scaffold14194 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14194 |
1 |
245 |
+ |
PL203 |
Unspecified |
| scaffold14194 |
1132 |
1163 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
2119 |
2140 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
2207 |
2375 |
+ |
RS5 |
Unspecified |
| scaffold14194 |
2374 |
2449 |
+ |
RS5 |
Unspecified |
| scaffold14194 |
2659 |
2755 |
+ |
RS16382 |
Unspecified |
| scaffold14194 |
2918 |
3150 |
- |
RS1351 |
Unspecified |
| scaffold14194 |
3995 |
4082 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold14194 |
4301 |
4445 |
- |
PL422 |
Unspecified |
| scaffold14194 |
4852 |
4891 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
5430 |
5483 |
+ |
(TCACAAG)n |
Simple_repeat |
| scaffold14194 |
5935 |
6076 |
- |
RS1771 |
Unspecified |
| scaffold14194 |
6344 |
6470 |
- |
RS11849 |
Unspecified |
| scaffold14194 |
6544 |
6644 |
- |
RS2633 |
Unspecified |
| scaffold14194 |
6883 |
7391 |
+ |
RS1940 |
Unspecified |
| scaffold14194 |
7838 |
7865 |
+ |
(TATT)n |
Simple_repeat |
| scaffold14194 |
8015 |
8284 |
- |
RS586 |
Unspecified |
| scaffold14194 |
9112 |
9443 |
- |
RS10364 |
Unspecified |
| scaffold14194 |
9711 |
9735 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
9797 |
9939 |
+ |
RS115 |
Unspecified |
| scaffold14194 |
10000 |
10100 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
10189 |
10489 |
- |
RS2992 |
Unspecified |
| scaffold14194 |
10531 |
10712 |
+ |
RS79 |
Unspecified |
| scaffold14194 |
10925 |
10954 |
+ |
(TCAAAA)n |
Simple_repeat |
| scaffold14194 |
11669 |
11921 |
- |
RS1771 |
Unspecified |
| scaffold14194 |
11831 |
11945 |
+ |
RS8169 |
Unspecified |
| scaffold14194 |
12411 |
12428 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
12517 |
12638 |
- |
RS11849 |
Unspecified |
| scaffold14194 |
13016 |
13527 |
+ |
RS1940 |
Unspecified |
| scaffold14194 |
14181 |
14430 |
- |
RS145 |
Unspecified |
| scaffold14194 |
15182 |
15221 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
16257 |
16385 |
+ |
PL375 |
Unspecified |
| scaffold14194 |
16382 |
16454 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
16485 |
16562 |
+ |
(CCACCG)n |
Simple_repeat |
| scaffold14194 |
16630 |
16726 |
+ |
(CCA)n |
Simple_repeat |
| scaffold14194 |
16743 |
16828 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
17081 |
17156 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
17205 |
17419 |
+ |
RS13321 |
Unspecified |
| scaffold14194 |
17354 |
17622 |
+ |
PL688 |
Unspecified |
| scaffold14194 |
17919 |
18181 |
- |
PL688 |
Unspecified |
| scaffold14194 |
18450 |
18492 |
+ |
(TCAAAT)n |
Simple_repeat |
| scaffold14194 |
18610 |
18644 |
+ |
(CTC)n |
Simple_repeat |
| scaffold14194 |
19224 |
19482 |
- |
RS1771 |
Unspecified |
| scaffold14194 |
19392 |
19506 |
+ |
RS8169 |
Unspecified |
| scaffold14194 |
19527 |
19560 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold14194 |
20624 |
20734 |
- |
RS2633 |
Unspecified |
| scaffold14194 |
20928 |
21442 |
+ |
RS1940 |
Unspecified |
| scaffold14194 |
21989 |
22040 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold14194 |
22070 |
22153 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold14194 |
22218 |
22778 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
22756 |
22778 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
23463 |
24190 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold14194 |
24431 |
25305 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold14194 |
25495 |
25610 |
- |
RS333 |
Unspecified |
| scaffold14194 |
25537 |
25707 |
- |
RS573 |
Unspecified |
| scaffold14194 |
25940 |
26045 |
+ |
RS13285 |
Unspecified |
| scaffold14194 |
27161 |
27416 |
- |
RS1771 |
Unspecified |
| scaffold14194 |
27835 |
27878 |
+ |
(CTAGGACA)n |
Simple_repeat |
| scaffold14194 |
28869 |
29379 |
+ |
RS1940 |
Unspecified |
| scaffold14194 |
29985 |
30076 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
32265 |
32334 |
+ |
(TA)n |
Simple_repeat |
| scaffold14194 |
32363 |
33201 |
- |
RS4526 |
Unspecified |
| scaffold14194 |
33258 |
33289 |
+ |
GA-rich |
Low_complexity |
| scaffold14194 |
33628 |
33879 |
- |
PL48 |
