scaffold1505 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1505 |
2 |
477 |
+ |
PL904 |
Unspecified |
| scaffold1505 |
830 |
866 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold1505 |
3096 |
3126 |
+ |
(TA)n |
Simple_repeat |
| scaffold1505 |
3643 |
3681 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1505 |
4542 |
4618 |
+ |
(AAGATGA)n |
Simple_repeat |
| scaffold1505 |
4857 |
5424 |
+ |
PL296 |
Unspecified |
| scaffold1505 |
6439 |
6474 |
+ |
Vandal3 |
DNA/MULE-MuDR |
| scaffold1505 |
6699 |
6980 |
+ |
RS14585 |
Unspecified |
| scaffold1505 |
7634 |
7770 |
+ |
RS512 |
Unspecified |
| scaffold1505 |
7749 |
7890 |
+ |
RS512 |
Unspecified |
| scaffold1505 |
8008 |
8168 |
- |
RS275 |
Unspecified |
| scaffold1505 |
8252 |
8331 |
+ |
RS18405 |
Unspecified |
| scaffold1505 |
8252 |
8321 |
+ |
RS549 |
Unspecified |
| scaffold1505 |
8943 |
9082 |
+ |
RS18037 |
Unspecified |
| scaffold1505 |
9692 |
9808 |
+ |
RS13652 |
Unspecified |
| scaffold1505 |
10006 |
10034 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
10340 |
10532 |
+ |
RS12998 |
Unspecified |
| scaffold1505 |
10639 |
10950 |
- |
RS11632 |
Unspecified |
| scaffold1505 |
12006 |
12175 |
+ |
RS2711 |
Unspecified |
| scaffold1505 |
12197 |
12244 |
- |
Copia-80_PT-I |
LTR/Copia |
| scaffold1505 |
12464 |
12520 |
+ |
hAT-12_VVi |
DNA/hAT-Tag1 |
| scaffold1505 |
12636 |
12641 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold1505 |
12642 |
12710 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold1505 |
12711 |
12716 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold1505 |
12894 |
12944 |
+ |
(ACGGTG)n |
Simple_repeat |
| scaffold1505 |
12942 |
12973 |
+ |
(TGA)n |
Simple_repeat |
| scaffold1505 |
13200 |
13289 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
13200 |
13238 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
13222 |
13289 |
+ |
PL597 |
Unspecified |
| scaffold1505 |
13297 |
13443 |
+ |
RS2100 |
Unspecified |
| scaffold1505 |
13373 |
13886 |
+ |
RS2015 |
Unspecified |
| scaffold1505 |
13811 |
13980 |
+ |
RS2711 |
Unspecified |
| scaffold1505 |
14022 |
14150 |
- |
RS663 |
Unspecified |
| scaffold1505 |
14324 |
14396 |
+ |
RS4 |
Unspecified |
| scaffold1505 |
14515 |
14684 |
- |
RS3973 |
Unspecified |
| scaffold1505 |
16372 |
16863 |
- |
PL169 |
Unspecified |
| scaffold1505 |
16863 |
17046 |
+ |
RS3574 |
Unspecified |
| scaffold1505 |
17783 |
17826 |
+ |
(AACT)n |
Simple_repeat |
| scaffold1505 |
17915 |
17974 |
+ |
(ATCCTAA)n |
Simple_repeat |
| scaffold1505 |
18532 |
18763 |
- |
RS7237 |
Unspecified |
| scaffold1505 |
19268 |
19298 |
+ |
(AACCCG)n |
Simple_repeat |
| scaffold1505 |
19871 |
19888 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
21178 |
21421 |
+ |
RS10531 |
Unspecified |
| scaffold1505 |
21369 |
21830 |
+ |
RS4683 |
Unspecified |
| scaffold1505 |
21734 |
22027 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1505 |
21983 |
22027 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1505 |
22158 |
22577 |
+ |
RS5045 |
Unspecified |
| scaffold1505 |
22708 |
23093 |
- |
RS5695 |
Unspecified |
| scaffold1505 |
22938 |
23201 |
- |
RS5612 |
Unspecified |
| scaffold1505 |
23658 |
23702 |
+ |
Gypsy-9_BD-I |
LTR/Gypsy |
| scaffold1505 |
24302 |
24338 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
24433 |
24438 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold1505 |
24439 |
24461 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
24462 |
24469 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold1505 |
25035 |
25055 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
25350 |
25592 |
- |
RS4 |
Unspecified |
| scaffold1505 |
25707 |
25739 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
25740 |
26102 |
- |
RS6506 |
Unspecified |
| scaffold1505 |
26334 |
26355 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
28422 |
28575 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1505 |
28967 |
29418 |
- |
RS187 |
Unspecified |
| scaffold1505 |
29939 |
29988 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1505 |
30736 |
