scaffold18153 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold18153 |
13 |
107 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold18153 |
246 |
268 |
+ |
(TTTACT)n |
Simple_repeat |
| scaffold18153 |
269 |
310 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold18153 |
393 |
518 |
- |
RS13085 |
Unspecified |
| scaffold18153 |
794 |
816 |
+ |
(AAC)n |
Simple_repeat |
| scaffold18153 |
1310 |
1518 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold18153 |
4287 |
4414 |
+ |
RS17222 |
Unspecified |
| scaffold18153 |
4440 |
4806 |
+ |
RS13540 |
Unspecified |
| scaffold18153 |
4839 |
5061 |
+ |
RS13602 |
Unspecified |
| scaffold18153 |
5533 |
5564 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold18153 |
5829 |
5854 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
6049 |
6146 |
+ |
RS1252 |
Unspecified |
| scaffold18153 |
6197 |
6358 |
+ |
RS1168 |
Unspecified |
| scaffold18153 |
6350 |
6469 |
+ |
RS9258 |
Unspecified |
| scaffold18153 |
6372 |
6602 |
+ |
RS1314 |
Unspecified |
| scaffold18153 |
6718 |
7524 |
+ |
RS7192 |
Unspecified |
| scaffold18153 |
11106 |
11162 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold18153 |
11420 |
11479 |
+ |
(ATAGTA)n |
Simple_repeat |
| scaffold18153 |
11702 |
11799 |
- |
ATRAN |
DNA? |
| scaffold18153 |
11944 |
11990 |
+ |
(AACA)n |
Simple_repeat |
| scaffold18153 |
13021 |
13124 |
- |
RS4475 |
Unspecified |
| scaffold18153 |
13405 |
13574 |
+ |
RS1913 |
Unspecified |
| scaffold18153 |
13455 |
13636 |
+ |
(ATTTGT)n |
Simple_repeat |
| scaffold18153 |
13674 |
13851 |
+ |
RS5 |
Unspecified |
| scaffold18153 |
13909 |
14098 |
+ |
RS10029 |
Unspecified |
| scaffold18153 |
14118 |
14156 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold18153 |
14197 |
14231 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
15058 |
15138 |
+ |
(ATT)n |
Simple_repeat |
| scaffold18153 |
15456 |
15509 |
+ |
(ATA)n |
Simple_repeat |
| scaffold18153 |
15598 |
16157 |
- |
PL469 |
Unspecified |
| scaffold18153 |
16165 |
16213 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
16505 |
16545 |
+ |
(TTTCATA)n |
Simple_repeat |
| scaffold18153 |
16580 |
16642 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold18153 |
17061 |
17096 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold18153 |
18409 |
18445 |
+ |
(ATATCAT)n |
Simple_repeat |
| scaffold18153 |
19623 |
19678 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold18153 |
20167 |
20242 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
21549 |
21570 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
21969 |
22178 |
- |
RS22 |
Unspecified |
| scaffold18153 |
22766 |
22831 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold18153 |
23267 |
23302 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold18153 |
25015 |
25192 |
+ |
RS324 |
Unspecified |
| scaffold18153 |
25834 |
25877 |
- |
RS726 |
Unspecified |
| scaffold18153 |
25880 |
26016 |
- |
RS726 |
Unspecified |
| scaffold18153 |
27672 |
27956 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold18153 |
28138 |
28380 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold18153 |
28179 |
28380 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold18153 |
28864 |
29232 |
+ |
RS148 |
Unspecified |
| scaffold18153 |
30981 |
31094 |
- |
RS727 |
Unspecified |
| scaffold18153 |
33342 |
33383 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
36912 |
36981 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold18153 |
36982 |
37184 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold18153 |
38354 |
38415 |
+ |
RS5481 |
Unspecified |
| scaffold18153 |
38429 |
38541 |
+ |
RS5389 |
Unspecified |
| scaffold18153 |
38443 |
38571 |
+ |
RS1458 |
Unspecified |
| scaffold18153 |
38557 |
38719 |
+ |
RS5481 |
Unspecified |
| scaffold18153 |
39283 |
39381 |
+ |
RS18358 |
Unspecified |
| scaffold18153 |
42680 |
42723 |
- |
PL517 |
Unspecified |
| scaffold18153 |
42911 |
42936 |
+ |
(TCCAT)n |
Simple_repeat |
| scaffold18153 |
43020 |
43175 |
+ |
RS1 |
Unspecified |
| scaffold18153 |
43532 |
43635 |
- |
RS17600 |
Unspecified |
| scaffold18153 |
43977 |
44364 |
- |
RS29 |
Unspecified |
| scaffold18153 |
45702 |
45799 |
- |
RS4475 |
Unspecified |
| scaffold18153 |
46112 |
46139 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold18153 |
48845 |
48861 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
50867 |
51050 |
- |
RS148 |
Unspecified |
| scaffold18153 |
51393 |
51445 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold18153 |