Unspecified |
| scaffold14194 |
33981 |
34470 |
- |
PL117 |
Unspecified |
| scaffold14194 |
34523 |
34557 |
+ |
(CACT)n |
Simple_repeat |
| scaffold14194 |
34650 |
34688 |
+ |
(AATTCA)n |
Simple_repeat |
| scaffold14194 |
34785 |
34824 |
+ |
(CCT)n |
Simple_repeat |
| scaffold14194 |
35413 |
35670 |
- |
RS1771 |
Unspecified |
| scaffold14194 |
36297 |
36315 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
36829 |
36940 |
- |
RS2633 |
Unspecified |
| scaffold14194 |
37134 |
37648 |
+ |
RS1940 |
Unspecified |
| scaffold14194 |
38578 |
38747 |
- |
RS573 |
Unspecified |
| scaffold14194 |
38891 |
38953 |
+ |
(CAAGT)n |
Simple_repeat |
| scaffold14194 |
39234 |
40187 |
- |
PL526 |
Unspecified |
| scaffold14194 |
40409 |
40514 |
+ |
RS13285 |
Unspecified |
| scaffold14194 |
41092 |
41156 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14194 |
41512 |
41658 |
+ |
RS10474 |
Unspecified |
| scaffold14194 |
43107 |
43144 |
+ |
GA-rich |
Low_complexity |
| scaffold14194 |
43840 |
43895 |
+ |
GA-rich |
Low_complexity |
| scaffold14194 |
44327 |
45409 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14194 |
45410 |
45454 |
+ |
Copia-15_CP-I |
LTR/Copia |
| scaffold14194 |
45422 |
45459 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold14194 |
45574 |
45632 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold14194 |
45714 |
45766 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold14194 |
45932 |
46835 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold14194 |
47172 |
48740 |
+ |
Copia-16_CP-I |
LTR/Copia |
| scaffold14194 |
48894 |
48951 |
+ |
GA-rich |
Low_complexity |
| scaffold14194 |
49168 |
49201 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold14194 |
50707 |
50756 |
+ |
(TAACTC)n |
Simple_repeat |
| scaffold14194 |
50978 |
51014 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14194 |
51105 |
51128 |
+ |
(TTC)n |
Simple_repeat |
| scaffold14194 |
51426 |
51527 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold14194 |
52654 |
52800 |
- |
RS10474 |
Unspecified |
| scaffold14194 |
55554 |
55661 |
- |
RS1856 |
Unspecified |
| scaffold14194 |
56396 |
56636 |
- |
RS138 |
Unspecified |
| scaffold14194 |
65916 |
65934 |
+ |
(CAG)n |
Simple_repeat |
| scaffold14194 |
66217 |
66278 |
+ |
(TGAAGA)n |
Simple_repeat |
| scaffold14194 |
66956 |
67069 |
- |
PL375 |
Unspecified |
| scaffold14194 |
67451 |
67471 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
67526 |
67612 |
+ |
(GGT)n |
Simple_repeat |
| scaffold14194 |
67810 |
67924 |
- |
RS12449 |
Unspecified |
| scaffold14194 |
67825 |
67936 |
+ |
RS4475 |
Unspecified |
| scaffold14194 |
68294 |
68330 |
+ |
(ATAATAT)n |
Simple_repeat |
| scaffold14194 |
68952 |
69160 |
+ |
PL201 |
Unspecified |
| scaffold14194 |
71151 |
71339 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14194 |
71585 |
71644 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
72214 |
72511 |
- |
PL306 |
Unspecified |
| scaffold14194 |
72360 |
72551 |
- |
RS163 |
Unspecified |
| scaffold14194 |
73130 |
73203 |
+ |
(CGTGC)n |
Simple_repeat |
| scaffold14194 |
73255 |
73280 |
+ |
(CGTGC)n |
Simple_repeat |
| scaffold14194 |
74437 |
74463 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
74571 |
74616 |
+ |
(AAGATTT)n |
Simple_repeat |
| scaffold14194 |
74698 |
74738 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
75454 |
75481 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
75969 |
75999 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
77696 |
77735 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
78050 |
78072 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
78226 |
78271 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
78278 |
78498 |
- |
RS5556 |
Unspecified |
| scaffold14194 |
78498 |
78534 |
- |
RS622 |
Unspecified |
| scaffold14194 |
78731 |
78769 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14194 |
79449 |
79488 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
79554 |
79595 |
+ |
(AATGTAA)n |
Simple_repeat |
| scaffold14194 |
80538 |
80730 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold14194 |
81130 |
81167 |
+ |
(TTTTCGT)n |
Simple_repeat |
