scaffold17998 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold17998 |
1 |
196 |
- |
RS1120 |
Unspecified |
scaffold17998 |
197 |
294 |
+ |
RS2460 |
Unspecified |
scaffold17998 |
623 |
663 |
+ |
(TTTA)n |
Simple_repeat |
scaffold17998 |
740 |
771 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
1574 |
1694 |
+ |
RS10143 |
Unspecified |
scaffold17998 |
2487 |
2522 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
2879 |
2927 |
+ |
(TATA)n |
Simple_repeat |
scaffold17998 |
3064 |
3123 |
+ |
(GATTG)n |
Simple_repeat |
scaffold17998 |
3456 |
3674 |
- |
RS537 |
Unspecified |
scaffold17998 |
3829 |
3970 |
+ |
RS86 |
Unspecified |
scaffold17998 |
4008 |
4198 |
+ |
RS757 |
Unspecified |
scaffold17998 |
4391 |
4530 |
- |
RS4505 |
Unspecified |
scaffold17998 |
4560 |
4619 |
+ |
(AATT)n |
Simple_repeat |
scaffold17998 |
4618 |
4859 |
+ |
RS145 |
Unspecified |
scaffold17998 |
4893 |
5046 |
- |
RS54 |
Unspecified |
scaffold17998 |
5192 |
5290 |
- |
RS16386 |
Unspecified |
scaffold17998 |
5399 |
5479 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
6125 |
6186 |
+ |
(TTTT)n |
Simple_repeat |
scaffold17998 |
6283 |
6350 |
+ |
(TGAT)n |
Simple_repeat |
scaffold17998 |
6755 |
7691 |
- |
PL124 |
Unspecified |
scaffold17998 |
9710 |
9838 |
- |
RS250 |
Unspecified |
scaffold17998 |
10029 |
10112 |
+ |
(AATTG)n |
Simple_repeat |
scaffold17998 |
10278 |
10301 |
+ |
(TA)n |
Simple_repeat |
scaffold17998 |
10347 |
10530 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold17998 |
13054 |
13168 |
- |
RS4475 |
Unspecified |
scaffold17998 |
13962 |
13991 |
+ |
(ATT)n |
Simple_repeat |
scaffold17998 |
14893 |
14956 |
+ |
(GTTAG)n |
Simple_repeat |
scaffold17998 |
15329 |
15381 |
+ |
(TTA)n |
Simple_repeat |
scaffold17998 |
15382 |
15423 |
+ |
(ATTTTT)n |
Simple_repeat |
scaffold17998 |
15424 |
15445 |
+ |
(TTA)n |
Simple_repeat |
scaffold17998 |
15443 |
15511 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
15647 |
15690 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
15788 |
15811 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
16090 |
16108 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
16889 |
16916 |
+ |
(TATAGT)n |
Simple_repeat |
scaffold17998 |
17011 |
17048 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
17744 |
17770 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
20628 |
20885 |
+ |
RS18 |
Unspecified |
scaffold17998 |
21579 |
21660 |
+ |
RS17326 |
Unspecified |
scaffold17998 |
22132 |
22151 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
22539 |
22578 |
+ |
(AATCATC)n |
Simple_repeat |
scaffold17998 |
22600 |
22634 |
+ |
(AATCAAT)n |
Simple_repeat |
scaffold17998 |
22916 |
22948 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
23700 |
23983 |
- |
RS13542 |
Unspecified |
scaffold17998 |
24489 |
24527 |
+ |
(TATT)n |
Simple_repeat |
scaffold17998 |
25147 |
25373 |
- |
RS7664 |
Unspecified |
scaffold17998 |
25659 |
26029 |
- |
PL637 |
Unspecified |
scaffold17998 |
29797 |
29864 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
30237 |
30268 |
+ |
(TTGGGTT)n |
Simple_repeat |
scaffold17998 |
30458 |
30562 |
- |
RS13064 |
Unspecified |
scaffold17998 |
30458 |
30538 |
- |
RS17 |
Unspecified |
scaffold17998 |
32876 |
32898 |
+ |
(AAC)n |
Simple_repeat |
scaffold17998 |
32899 |
32926 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
33422 |
33446 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
33672 |
33719 |
+ |
(TTTATTT)n |
Simple_repeat |
scaffold17998 |