51462 |
51501 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold18153 |
52276 |
52312 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
52313 |
52373 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18153 |
55013 |
55372 |
- |
RS8 |
Unspecified |
| scaffold18153 |
55531 |
55555 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
56177 |
56200 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
56815 |
56839 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
58027 |
58047 |
+ |
(TGG)n |
Simple_repeat |
| scaffold18153 |
60595 |
60622 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
62690 |
62717 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
63528 |
63757 |
- |
RS454 |
Unspecified |
| scaffold18153 |
63797 |
63852 |
- |
RS197 |
Unspecified |
| scaffold18153 |
63891 |
63959 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
64512 |
64541 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
65296 |
65539 |
- |
RS454 |
Unspecified |
| scaffold18153 |
66808 |
66850 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
67011 |
67056 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold18153 |
67011 |
67281 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold18153 |
67040 |
67281 |
+ |
RS5074 |
Unspecified |
| scaffold18153 |
67322 |
67396 |
+ |
RS5074 |
Unspecified |
| scaffold18153 |
67887 |
67940 |
+ |
(GGTCC)n |
Simple_repeat |
| scaffold18153 |
68591 |
68633 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
68795 |
68836 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold18153 |
68995 |
69021 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
69375 |
69743 |
+ |
RS6560 |
Unspecified |
| scaffold18153 |
69720 |
69819 |
+ |
RS9025 |
Unspecified |
| scaffold18153 |
70062 |
70250 |
+ |
RS3756 |
Unspecified |
| scaffold18153 |
71409 |
71802 |
+ |
RS512 |
Unspecified |
| scaffold18153 |
72213 |
72231 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
72240 |
72359 |
+ |
RS3741 |
Unspecified |
| scaffold18153 |
72614 |
72758 |
+ |
RS14974 |
Unspecified |
| scaffold18153 |
72957 |
73005 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold18153 |
73163 |
73438 |
- |
RS1 |
Unspecified |
| scaffold18153 |
73341 |
73488 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18153 |
73456 |
73488 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18153 |
73563 |
73626 |
+ |
RS5259 |
Unspecified |
| scaffold18153 |
74507 |
74963 |
+ |
RS17962 |
Unspecified |
| scaffold18153 |
77023 |
77099 |
+ |
(ATT)n |
Simple_repeat |
| scaffold18153 |
77132 |
77158 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold18153 |
77352 |
77375 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
77576 |
77614 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold18153 |
78057 |
78398 |
+ |
RS148 |
Unspecified |
| scaffold18153 |
78441 |
78506 |
+ |
PL561 |
Unspecified |
| scaffold18153 |
78677 |
78837 |
- |
PL616 |
Unspecified |
| scaffold18153 |
81240 |
81458 |
+ |
RS15108 |
Unspecified |
| scaffold18153 |
81430 |
81485 |
+ |
RS9278 |
Unspecified |
| scaffold18153 |
81491 |
81860 |
+ |
RS9278 |
Unspecified |
| scaffold18153 |
81866 |
81958 |
+ |
RS15444 |
Unspecified |
| scaffold18153 |
81920 |
82185 |
- |
RS15891 |
Unspecified |
| scaffold18153 |
81959 |
82251 |
- |
PL9 |
Unspecified |
| scaffold18153 |
82329 |
82366 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
82505 |
82977 |
+ |
RS12181 |
Unspecified |
| scaffold18153 |
83181 |
83416 |
- |
LSU-rRNA_Ath |
rRNA |
| scaffold18153 |
83426 |
83572 |
+ |
RS12184 |
Unspecified |
| scaffold18153 |
83518 |
83621 |
+ |
RS18282 |
Unspecified |
| scaffold18153 |
83644 |
83758 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
83960 |
84028 |
- |
PL567 |
Unspecified |
| scaffold18153 |
83972 |
84429 |
+ |
RS2034 |
Unspecified |
| scaffold18153 |
84434 |
84453 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
84729 |
84848 |
+ |
RS3741 |
Unspecified |
| scaffold18153 |
85103 |
85290 |
+ |
RS14974 |
Unspecified |
| scaffold18153 |
86601 |
86623 |
+ |
(TCA)n |
Simple_repeat |
| scaffold18153 |
87737 |
87851 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold18153 |
87873 |
87934 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold18153 |
88082 |
88174 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold18153 |
88082 |
88226 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold18153 |
88160 |
88226 |
- |
RS14977 |
Unspecified |
| scaffold18153 |
88577 |