| scaffold14194 |
83036 |
83272 |
+ |
RS4292 |
Unspecified |
| scaffold14194 |
83298 |
84010 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold14194 |
84014 |
84137 |
- |
RS3778 |
Unspecified |
| scaffold14194 |
84720 |
85156 |
+ |
RS5333 |
Unspecified |
| scaffold14194 |
85448 |
85483 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
85535 |
85862 |
- |
RS210 |
Unspecified |
| scaffold14194 |
86071 |
86089 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
87403 |
87454 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
88640 |
88662 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
89310 |
89855 |
+ |
RS532 |
Unspecified |
| scaffold14194 |
89858 |
89892 |
+ |
(AAATAA)n |
Simple_repeat |
| scaffold14194 |
89924 |
90189 |
+ |
RS10 |
Unspecified |
| scaffold14194 |
90214 |
90253 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
91286 |
91318 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
92586 |
93673 |
+ |
Copia-82_GM-I |
LTR/Copia |
| scaffold14194 |
94002 |
94803 |
+ |
Copia-82_GM-I |
LTR/Copia |
| scaffold14194 |
94818 |
95027 |
- |
PL793 |
Unspecified |
| scaffold14194 |
97328 |
97504 |
+ |
RS15131 |
Unspecified |
| scaffold14194 |
97862 |
97968 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
98082 |
98180 |
+ |
RS1182 |
Unspecified |
| scaffold14194 |
98186 |
98295 |
+ |
RS7302 |
Unspecified |
| scaffold14194 |
98420 |
98517 |
+ |
RS7841 |
Unspecified |
| scaffold14194 |
98821 |
98855 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
100067 |
100265 |
+ |
RS209 |
Unspecified |
| scaffold14194 |
100425 |
100443 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
100503 |
100537 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
101124 |
101309 |
- |
RS73 |
Unspecified |
| scaffold14194 |
101416 |
101437 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
101819 |
102102 |
- |
RS1155 |
Unspecified |
| scaffold14194 |
101892 |
102274 |
- |
RS73 |
Unspecified |
| scaffold14194 |
102338 |
102512 |
+ |
RS17860 |
Unspecified |
| scaffold14194 |
102682 |
102846 |
- |
RS915 |
Unspecified |
| scaffold14194 |
104024 |
104290 |
- |
RS41 |
Unspecified |
| scaffold14194 |
104334 |
104481 |
- |
RS54 |
Unspecified |
| scaffold14194 |
105800 |
105834 |
+ |
(AT)n |
Simple_repeat |
| scaffold14194 |
106157 |
106196 |
+ |
(ATA)n |
Simple_repeat |
| scaffold14194 |
106753 |
106793 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
107319 |
107516 |
+ |
PL523 |
Unspecified |
| scaffold14194 |
107788 |
107831 |
+ |
(AATAGA)n |
Simple_repeat |
| scaffold14194 |
107909 |
107988 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
108230 |
108465 |
+ |
RS2558 |
Unspecified |
| scaffold14194 |
108471 |
108943 |
+ |
Gypsy-34_Mad-I |
LTR/Gypsy |
| scaffold14194 |
109099 |
109132 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
110690 |
110746 |
+ |
(GTGAGA)n |
Simple_repeat |
| scaffold14194 |
111124 |
111229 |
+ |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold14194 |
111234 |
111303 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
113429 |
113701 |
+ |
RS10 |
Unspecified |
| scaffold14194 |
115728 |
115762 |
+ |
(TGTCT)n |
Simple_repeat |
| scaffold14194 |
117200 |
117245 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold14194 |
121767 |
122026 |
- |
RS356 |
Unspecified |
| scaffold14194 |
122027 |
122095 |
+ |
RS581 |
Unspecified |
| scaffold14194 |
122073 |
122322 |
- |
RS356 |
Unspecified |
| scaffold14194 |
122975 |
123033 |
+ |
GA-rich |
Low_complexity |
| scaffold14194 |
123406 |
123450 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold14194 |
123460 |
123485 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
123762 |
123790 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14194 |
123791 |
123829 |
+ |
(TGT)n |
Simple_repeat |
| scaffold14194 |
123830 |
123849 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14194 |
126814 |
126974 |
+ |
RS12287 |
Unspecified |
| scaffold14194 |
127935 |
128088 |
- |
Copia-37_GM-I |
LTR/Copia |
| scaffold14194 |
128378 |
128439 |
+ |
(GCTCGG)n |
Simple_repeat |
| scaffold14194 |
128529 |
128570 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14194 |