34784 |
34805 |
+ |
(G)n |
Simple_repeat |
scaffold17998 |
35347 |
35370 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
36553 |
36673 |
+ |
RS10143 |
Unspecified |
scaffold17998 |
37135 |
37178 |
+ |
(TAA)n |
Simple_repeat |
scaffold17998 |
37346 |
37380 |
+ |
(AT)n |
Simple_repeat |
scaffold17998 |
38531 |
38651 |
+ |
RS10143 |
Unspecified |
scaffold17998 |
40201 |
40219 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
42968 |
42988 |
+ |
(TCTA)n |
Simple_repeat |
scaffold17998 |
43413 |
43475 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
44228 |
44287 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
44872 |
44916 |
+ |
(AAT)n |
Simple_repeat |
scaffold17998 |
44917 |
44946 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
45983 |
46455 |
- |
PL402 |
Unspecified |
scaffold17998 |
46507 |
46634 |
- |
RS13542 |
Unspecified |
scaffold17998 |
46529 |
46823 |
+ |
PL688 |
Unspecified |
scaffold17998 |
47012 |
47196 |
+ |
RS6415 |
Unspecified |
scaffold17998 |
47215 |
47366 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
47996 |
48107 |
- |
RS2456 |
Unspecified |
scaffold17998 |
49111 |
49141 |
+ |
(CTGTAC)n |
Simple_repeat |
scaffold17998 |
58030 |
58106 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
58326 |
58414 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
59079 |
59203 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
59490 |
59531 |
+ |
(AGAATAG)n |
Simple_repeat |
scaffold17998 |
59874 |
60051 |
- |
RS178 |
Unspecified |
scaffold17998 |
60349 |
60466 |
+ |
(CAGGT)n |
Simple_repeat |
scaffold17998 |
60482 |
60504 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
60590 |
60713 |
- |
PL619 |
Unspecified |
scaffold17998 |
61727 |
62022 |
+ |
RS888 |
Unspecified |
scaffold17998 |
62165 |
62189 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
62443 |
62485 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold17998 |
62597 |
62815 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
62722 |
62815 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
63092 |
63220 |
+ |
PL637 |
Unspecified |
scaffold17998 |
63393 |
63412 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
64337 |
64361 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
64450 |
64999 |
- |
RS1230 |
Unspecified |
scaffold17998 |
65099 |
65133 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
65295 |
65367 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
65384 |
65410 |
+ |
(TTTGT)n |
Simple_repeat |
scaffold17998 |
72199 |
72319 |
- |
RS10143 |
Unspecified |
scaffold17998 |
73157 |
73255 |
+ |
(TTA)n |
Simple_repeat |
scaffold17998 |
73939 |
74118 |
- |
RS38 |
Unspecified |
scaffold17998 |
74122 |
74175 |
- |
RS15316 |
Unspecified |
scaffold17998 |
77277 |
77472 |
- |
RS18 |
Unspecified |
scaffold17998 |
77610 |
77646 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
82618 |
82654 |
+ |
(TTTATTA)n |
Simple_repeat |
scaffold17998 |
84214 |
84234 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
99059 |
99099 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
100163 |
100192 |
+ |
(ATA)n |
Simple_repeat |
scaffold17998 |
105349 |
105396 |
+ |
(ATAATC)n |
Simple_repeat |
scaffold17998 |
106271 |
106330 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
106392 |
106472 |
- |
Gypsy12-ZM_I-int |
LTR/Gypsy |
scaffold17998 |
109260 |
109289 |
+ |
G-rich |
Low_complexity |
scaffold17998 |
109691 |
109713 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
109994 |