88609 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold18153 |
88930 |
88980 |
+ |
(GGT)n |
Simple_repeat |
| scaffold18153 |
89298 |
90173 |
+ |
RS9278 |
Unspecified |
| scaffold18153 |
90182 |
90408 |
+ |
RS15444 |
Unspecified |
| scaffold18153 |
91736 |
92087 |
+ |
RS16932 |
Unspecified |
| scaffold18153 |
92307 |
92323 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
93383 |
93710 |
+ |
RS15970 |
Unspecified |
| scaffold18153 |
94058 |
94185 |
+ |
RS17882 |
Unspecified |
| scaffold18153 |
94336 |
94472 |
+ |
RS16032 |
Unspecified |
| scaffold18153 |
94692 |
94865 |
- |
RS12287 |
Unspecified |
| scaffold18153 |
96780 |
96824 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
97268 |
97657 |
- |
PL576 |
Unspecified |
| scaffold18153 |
97701 |
97727 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
97750 |
98036 |
+ |
RS1010 |
Unspecified |
| scaffold18153 |
97993 |
98047 |
+ |
PL400 |
Unspecified |
| scaffold18153 |
98240 |
98269 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
104121 |
104349 |
+ |
RS18186 |
Unspecified |
| scaffold18153 |
104428 |
104496 |
+ |
(TTTATTG)n |
Simple_repeat |
| scaffold18153 |
105470 |
105529 |
+ |
(ATA)n |
Simple_repeat |
| scaffold18153 |
106260 |
106384 |
+ |
RS16317 |
Unspecified |
| scaffold18153 |
106473 |
106781 |
- |
RS499 |
Unspecified |
| scaffold18153 |
107058 |
107123 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold18153 |
107526 |
107650 |
+ |
RS16317 |
Unspecified |
| scaffold18153 |
109603 |
109784 |
+ |
RS209 |
Unspecified |
| scaffold18153 |
109789 |
109864 |
+ |
RS3558 |
Unspecified |
| scaffold18153 |
109862 |
109955 |
- |
RS1035 |
Unspecified |
| scaffold18153 |
110054 |
110188 |
+ |
RS4639 |
Unspecified |
| scaffold18153 |
110378 |
110621 |
+ |
RS8606 |
Unspecified |
| scaffold18153 |
110632 |
110735 |
+ |
RS8606 |
Unspecified |
| scaffold18153 |
110801 |
110841 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
111013 |
111172 |
+ |
RS11347 |
Unspecified |
| scaffold18153 |
111598 |
111634 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
115273 |
115325 |
+ |
(AATGTT)n |
Simple_repeat |
| scaffold18153 |
116029 |
116264 |
+ |
RS1793 |
Unspecified |
| scaffold18153 |
116353 |
116395 |
+ |
(CATATT)n |
Simple_repeat |
| scaffold18153 |
116509 |
116555 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold18153 |
116674 |
116735 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
116935 |
117108 |
- |
RS38 |
Unspecified |
| scaffold18153 |
117449 |
117513 |
+ |
(AATATGT)n |
Simple_repeat |
| scaffold18153 |
118431 |
118511 |
- |
RS972 |
Unspecified |
| scaffold18153 |
118472 |
118511 |
+ |
RS750 |
Unspecified |
| scaffold18153 |
118559 |
118815 |
+ |
RS454 |
Unspecified |
| scaffold18153 |
118848 |
118911 |
+ |
RS454 |
Unspecified |
| scaffold18153 |
118885 |
119086 |
+ |
RS454 |
Unspecified |
| scaffold18153 |
119083 |
119261 |
+ |
RS4234 |
Unspecified |
| scaffold18153 |
119283 |
119456 |
+ |
RS10850 |
Unspecified |
| scaffold18153 |
120553 |
120619 |
+ |
(CTAACCA)n |
Simple_repeat |
| scaffold18153 |
120587 |
120634 |
+ |
(CAACCGC)n |
Simple_repeat |
| scaffold18153 |
121320 |
121364 |
+ |
RS750 |
Unspecified |
| scaffold18153 |
121621 |
121668 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
122211 |
122603 |
- |
PL223 |
Unspecified |
| scaffold18153 |
122631 |
122641 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
122642 |
122658 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
122659 |
122695 |
+ |
A-rich |
Low_complexity |
| scaffold18153 |
124752 |
125205 |
- |
PL654 |
Unspecified |
| scaffold18153 |
125079 |
125224 |
+ |
PL753 |
Unspecified |
| scaffold18153 |
125231 |
125269 |
+ |
(A)n |
Simple_repeat |
| scaffold18153 |
126658 |
126795 |
+ |
RS17955 |
Unspecified |
| scaffold18153 |
127709 |
127810 |
+ |
RS15723 |
Unspecified |
| scaffold18153 |
128052 |
128078 |
+ |
(T)n |
Simple_repeat |
| scaffold18153 |
129025 |
129131 |
+ |
RS15962 |
Unspecified |
| scaffold18153 |
129649 |
129781 |
- |
RS13542 |
Unspecified |
| scaffold18153 |
129822 |
129911 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold18153 |
130173 |
130246 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold18153 |
130277 |
130347 |
- |
PL276 |
Unspecified |
| scaffold18153 |
130676 |
130722 |
+ |
EnSpm12_SB |
DNA/CMC-EnSpm |
| scaffold18153 |
135956 |
136162 |
+ |
RS9358 |
Unspecified |
| scaffold18153 |
139589 |
139955 |
- |
RS8 |
Unspecified |
| scaffold18153 |
139919 |
139967 |
- |
RS18407 |
Unspecified |