129476 |
132850 |
- |
Copia-37_GM-I |
LTR/Copia |
| scaffold14194 |
133055 |
133771 |
- |
Copia-37_GM-I |
LTR/Copia |
| scaffold14194 |
134338 |
134599 |
- |
PL40 |
Unspecified |
| scaffold14194 |
134627 |
134721 |
- |
RS626 |
Unspecified |
| scaffold14194 |
135236 |
135258 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
135599 |
135622 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
143418 |
143491 |
+ |
GA-rich |
Low_complexity |
| scaffold14194 |
143551 |
143992 |
- |
PL2 |
Unspecified |
| scaffold14194 |
144016 |
144111 |
+ |
RS1018 |
Unspecified |
| scaffold14194 |
144116 |
144191 |
- |
RS177 |
Unspecified |
| scaffold14194 |
145654 |
145688 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
146038 |
146099 |
+ |
(TATATTT)n |
Simple_repeat |
| scaffold14194 |
146279 |
146349 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold14194 |
146989 |
147031 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
147128 |
147219 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold14194 |
147360 |
147384 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14194 |
147577 |
147646 |
- |
RS796 |
Unspecified |
| scaffold14194 |
147652 |
147907 |
+ |
RS533 |
Unspecified |
| scaffold14194 |
148133 |
148443 |
+ |
PL470 |
Unspecified |
| scaffold14194 |
149096 |
149481 |
+ |
RS160 |
Unspecified |
| scaffold14194 |
149518 |
149598 |
+ |
RS13832 |
Unspecified |
| scaffold14194 |
151503 |
151760 |
- |
RS47 |
Unspecified |
| scaffold14194 |
152013 |
152056 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
152199 |
152253 |
+ |
(AGACCC)n |
Simple_repeat |
| scaffold14194 |
152293 |
152333 |
+ |
(GGGTC)n |
Simple_repeat |
| scaffold14194 |
152475 |
152519 |
+ |
(AT)n |
Simple_repeat |
| scaffold14194 |
152885 |
153362 |
- |
PL271 |
Unspecified |
| scaffold14194 |
154050 |
154097 |
+ |
(TGTATTT)n |
Simple_repeat |
| scaffold14194 |
154098 |
154126 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
154980 |
155064 |
+ |
RS13929 |
Unspecified |
| scaffold14194 |
155120 |
155148 |
+ |
(AT)n |
Simple_repeat |
| scaffold14194 |
156157 |
156178 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
156459 |
156527 |
+ |
(TA)n |
Simple_repeat |
| scaffold14194 |
156459 |
156623 |
+ |
(TA)n |
Simple_repeat |
| scaffold14194 |
156511 |
156623 |
- |
RS212 |
Unspecified |
| scaffold14194 |
156702 |
156725 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
157051 |
157119 |
+ |
RS7706 |
Unspecified |
| scaffold14194 |
157227 |
157245 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
157520 |
157572 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14194 |
158295 |
158857 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14194 |
158295 |
158449 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14194 |
158429 |
158857 |
+ |
PL729 |
Unspecified |
| scaffold14194 |
158897 |
158959 |
+ |
(GAAGTTTTCT)n |
Simple_repeat |
| scaffold14194 |
159152 |
159376 |
- |
RS257 |
Unspecified |
| scaffold14194 |
159368 |
160151 |
- |
RS257 |
Unspecified |
| scaffold14194 |
160277 |
160321 |
+ |
(CTT)n |
Simple_repeat |
| scaffold14194 |
160439 |
160472 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14194 |
160614 |
160663 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold14194 |
160776 |
160872 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold14194 |
160921 |
160997 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
162193 |
162330 |
+ |
RS7706 |
Unspecified |
| scaffold14194 |
162912 |
163027 |
- |
RS10826 |
Unspecified |
| scaffold14194 |
165156 |
165226 |
+ |
(ATATTAT)n |
Simple_repeat |
| scaffold14194 |
165156 |
165320 |
+ |
(ATATTAT)n |
Simple_repeat |
| scaffold14194 |
165210 |
165320 |
- |
RS212 |
Unspecified |
| scaffold14194 |
165438 |
165880 |
- |
RS1868 |
Unspecified |
| scaffold14194 |
165893 |
166099 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14194 |
166246 |
166434 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14194 |
166904 |
167135 |
- |
RS1298 |
Unspecified |
| scaffold14194 |
167382 |
167407 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
167408 |
167426 |
+ |
(TTTTTCT)n |
