584 |
277695 |
+ |
RS15112 |
Unspecified |
| scaffold14178 |
277900 |
278002 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold14178 |
278264 |
278513 |
+ |
RS347 |
Unspecified |
| scaffold14178 |
278995 |
279037 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold14178 |
279648 |
279853 |
- |
PL560 |
Unspecified |
| scaffold14178 |
282726 |
282748 |
+ |
(A)n |
Simple_repeat |
| scaffold14178 |
283554 |
283697 |
- |
RS613 |
Unspecified |
| scaffold14178 |
283794 |
283841 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold14178 |
284609 |
284759 |
+ |
RS509 |
Unspecified |
| scaffold14178 |
284923 |
284960 |
+ |
(CAATTTT)n |
Simple_repeat |
| scaffold14178 |
285146 |
285176 |
+ |
(T)n |
Simple_repeat |
| scaffold14178 |
285318 |
285371 |
+ |
A-rich |
Low_complexity |
| scaffold14178 |
285784 |
285975 |
- |
RS4 |
Unspecified |