scaffold17961 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold17961 |
107 |
414 |
- |
RS1554 |
Unspecified |
scaffold17961 |
927 |
1218 |
+ |
RS737 |
Unspecified |
scaffold17961 |
1247 |
1305 |
+ |
(ACATT)n |
Simple_repeat |
scaffold17961 |
1640 |
1847 |
- |
RS3252 |
Unspecified |
scaffold17961 |
2117 |
2150 |
+ |
(TA)n |
Simple_repeat |
scaffold17961 |
2276 |
2298 |
+ |
(CGGC)n |
Simple_repeat |
scaffold17961 |
3167 |
3327 |
- |
RS127 |
Unspecified |
scaffold17961 |
3452 |
3479 |
+ |
(TA)n |
Simple_repeat |
scaffold17961 |
3616 |
3719 |
+ |
(CCACCT)n |
Simple_repeat |
scaffold17961 |
3902 |
3976 |
+ |
(TTTCATT)n |
Simple_repeat |
scaffold17961 |
3992 |
4013 |
+ |
(GGT)n |
Simple_repeat |
scaffold17961 |
4436 |
4508 |
+ |
(TTTA)n |
Simple_repeat |
scaffold17961 |
4612 |
4648 |
+ |
(TTTA)n |
Simple_repeat |
scaffold17961 |
4829 |
4933 |
+ |
RS8468 |
Unspecified |
scaffold17961 |
5304 |
5359 |
+ |
(ACC)n |
Simple_repeat |
scaffold17961 |
5702 |
5778 |
+ |
(TGG)n |
Simple_repeat |
scaffold17961 |
5859 |
5897 |
+ |
(TTGTG)n |
Simple_repeat |
scaffold17961 |
5933 |
5981 |
+ |
(TA)n |
Simple_repeat |
scaffold17961 |
5933 |
6102 |
+ |
(TA)n |
Simple_repeat |
scaffold17961 |
5967 |
6102 |
- |
RS608 |
Unspecified |
scaffold17961 |
6192 |
6235 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
6455 |
6529 |
+ |
(TACA)n |
Simple_repeat |
scaffold17961 |
6838 |
7439 |
+ |
Copia-10_ST-I |
LTR/Copia |
scaffold17961 |
7440 |
7715 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold17961 |
7952 |
8184 |
+ |
ATCopia17I |
LTR/Copia |
scaffold17961 |
8030 |
8871 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
scaffold17961 |
8356 |
9221 |
+ |
Copia-17_ST-I |
LTR/Copia |
scaffold17961 |
9561 |
10141 |
+ |
Copia-17_ST-I |
LTR/Copia |
scaffold17961 |
9651 |
10141 |
+ |
Copia-17_ST-I |
LTR/Copia |
scaffold17961 |
10487 |
10503 |
+ |
(A)n |
Simple_repeat |
scaffold17961 |
10515 |
11549 |
+ |
Copia-23_ST-I |
LTR/Copia |
scaffold17961 |
11639 |
11707 |
+ |
(TACA)n |
Simple_repeat |
scaffold17961 |
13336 |
13598 |
- |
RS365 |
Unspecified |
scaffold17961 |
14123 |
14175 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
14569 |
14832 |
+ |
RS10 |
Unspecified |
scaffold17961 |
15051 |
15075 |
+ |
(A)n |
Simple_repeat |
scaffold17961 |
15093 |
15269 |
+ |
RS5 |
Unspecified |
scaffold17961 |
15378 |
15442 |
+ |
(TCTCAC)n |
Simple_repeat |
scaffold17961 |
15485 |
15536 |
+ |
(CTT)n |
Simple_repeat |
scaffold17961 |
15598 |
15621 |
+ |
(TCG)n |
Simple_repeat |
scaffold17961 |
15886 |
15931 |
+ |
(A)n |
Simple_repeat |
scaffold17961 |
15932 |
15953 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
16418 |
16440 |
+ |
(T)n |
Simple_repeat |
scaffold17961 |
19799 |
19834 |
+ |
(T)n |
Simple_repeat |
scaffold17961 |
20111 |
20325 |
- |
Copia-85_ST-I |
LTR/Copia |
scaffold17961 |
20606 |
20692 |
- |
Copia-88_VV-I |
LTR/Copia |
scaffold17961 |
23624 |
23689 |
- |
Copia-90_Mad-I |
LTR/Copia |
scaffold17961 |
25770 |
25964 |
- |
RS134 |
Unspecified |
scaffold17961 |
26267 |
26351 |
+ |
(ATTTTTA)n |
Simple_repeat |