Simple_repeat |
| scaffold14194 |
170529 |
170547 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
178561 |
178595 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
178596 |
178610 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14194 |
183670 |
183794 |
- |
SZ-25_LTR |
LTR/Copia |
| scaffold14194 |
184890 |
185168 |
+ |
PL806 |
Unspecified |
| scaffold14194 |
185040 |
185274 |
+ |
RS6805 |
Unspecified |
| scaffold14194 |
185254 |
185624 |
+ |
PL309 |
Unspecified |
| scaffold14194 |
186185 |
186233 |
+ |
(ATTATTG)n |
Simple_repeat |
| scaffold14194 |
186234 |
186263 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold14194 |
186480 |
186710 |
+ |
RS18 |
Unspecified |
| scaffold14194 |
186843 |
186984 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold14194 |
187135 |
187247 |
+ |
RS285 |
Unspecified |
| scaffold14194 |
187512 |
187968 |
- |
PL567 |
Unspecified |
| scaffold14194 |
188580 |
188628 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold14194 |
189142 |
189177 |
+ |
(TCGTG)n |
Simple_repeat |
| scaffold14194 |
189234 |
189443 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14194 |
189842 |
189931 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold14194 |
190291 |
190347 |
- |
SHAMUDRAV_MT |
DNA/MULE-MuDR |
| scaffold14194 |
190348 |
190483 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold14194 |
190484 |
190658 |
- |
SHAMUDRAV_MT |
DNA/MULE-MuDR |
| scaffold14194 |
190505 |
190743 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14194 |
190535 |
190785 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold14194 |
191078 |
191111 |
+ |
(AATTAC)n |
Simple_repeat |
| scaffold14194 |
191112 |
191211 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14194 |
191211 |
191737 |
+ |
RS1908 |
Unspecified |
| scaffold14194 |
191841 |
191946 |
+ |
RS9951 |
Unspecified |
| scaffold14194 |
191920 |
192039 |
- |
RS9999 |
Unspecified |
| scaffold14194 |
192119 |
192178 |
+ |
RS2334 |
Unspecified |
| scaffold14194 |
192174 |
192334 |
- |
RS892 |
Unspecified |
| scaffold14194 |
192322 |
192444 |
+ |
RS5131 |
Unspecified |
| scaffold14194 |
193150 |
193253 |
+ |
RS7796 |
Unspecified |
| scaffold14194 |
193259 |
193305 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
193319 |
193567 |
- |
RS4874 |
Unspecified |
| scaffold14194 |
193667 |
193732 |
+ |
(ATTGAA)n |
Simple_repeat |
| scaffold14194 |
194058 |
194175 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14194 |
194192 |
194302 |
+ |
(AAAACTTCAG)n |
Simple_repeat |
| scaffold14194 |
194754 |
194816 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold14194 |
195656 |
195679 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
195928 |
195992 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
196954 |
196971 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
197413 |
197445 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
197995 |
198020 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
198730 |
198755 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold14194 |
198756 |
198844 |
- |
RS9348 |
Unspecified |
| scaffold14194 |
199773 |
199826 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold14194 |
200226 |
200279 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14194 |
200425 |
200439 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14194 |
200440 |
200466 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
200535 |
200654 |
- |
RS1056 |
Unspecified |
| scaffold14194 |
200852 |
200884 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14194 |
201728 |
201828 |
+ |
RS4475 |
Unspecified |
| scaffold14194 |
201732 |
201845 |
- |
RS17262 |
Unspecified |
| scaffold14194 |
201967 |
202012 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold14194 |
202078 |
202139 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
202452 |
202478 |
+ |
(AT)n |
Simple_repeat |
| scaffold14194 |
202781 |
202800 |
+ |
(TATT)n |
Simple_repeat |
| scaffold14194 |
202998 |
203015 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
203914 |
203944 |
+ |
(CCTC)n |
Simple_repeat |
| scaffold14194 |
204039 |
