scaffold1731 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1731 |
697 |
861 |
- |
PL643 |
Unspecified |
| scaffold1731 |
861 |
966 |
- |
PL294 |
Unspecified |
| scaffold1731 |
921 |
973 |
+ |
PL294 |
Unspecified |
| scaffold1731 |
1066 |
1180 |
+ |
RS15137 |
Unspecified |
| scaffold1731 |
1677 |
1757 |
- |
PL294 |
Unspecified |
| scaffold1731 |
2078 |
2177 |
- |
RS3379 |
Unspecified |
| scaffold1731 |
2267 |
2413 |
- |
RS1778 |
Unspecified |
| scaffold1731 |
2572 |
2614 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
2781 |
2808 |
+ |
(AT)n |
Simple_repeat |
| scaffold1731 |
3055 |
3228 |
- |
RS2414 |
Unspecified |
| scaffold1731 |
3543 |
3573 |
+ |
(GT)n |
Simple_repeat |
| scaffold1731 |
3801 |
4643 |
+ |
RS123 |
Unspecified |
| scaffold1731 |
4999 |
5106 |
- |
RS9873 |
Unspecified |
| scaffold1731 |
5205 |
5252 |
+ |
(ATGTTG)n |
Simple_repeat |
| scaffold1731 |
6422 |
6550 |
+ |
RS8 |
Unspecified |
| scaffold1731 |
7218 |
7420 |
+ |
RS564 |
Unspecified |
| scaffold1731 |
7587 |
7743 |
+ |
RS7366 |
Unspecified |
| scaffold1731 |
7878 |
8071 |
- |
RS5537 |
Unspecified |
| scaffold1731 |
8029 |
8160 |
- |
RS9663 |
Unspecified |
| scaffold1731 |
8448 |
8591 |
- |
RS7319 |
Unspecified |
| scaffold1731 |
8676 |
8955 |
+ |
RS4428 |
Unspecified |
| scaffold1731 |
9003 |
9312 |
- |
RS6787 |
Unspecified |
| scaffold1731 |
10799 |
10898 |
+ |
RS5189 |
Unspecified |
| scaffold1731 |
10989 |
11114 |
- |
RS5449 |
Unspecified |
| scaffold1731 |
11016 |
11132 |
- |
RS6922 |
Unspecified |
| scaffold1731 |
12160 |
12306 |
- |
RS578 |
Unspecified |
| scaffold1731 |
12443 |
12462 |
+ |
(T)n |
Simple_repeat |
| scaffold1731 |
12789 |
12896 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold1731 |
16504 |
16556 |
- |
PL9 |
Unspecified |
| scaffold1731 |
16531 |
16610 |
- |
RS2112 |
Unspecified |
| scaffold1731 |
16603 |
16651 |
- |
RS3123 |
Unspecified |
| scaffold1731 |
18822 |
18858 |
+ |
(CCTT)n |
Simple_repeat |
| scaffold1731 |
18919 |
18961 |
+ |
G-rich |
Low_complexity |
| scaffold1731 |
19019 |
19403 |
- |
PL9 |
Unspecified |
| scaffold1731 |
19858 |
19888 |
+ |
(TAACAGT)n |
Simple_repeat |
| scaffold1731 |
20414 |
20450 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold1731 |
20537 |
20573 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
21036 |
21427 |
- |
RS29 |
Unspecified |
| scaffold1731 |
22261 |
22278 |
+ |
(T)n |
Simple_repeat |
| scaffold1731 |
22861 |
22897 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
22957 |
22985 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold1731 |
24128 |
24227 |
+ |
RS9340 |
Unspecified |
| scaffold1731 |
25825 |
25889 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
26000 |
26160 |
+ |
RS1048 |
Unspecified |
| scaffold1731 |
27873 |
27964 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
28684 |
28798 |
+ |
RS285 |
Unspecified |
| scaffold1731 |
29118 |
29319 |
- |
PL358 |
Unspecified |
| scaffold1731 |
31331 |
31706 |
+ |
PL270 |
Unspecified |
| scaffold1731 |
31740 |
31833 |
+ |
RS16382 |
Unspecified |
| scaffold1731 |
32397 |
32511 |
+ |
RS6958 |
Unspecified |
| scaffold1731 |
32826 |
32888 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold1731 |
33449 |