30801 |
+ |
(TTATAATT)n |
Simple_repeat |
| scaffold1505 |
32230 |
32489 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold1505 |
33246 |
33333 |
+ |
L1-18_STu |
LINE/L1 |
| scaffold1505 |
33555 |
34020 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold1505 |
34037 |
34257 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold1505 |
34259 |
34581 |
- |
RS228 |
Unspecified |
| scaffold1505 |
34582 |
35136 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold1505 |
35599 |
35714 |
- |
RS10908 |
Unspecified |
| scaffold1505 |
36068 |
36095 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
36166 |
36257 |
+ |
PL289 |
Unspecified |
| scaffold1505 |
36271 |
36301 |
+ |
(GGGCC)n |
Simple_repeat |
| scaffold1505 |
36358 |
36457 |
+ |
RS16009 |
Unspecified |
| scaffold1505 |
36445 |
36498 |
+ |
RS16009 |
Unspecified |
| scaffold1505 |
36675 |
37172 |
+ |
PL463 |
Unspecified |
| scaffold1505 |
37167 |
37590 |
+ |
PL289 |
Unspecified |
| scaffold1505 |
39091 |
39375 |
+ |
RS14585 |
Unspecified |
| scaffold1505 |
40202 |
40522 |
+ |
RS512 |
Unspecified |
| scaffold1505 |
40641 |
40808 |
- |
RS275 |
Unspecified |
| scaffold1505 |
40953 |
41081 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold1505 |
41234 |
41296 |
+ |
RS98 |
Unspecified |
| scaffold1505 |
41362 |
41451 |
+ |
RS549 |
Unspecified |
| scaffold1505 |
41828 |
41959 |
- |
RS542 |
Unspecified |
| scaffold1505 |
42092 |
42253 |
+ |
RS10193 |
Unspecified |
| scaffold1505 |
42477 |
42667 |
- |
RS9061 |
Unspecified |
| scaffold1505 |
42624 |
42763 |
- |
RS997 |
Unspecified |
| scaffold1505 |
42765 |
42822 |
+ |
Copia-69_PT-I |
LTR/Copia |
| scaffold1505 |
42827 |
42956 |
- |
RS542 |
Unspecified |
| scaffold1505 |
43230 |
43369 |
+ |
RS18037 |
Unspecified |
| scaffold1505 |
43858 |
43974 |
+ |
RS13652 |
Unspecified |
| scaffold1505 |
44172 |
44199 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
44505 |
44697 |
+ |
RS12998 |
Unspecified |
| scaffold1505 |
44817 |
45128 |
- |
RS11632 |
Unspecified |
| scaffold1505 |
46023 |
46151 |
- |
RS663 |
Unspecified |
| scaffold1505 |
46325 |
46397 |
+ |
RS4 |
Unspecified |
| scaffold1505 |
46516 |
46685 |
- |
RS3973 |
Unspecified |
| scaffold1505 |
48214 |
48252 |
+ |
(ACTGA)n |
Simple_repeat |
| scaffold1505 |
48922 |
49101 |
- |
PL2 |
Unspecified |
| scaffold1505 |
49593 |
49655 |
+ |
(TTC)n |
Simple_repeat |
| scaffold1505 |
50708 |
51171 |
+ |
RS283 |
Unspecified |
| scaffold1505 |
51409 |
51536 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
51599 |
51648 |
+ |
(ATTTCATT)n |
Simple_repeat |
| scaffold1505 |
51624 |
51653 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
51681 |
51712 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
52119 |
52206 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold1505 |
52842 |
53103 |
- |
RS1 |
Unspecified |
| scaffold1505 |
54022 |
54685 |
- |
RS458 |
Unspecified |
| scaffold1505 |
54652 |
55133 |
+ |
RS1919 |
Unspecified |
| scaffold1505 |
55113 |
55311 |
+ |
PL859 |
Unspecified |
| scaffold1505 |
55761 |
55787 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
55913 |
56157 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
56113 |
56157 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
56343 |
56411 |
+ |
(AATATGT)n |
Simple_repeat |
| scaffold1505 |
56479 |
56539 |
+ |
GA-rich |
Low_complexity |
| scaffold1505 |
56806 |
56998 |
+ |
RS13499 |
Unspecified |
| scaffold1505 |
57241 |
57362 |
- |
RS7524 |
Unspecified |
| scaffold1505 |
57338 |
57437 |
- |
RS12922 |
Unspecified |
| scaffold1505 |
57587 |
57687 |
- |
RS394 |
Unspecified |
| scaffold1505 |
57793 |
57811 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1505 |
57977 |
58444 |
- |
PL469 |
Unspecified |
| scaffold1505 |
58782 |
58833 |
+ |
(TCATATT)n |
Simple_repeat |
| scaffold1505 |
58868 |
58924 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold1505 |
59349 |
59384 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold1505 |
59711 |
59877 |
- |
RS740 |
Unspecified |
| scaffold1505 |
60109 |