204075 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
204144 |
204217 |
+ |
(CGA)n |
Simple_repeat |
| scaffold14194 |
204487 |
204533 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
205270 |
205292 |
- |
CACTA_LP |
DNA/En-Spm |
| scaffold14194 |
205293 |
205351 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold14194 |
205645 |
205681 |
+ |
(AATT)n |
Simple_repeat |
| scaffold14194 |
208724 |
208752 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
209760 |
209821 |
+ |
(ATA)n |
Simple_repeat |
| scaffold14194 |
210549 |
210559 |
+ |
EnSpm-43_SBi |
DNA/CMC-EnSpm |
| scaffold14194 |
210560 |
210590 |
+ |
Sat-1_CPa |
Satellite |
| scaffold14194 |
210591 |
210690 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14194 |
210847 |
210897 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold14194 |
211014 |
211060 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14194 |
211176 |
211329 |
+ |
RS452 |
Unspecified |
| scaffold14194 |
211477 |
211513 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold14194 |
212412 |
212440 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
212868 |
212931 |
+ |
(TTACAA)n |
Simple_repeat |
| scaffold14194 |
213022 |
213735 |
- |
RS1006 |
Unspecified |
| scaffold14194 |
214354 |
214386 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
215609 |
215639 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
216572 |
216676 |
+ |
RS17 |
Unspecified |
| scaffold14194 |
218410 |
218487 |
- |
RS13610 |
Unspecified |
| scaffold14194 |
218435 |
218505 |
- |
PL517 |
Unspecified |
| scaffold14194 |
219256 |
219471 |
- |
RS1178 |
Unspecified |
| scaffold14194 |
219594 |
219723 |
- |
RS8302 |
Unspecified |
| scaffold14194 |
219866 |
219900 |
+ |
(TCA)n |
Simple_repeat |
| scaffold14194 |
220122 |
220298 |
- |
RS845 |
Unspecified |
| scaffold14194 |
220122 |
220340 |
+ |
RS6229 |
Unspecified |
| scaffold14194 |
220274 |
220607 |
+ |
RS1178 |
Unspecified |
| scaffold14194 |
221203 |
221245 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold14194 |
221414 |
221436 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14194 |
221448 |
221486 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold14194 |
224781 |
224841 |
+ |
(AACA)n |
Simple_repeat |
| scaffold14194 |
225887 |
225946 |
+ |
(GGACC)n |
Simple_repeat |
| scaffold14194 |
225947 |
225971 |
+ |
(GGTCC)n |
Simple_repeat |
| scaffold14194 |
226050 |
226241 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold14194 |
226537 |
226623 |
- |
RS12885 |
Unspecified |
| scaffold14194 |
226553 |
226646 |
+ |
RS16382 |
Unspecified |
| scaffold14194 |
226635 |
226714 |
+ |
PL577 |
Unspecified |
| scaffold14194 |
226645 |
227037 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold14194 |
227003 |
227037 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold14194 |
227290 |
227330 |
+ |
(CAC)n |
Simple_repeat |
| scaffold14194 |
227550 |
227592 |
+ |
(TTTGTTT)n |
Simple_repeat |
| scaffold14194 |
229555 |
229615 |
+ |
(CCCTT)n |
Simple_repeat |
| scaffold14194 |
233784 |
233970 |
+ |
RS128 |
Unspecified |
| scaffold14194 |
234013 |
234320 |
+ |
PL9 |
Unspecified |
| scaffold14194 |
235257 |
235288 |
+ |
(TTTCT)n |
Simple_repeat |
| scaffold14194 |
235896 |
235937 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
235938 |
235946 |
+ |
(TATTTTT)n |
Simple_repeat |
| scaffold14194 |
236780 |
236922 |
+ |
RS12449 |
Unspecified |
| scaffold14194 |
237401 |
237515 |
- |
RS682 |
Unspecified |
| scaffold14194 |
237541 |
237667 |
+ |
RS17591 |
Unspecified |
| scaffold14194 |
237990 |
238022 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold14194 |
239218 |
239492 |
- |
RS17600 |
Unspecified |
| scaffold14194 |
239641 |
239676 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
239819 |
239854 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
240507 |
240529 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
240621 |
240638 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
240973 |
241210 |
+ |
RS145 |
Unspecified |
| scaffold14194 |
241556 |
241579 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
241737 |
241848 |
+ |
RS47 |
Unspecified |
| scaffold14194 |