110073 |
+ |
(TCGTGCT)n |
Simple_repeat |
scaffold17998 |
110075 |
110104 |
+ |
(TTTTTTA)n |
Simple_repeat |
scaffold17998 |
110591 |
110650 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
111323 |
111328 |
+ |
(TTTTCG)n |
Simple_repeat |
scaffold17998 |
111329 |
111358 |
+ |
(T)n |
Simple_repeat |
scaffold17998 |
112594 |
112630 |
+ |
(GAGAAT)n |
Simple_repeat |
scaffold17998 |
113496 |
113549 |
+ |
(ACA)n |
Simple_repeat |
scaffold17998 |
113873 |
114196 |
+ |
RS1720 |
Unspecified |
scaffold17998 |
114242 |
114630 |
- |
RS1902 |
Unspecified |
scaffold17998 |
115120 |
115157 |
+ |
GA-rich |
Low_complexity |
scaffold17998 |
115222 |
115905 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
scaffold17998 |
116140 |
116395 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
scaffold17998 |
117964 |
118082 |
+ |
Gypsy-34_VV-I |
LTR/Gypsy |
scaffold17998 |
118574 |
118956 |
+ |
RS8 |
Unspecified |
scaffold17998 |
119871 |
119907 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
120475 |
120583 |
+ |
RS10943 |
Unspecified |
scaffold17998 |
123317 |
123373 |
+ |
(ATG)n |
Simple_repeat |
scaffold17998 |
123637 |
123656 |
+ |
(TTA)n |
Simple_repeat |
scaffold17998 |
125067 |
125235 |
+ |
RS11038 |
Unspecified |
scaffold17998 |
125422 |
126204 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold17998 |
125482 |
125559 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold17998 |
125849 |
125885 |
+ |
ATCopia4I |
LTR/Copia |
scaffold17998 |
126262 |
127533 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold17998 |
127834 |
129449 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold17998 |
129439 |
129608 |
+ |
RS11038 |
Unspecified |
scaffold17998 |
132326 |
132774 |
+ |
PL352 |
Unspecified |
scaffold17998 |
133999 |
134400 |
- |
PL400 |
Unspecified |
scaffold17998 |
134401 |
134693 |
+ |
RS148 |
Unspecified |
scaffold17998 |
134705 |
134730 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
134844 |
134868 |
+ |
(A)n |
Simple_repeat |
scaffold17998 |
136243 |
136418 |
+ |
RS5393 |
Unspecified |
scaffold17998 |
137166 |
137607 |
+ |
(ATATTA)n |
Simple_repeat |
scaffold17998 |
137574 |
137607 |
+ |
(ATATTA)n |
Simple_repeat |
scaffold17998 |
137636 |
137757 |
+ |
RS17416 |
Unspecified |
scaffold17998 |
137804 |
138047 |
- |
RS1705 |
Unspecified |
scaffold17998 |
138167 |
138264 |
+ |
RS8152 |
Unspecified |
scaffold17998 |
138446 |
138496 |
+ |
(AATAA)n |
Simple_repeat |
scaffold17998 |
138599 |
138635 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold17998 |
138796 |
138860 |
+ |
A-rich |
Low_complexity |
scaffold17998 |
139328 |
139848 |
+ |
RS89 |
Unspecified |
scaffold17998 |
140065 |
140137 |
- |
RS2492 |
Unspecified |
scaffold17998 |
140135 |
141419 |
+ |
RS77 |
Unspecified |
scaffold17998 |
142822 |
143167 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
scaffold17998 |
143436 |
144468 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
scaffold17998 |
144495 |
144618 |
- |
RS51 |
Unspecified |
scaffold17998 |
146322 |
148113 |
- |
RS254 |
Unspecified |
scaffold17998 |
149039 |
149109 |
+ |
(TTGTTT)n |
Simple_repeat |
scaffold17998 |
149322 |
149367 |
+ |
(TTGTAT)n |
Simple_repeat |
scaffold17998 |
150077 |
150379 |
- |
PL495 |
Unspecified |
scaffold17998 |
150121 |
151291 |
- |
RS3063 |
Unspecified |
scaffold17998 |
150703 |
151518 |
- |
PL921 |
Unspecified |
scaffold17998 |
151057 |
152496 |
- |
PL554 |
Unspecified |
scaffold17998 |
151557 |
153060 |
+ |
PL888 |
Unspecified |