33487 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
33597 |
33678 |
+ |
RS534 |
Unspecified |
| scaffold1731 |
33681 |
33883 |
+ |
RS10074 |
Unspecified |
| scaffold1731 |
34299 |
34356 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
34527 |
34588 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
34737 |
34772 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
35086 |
35134 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
35897 |
35918 |
+ |
(T)n |
Simple_repeat |
| scaffold1731 |
36280 |
36607 |
- |
RS126 |
Unspecified |
| scaffold1731 |
36607 |
36851 |
+ |
RS10417 |
Unspecified |
| scaffold1731 |
37303 |
37328 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold1731 |
37738 |
37822 |
- |
RS1298 |
Unspecified |
| scaffold1731 |
37740 |
37815 |
- |
RS10417 |
Unspecified |
| scaffold1731 |
37807 |
38587 |
- |
RS402 |
Unspecified |
| scaffold1731 |
40092 |
40234 |
- |
RS402 |
Unspecified |
| scaffold1731 |
40381 |
40586 |
- |
RS4 |
Unspecified |
| scaffold1731 |
40673 |
40707 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold1731 |
40749 |
40776 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1731 |
41306 |
41332 |
+ |
(AT)n |
Simple_repeat |
| scaffold1731 |
41954 |
41980 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1731 |
42887 |
42920 |
- |
Copia-68_VV-I |
LTR/Copia |
| scaffold1731 |
44574 |
44810 |
+ |
RS347 |
Unspecified |
| scaffold1731 |
44800 |
44912 |
+ |
RS347 |
Unspecified |
| scaffold1731 |
45857 |
46097 |
- |
RS145 |
Unspecified |
| scaffold1731 |
46162 |
46226 |
+ |
(AGTTGTG)n |
Simple_repeat |
| scaffold1731 |
46451 |
46472 |
+ |
(A)n |
Simple_repeat |
| scaffold1731 |
47048 |
47205 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold1731 |
47310 |
47345 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
47378 |
47541 |
+ |
RS210 |
Unspecified |
| scaffold1731 |
47603 |
47677 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold1731 |
47712 |
47804 |
+ |
GA-rich |
Low_complexity |
| scaffold1731 |
47953 |
48031 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
48041 |
48093 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1731 |
48163 |
48222 |
+ |
LINE1-42_ZM |
LINE/L1 |
| scaffold1731 |
50161 |
51162 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold1731 |
53755 |
53818 |
+ |
A-rich |
Low_complexity |
| scaffold1731 |
57773 |
57789 |
+ |
(AGCAACA)n |
Simple_repeat |
| scaffold1731 |
57790 |
57825 |
+ |
(ACAGC)n |
Simple_repeat |
| scaffold1731 |
57826 |
57864 |
+ |
(AGCAACA)n |
Simple_repeat |
| scaffold1731 |
60712 |
60782 |
- |
RS932 |
Unspecified |
| scaffold1731 |
61295 |
61327 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold1731 |
61629 |
61664 |
+ |
(TCT)n |
Simple_repeat |
| scaffold1731 |
61974 |
62462 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1731 |
62612 |
63025 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1731 |
70228 |
70674 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1731 |
70945 |
71007 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold1731 |
72148 |
72222 |
+ |
(TTGTTC)n |
Simple_repeat |
| scaffold1731 |
73221 |
74360 |
- |
RS3063 |
Unspecified |
| scaffold1731 |
73773 |
74588 |
- |
PL921 |
Unspecified |