241850 |
241942 |
- |
RS16831 |
Unspecified |
| scaffold14194 |
242092 |
242204 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
242731 |
242948 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14194 |
242978 |
243025 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14194 |
243758 |
243801 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold14194 |
244680 |
244739 |
+ |
(TGTATG)n |
Simple_repeat |
| scaffold14194 |
246009 |
246078 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14194 |
246079 |
246104 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
246105 |
246137 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14194 |
246873 |
247325 |
+ |
RS463 |
Unspecified |
| scaffold14194 |
247534 |
248120 |
+ |
PL8 |
Unspecified |
| scaffold14194 |
248304 |
248325 |
+ |
(ACC)n |
Simple_repeat |
| scaffold14194 |
258706 |
258951 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14194 |
258952 |
259007 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
259140 |
259338 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold14194 |
260130 |
260209 |
- |
RS4612 |
Unspecified |
| scaffold14194 |
260210 |
260319 |
- |
RS952 |
Unspecified |
| scaffold14194 |
260314 |
260418 |
- |
RS2501 |
Unspecified |
| scaffold14194 |
260484 |
260761 |
- |
RS952 |
Unspecified |
| scaffold14194 |
260763 |
260887 |
- |
RS4612 |
Unspecified |
| scaffold14194 |
265841 |
265975 |
+ |
RS12255 |
Unspecified |
| scaffold14194 |
266718 |
267011 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold14194 |
267525 |
267610 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14194 |
267603 |
267712 |
+ |
RS112 |
Unspecified |
| scaffold14194 |
267736 |
268117 |
+ |
MuDR-7_VV |
DNA/MULE-MuDR |
| scaffold14194 |
268333 |
269616 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold14194 |
269795 |
270111 |
- |
RS7047 |
Unspecified |
| scaffold14194 |
270276 |
270987 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold14194 |
270928 |
270987 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold14194 |
271027 |
271076 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold14194 |
271767 |
271801 |
+ |
(ATATAT)n |
Simple_repeat |
| scaffold14194 |
271793 |
271860 |
+ |
(ATA)n |
Simple_repeat |
| scaffold14194 |
271996 |
272034 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold14194 |
272984 |
273044 |
+ |
(TT)n |
Simple_repeat |
| scaffold14194 |
273913 |
273944 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
274067 |
274127 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
274668 |
274705 |
+ |
(CGTGTC)n |
Simple_repeat |
| scaffold14194 |
274889 |
275208 |
- |
RS2543 |
Unspecified |
| scaffold14194 |
275357 |
275380 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
275418 |
275442 |
+ |
(TCT)n |
Simple_repeat |
| scaffold14194 |
279823 |
279925 |
+ |
RS14689 |
Unspecified |
| scaffold14194 |
280748 |
280887 |
+ |
RS12255 |
Unspecified |
| scaffold14194 |
283019 |
283246 |
- |
RS4 |
Unspecified |
| scaffold14194 |
283258 |
283599 |
- |
RS1716 |
Unspecified |
| scaffold14194 |
283558 |
284022 |
+ |
RS297 |
Unspecified |
| scaffold14194 |
283893 |
284256 |
- |
RS6405 |
Unspecified |
| scaffold14194 |
284255 |
284298 |
+ |
(TATTATT)n |
Simple_repeat |
| scaffold14194 |
285191 |
285231 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold14194 |
285853 |
285896 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold14194 |
286272 |
286315 |
+ |
(ACT)n |
Simple_repeat |
| scaffold14194 |
286428 |
286459 |
+ |
(TCT)n |
Simple_repeat |
| scaffold14194 |
286590 |
287019 |
+ |
PL494 |
Unspecified |
| scaffold14194 |
286640 |
287289 |
- |
PL919 |
Unspecified |
| scaffold14194 |
287302 |
287780 |
- |
PL350 |
Unspecified |
| scaffold14194 |
287829 |
287868 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold14194 |
287922 |
288458 |
+ |
PL628 |
Unspecified |
| scaffold14194 |
287929 |
288607 |
- |
PL229 |
Unspecified |
| scaffold14194 |
289569 |
290140 |
+ |
RS274 |
Unspecified |
| scaffold14194 |
290509 |
291193 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold14194 |
291490 |
292971 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold14194 |