60140 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
60270 |
60567 |
- |
RS4294 |
Unspecified |
| scaffold1505 |
60421 |
60738 |
- |
RS5672 |
Unspecified |
| scaffold1505 |
60784 |
60842 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
61893 |
61918 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
62283 |
62567 |
+ |
RS6506 |
Unspecified |
| scaffold1505 |
62973 |
63027 |
- |
PL699 |
Unspecified |
| scaffold1505 |
63105 |
63692 |
- |
PL53 |
Unspecified |
| scaffold1505 |
63768 |
63886 |
+ |
RS2439 |
Unspecified |
| scaffold1505 |
63919 |
63953 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold1505 |
64262 |
64292 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold1505 |
64459 |
64729 |
+ |
RS1943 |
Unspecified |
| scaffold1505 |
65196 |
65283 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold1505 |
66202 |
66240 |
+ |
(TT)n |
Simple_repeat |
| scaffold1505 |
66880 |
66910 |
+ |
(TA)n |
Simple_repeat |
| scaffold1505 |
67382 |
67454 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold1505 |
67583 |
68089 |
- |
PL296 |
Unspecified |
| scaffold1505 |
68329 |
68379 |
+ |
(AGATAT)n |
Simple_repeat |
| scaffold1505 |
69710 |
69730 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
70132 |
70206 |
+ |
RS613 |
Unspecified |
| scaffold1505 |
70442 |
70530 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1505 |
70532 |
70629 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1505 |
72762 |
72911 |
+ |
PL24 |
Unspecified |
| scaffold1505 |
73177 |
73265 |
+ |
(CCA)n |
Simple_repeat |
| scaffold1505 |
73859 |
73929 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold1505 |
74193 |
74241 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold1505 |
74433 |
74850 |
- |
PL3 |
Unspecified |
| scaffold1505 |
74851 |
74966 |
- |
RS285 |
Unspecified |
| scaffold1505 |
75803 |
75945 |
+ |
RS4505 |
Unspecified |
| scaffold1505 |
77047 |
77136 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold1505 |
77138 |
77235 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1505 |
77779 |
77947 |
- |
RS2577 |
Unspecified |
| scaffold1505 |
78609 |
79058 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold1505 |
79087 |
79173 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1505 |
79174 |
79244 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold1505 |
79420 |
79450 |
+ |
(TCA)n |
Simple_repeat |
| scaffold1505 |
79542 |
79591 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1505 |
79592 |
79630 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
79691 |
79713 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1505 |
79744 |
79838 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1505 |
80117 |
80347 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1505 |
80681 |
80713 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
81763 |
81782 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
81816 |
82017 |
- |
PL272 |
Unspecified |
| scaffold1505 |
82143 |
82190 |
+ |
(A)n |
Simple_repeat |
| scaffold1505 |
82180 |
82366 |
+ |
RS13321 |
Unspecified |
| scaffold1505 |
82949 |
82965 |
+ |
(T)n |
Simple_repeat |
| scaffold1505 |
82968 |
83008 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1505 |
84355 |
84498 |
- |
RS73 |
Unspecified |
| scaffold1505 |
84355 |
84441 |
- |
RS1155 |
Unspecified |
| scaffold1505 |
85626 |
85894 |
- |
RS1 |
Unspecified |
| scaffold1505 |
86049 |
86072 |
+ |
(AAAG)n |
Simple_repeat |
| scaffold1505 |
86450 |
86488 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold1505 |
87077 |
87103 |
+ |
(TATG)n |
Simple_repeat |
| scaffold1505 |
87718 |
87761 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold1505 |
88088 |
88121 |
+ |
A-rich |
Low_complexity |
| scaffold1505 |
88168 |
88282 |
- |
RS13929 |
Unspecified |
| scaffold1505 |
88736 |
89210 |
- |
RS260 |
Unspecified |
| scaffold1505 |
89209 |
89473 |
- |
RS356 |
Unspecified |
| scaffold1505 |
89472 |
89603 |
- |
RS260 |
Unspecified |
| scaffold1505 |
89850 |
89993 |
- |
RS260 |
Unspecified |
| scaffold1505 |
91111 |
91229 |
+ |
RS4680 |
Unspecified |