scaffold17961 |
26428 |
26500 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
26644 |
26680 |
+ |
G-rich |
Low_complexity |
scaffold17961 |
26731 |
26806 |
+ |
G-rich |
Low_complexity |
scaffold17961 |
29408 |
29452 |
+ |
(TTTTG)n |
Simple_repeat |
scaffold17961 |
30477 |
30498 |
+ |
(A)n |
Simple_repeat |
scaffold17961 |
30524 |
30633 |
+ |
RS13007 |
Unspecified |
scaffold17961 |
30787 |
30820 |
+ |
(TT)n |
Simple_repeat |
scaffold17961 |
30839 |
31147 |
- |
RS3630 |
Unspecified |
scaffold17961 |
31277 |
31511 |
+ |
(TTGAAT)n |
Simple_repeat |
scaffold17961 |
31277 |
31333 |
+ |
(TTGAAT)n |
Simple_repeat |
scaffold17961 |
31323 |
31511 |
- |
RS13007 |
Unspecified |
scaffold17961 |
33337 |
33380 |
+ |
RS18371 |
Unspecified |
scaffold17961 |
33354 |
33530 |
+ |
RS17860 |
Unspecified |
scaffold17961 |
34418 |
34456 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold17961 |
34457 |
34477 |
+ |
(TTATT)n |
Simple_repeat |
scaffold17961 |
34619 |
34668 |
+ |
(TCA)n |
Simple_repeat |
scaffold17961 |
36360 |
36430 |
+ |
(AATCAAT)n |
Simple_repeat |
scaffold17961 |
36660 |
36694 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
37180 |
37900 |
+ |
RS3578 |
Unspecified |
scaffold17961 |
37900 |
37960 |
+ |
(T)n |
Simple_repeat |
scaffold17961 |
38396 |
38419 |
+ |
(T)n |
Simple_repeat |
scaffold17961 |
39051 |
39083 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
39577 |
39614 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
40364 |
40434 |
+ |
(AATCAAT)n |
Simple_repeat |
scaffold17961 |
40664 |
40698 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
40954 |
41021 |
+ |
(CTT)n |
Simple_repeat |
scaffold17961 |
41619 |
41674 |
+ |
(TGA)n |
Simple_repeat |
scaffold17961 |
42501 |
42557 |
+ |
(AATAA)n |
Simple_repeat |
scaffold17961 |
43241 |
43274 |
+ |
(T)n |
Simple_repeat |
scaffold17961 |
43756 |
43793 |
+ |
(GT)n |
Simple_repeat |
scaffold17961 |
44490 |
44736 |
- |
RS1120 |
Unspecified |
scaffold17961 |
45419 |
45542 |
- |
RS2419 |
Unspecified |
scaffold17961 |
46256 |
46298 |
+ |
(T)n |
Simple_repeat |
scaffold17961 |
47013 |
47046 |
+ |
(T)n |
Simple_repeat |
scaffold17961 |
47528 |
47567 |
+ |
(GT)n |
Simple_repeat |
scaffold17961 |
49111 |
49147 |
+ |
(ATAACAT)n |
Simple_repeat |
scaffold17961 |
49581 |
49625 |
+ |
(CCGGAT)n |
Simple_repeat |
scaffold17961 |
49875 |
49916 |
+ |
(ATT)n |
Simple_repeat |
scaffold17961 |
50425 |
50461 |
+ |
(A)n |
Simple_repeat |
scaffold17961 |
52823 |
52886 |
+ |
(ACA)n |
Simple_repeat |
scaffold17961 |
53637 |
53687 |
+ |
(CCA)n |
Simple_repeat |
scaffold17961 |
54107 |
54138 |
+ |
A-rich |
Low_complexity |
scaffold17961 |
54182 |
54263 |
+ |
G-rich |
Low_complexity |
scaffold17961 |
54433 |
55109 |
+ |
Mariner-1_GM |
DNA/TcMar-Stowaway |
scaffold17961 |
55194 |
55224 |
+ |
(ACA)n |
Simple_repeat |
scaffold17961 |
55637 |
55664 |
+ |
(TCA)n |
Simple_repeat |
scaffold17961 |
55918 |
56420 |
- |
RS1275 |
Unspecified |
scaffold17961 |
56556 |
56823 |
+ |
PL670 |
Unspecified |
scaffold17961 |
58527 |
58819 |
+ |
RS1200 |
Unspecified |