293272 |
294828 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold14194 |
295689 |
295726 |
- |
RS1 |
Unspecified |
| scaffold14194 |
295695 |
295829 |
+ |
RS1848 |
Unspecified |
| scaffold14194 |
295912 |
295941 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold14194 |
296357 |
296390 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold14194 |
296413 |
296468 |
+ |
(TTAATTT)n |
Simple_repeat |
| scaffold14194 |
297020 |
297150 |
+ |
RS1 |
Unspecified |
| scaffold14194 |
297513 |
297776 |
- |
RS365 |
Unspecified |
| scaffold14194 |
302100 |
302202 |
+ |
RS14689 |
Unspecified |
| scaffold14194 |
303298 |
303318 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
303321 |
303456 |
+ |
RS12255 |
Unspecified |
| scaffold14194 |
304671 |
304693 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
305711 |
305777 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold14194 |
306024 |
306049 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
306050 |
306056 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold14194 |
306152 |
306318 |
+ |
RS620 |
Unspecified |
| scaffold14194 |
306233 |
306455 |
- |
RS1062 |
Unspecified |
| scaffold14194 |
307075 |
307458 |
- |
PL582 |
Unspecified |
| scaffold14194 |
307886 |
307997 |
+ |
PL582 |
Unspecified |
| scaffold14194 |
308132 |
308392 |
+ |
RS26 |
Unspecified |
| scaffold14194 |
308562 |
308578 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
315318 |
315367 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
315541 |
315570 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
317664 |
317725 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
318118 |
318152 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
321147 |
321181 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
324013 |
324040 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
325341 |
325657 |
- |
PL480 |
Unspecified |
| scaffold14194 |
326130 |
326502 |
+ |
PL469 |
Unspecified |
| scaffold14194 |
326901 |
326922 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
327004 |
327030 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold14194 |
327379 |
327404 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
327531 |
327621 |
- |
RS972 |
Unspecified |
| scaffold14194 |
328073 |
328242 |
+ |
RS421 |
Unspecified |
| scaffold14194 |
328175 |
328297 |
- |
RS573 |
Unspecified |
| scaffold14194 |
333825 |
333843 |
+ |
(T)n |
Simple_repeat |
| scaffold14194 |
336954 |
337019 |
+ |
(CGG)n |
Simple_repeat |
| scaffold14194 |
337668 |
337850 |
+ |
RS240 |
Unspecified |
| scaffold14194 |
338743 |
338758 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
338759 |
338787 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
338788 |
338801 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
340445 |
340489 |
+ |
(CAA)n |
Simple_repeat |
| scaffold14194 |
344546 |
344591 |
+ |
RLG_scMaximus_3_1-I |
LTR/Copia |
| scaffold14194 |
347440 |
347557 |
+ |
(CCG)n |
Simple_repeat |
| scaffold14194 |
347910 |
347964 |
+ |
(AATTTTG)n |
Simple_repeat |
| scaffold14194 |
348531 |
348578 |
+ |
(TA)n |
Simple_repeat |
| scaffold14194 |
349451 |
349582 |
+ |
RS1954 |
Unspecified |
| scaffold14194 |
349588 |
349615 |
+ |
(A)n |
Simple_repeat |
| scaffold14194 |
350983 |
351033 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold14194 |
351206 |
351308 |
+ |
RS15470 |
Unspecified |
| scaffold14194 |
351450 |
351490 |
+ |
(AGTTG)n |
Simple_repeat |
| scaffold14194 |
351974 |
352007 |
+ |
RS459 |
Unspecified |
| scaffold14194 |
352086 |
352124 |
+ |
A-rich |
Low_complexity |
| scaffold14194 |
352252 |
352337 |
+ |
PL77 |
Unspecified |
| scaffold14194 |
352448 |
352976 |
+ |
PL102 |
Unspecified |
| scaffold14194 |
353630 |
353654 |
+ |
(ACG)n |
Simple_repeat |
| scaffold14194 |
354152 |
354265 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold14194 |
357773 |
357799 |
+ |
(TCCTT)n |
Simple_repeat |
| scaffold14194 |
359162 |
359186 |
+ |
(CAT)n |
Simple_repeat |
| scaffold14194 |
359574 |
359605 |
+ |
(GTCGGT)n |
Simple_repeat |
| scaffold14194 |
359679 |
359703 |
+ |
(TGTG)n |
Simple_repeat |