scaffold18240 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold18240 |
603 |
633 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
1440 |
1477 |
- |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold18240 |
1615 |
1650 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
1647 |
2078 |
- |
RS5198 |
Unspecified |
| scaffold18240 |
2185 |
2408 |
+ |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold18240 |
2526 |
2781 |
+ |
RS14530 |
Unspecified |
| scaffold18240 |
2795 |
2920 |
+ |
RS4787 |
Unspecified |
| scaffold18240 |
4015 |
4155 |
+ |
(ACA)n |
Simple_repeat |
| scaffold18240 |
4896 |
4943 |
+ |
(ATCAAC)n |
Simple_repeat |
| scaffold18240 |
5069 |
5201 |
+ |
RS10576 |
Unspecified |
| scaffold18240 |
5454 |
5513 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold18240 |
5549 |
5592 |
+ |
(AATTGTT)n |
Simple_repeat |
| scaffold18240 |
6646 |
6740 |
+ |
RS15240 |
Unspecified |
| scaffold18240 |
6852 |
6885 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
6865 |
6960 |
+ |
Athila6B_I-int |
LTR/Gypsy |
| scaffold18240 |
7119 |
7140 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
7148 |
7182 |
+ |
(AT)n |
Simple_repeat |
| scaffold18240 |
7275 |
7353 |
+ |
(ATA)n |
Simple_repeat |
| scaffold18240 |
7721 |
7990 |
- |
RS1 |
Unspecified |
| scaffold18240 |
8319 |
8362 |
+ |
(TTCTTAC)n |
Simple_repeat |
| scaffold18240 |
8466 |
8572 |
- |
RS285 |
Unspecified |
| scaffold18240 |
9432 |
9553 |
+ |
RS17412 |
Unspecified |
| scaffold18240 |
10341 |
10507 |
+ |
(ACAATA)n |
Simple_repeat |
| scaffold18240 |
10516 |
10562 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18240 |
12387 |
12413 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold18240 |
13658 |
13688 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold18240 |
13689 |
13749 |
+ |
(ATA)n |
Simple_repeat |
| scaffold18240 |
13750 |
13793 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold18240 |
13943 |
14037 |
+ |
DNA3-1_STu |
DNA/PIF-Harbinger |
| scaffold18240 |
14373 |
14401 |
+ |
(ATGTTTA)n |
Simple_repeat |
| scaffold18240 |
14718 |
14964 |
+ |
RS7934 |
Unspecified |
| scaffold18240 |
15225 |
15292 |
+ |
(AATA)n |
Simple_repeat |
| scaffold18240 |
15870 |
15897 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
16952 |
16985 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
17030 |
17210 |
- |
RS79 |
Unspecified |
| scaffold18240 |
17986 |
18039 |
+ |
(TATT)n |
Simple_repeat |
| scaffold18240 |
18038 |
18131 |
- |
RS16382 |
Unspecified |
| scaffold18240 |
18145 |
18176 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
19811 |
19848 |
+ |
(GTA)n |
Simple_repeat |
| scaffold18240 |
24659 |
25011 |
- |
RS4379 |
Unspecified |
| scaffold18240 |
24935 |
25088 |
- |
RS9645 |
Unspecified |
| scaffold18240 |
25086 |
25359 |
- |
RS8280 |
Unspecified |
| scaffold18240 |
25413 |
25545 |
- |
RS4379 |
Unspecified |
| scaffold18240 |
25469 |
25622 |
- |
RS9645 |
Unspecified |
| scaffold18240 |
25620 |
25896 |
- |
RS8280 |
Unspecified |
| scaffold18240 |
25911 |
25945 |
+ |
(TATAGA)n |
Simple_repeat |
| scaffold18240 |
26187 |
26228 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold18240 |
27382 |
27403 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
28504 |
28520 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
29028 |
29059 |
+ |
(TTGAGA)n |
Simple_repeat |
| scaffold18240 |
29928 |
30205 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold18240 |
30239 |
30271 |
+ |
(AT)n |
Simple_repeat |
| scaffold18240 |
31584 |
31691 |
- |
RS172 |
Unspecified |
| scaffold18240 |
31817 |
31885 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
32021 |
32217 |
+ |
RS454 |
Unspecified |
| scaffold18240 |
32235 |
32272 |
+ |
(ATACG)n |
Simple_repeat |
| scaffold18240 |
32403 |
32454 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
32579 |
32595 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
32835 |
32916 |
+ |
(TTTGTAT)n |
Simple_repeat |
| scaffold18240 |
32994 |
33150 |
+ |
RS295 |
Unspecified |
| scaffold18240 |
33222 |
33274 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
34417 |
34450 |
+ |
(AATATTG)n |
Simple_repeat |
| scaffold18240 |
34917 |
34940 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold18240 |
35146 |
35189 |
+ |
(GATGTGG)n |
Simple_repeat |
| scaffold18240 |
35753 |
35861 |
+ |
RS454 |
Unspecified |
| scaffold18240 |
37368 |
37413 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold18240 |
40807 |
40836 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
41398 |
41433 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
41466 |
41484 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
41585 |
41771 |
+ |
RS2827 |
Unspecified |
| scaffold18240 |
42419 |
42881 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
42851 |
42881 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
43920 |
44065 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold18240 |
44795 |
44848 |
+ |
(TAT)n |
Simple_repeat |
| scaffold18240 |
45099 |
45138 |
+ |
(TTA)n |
Simple_repeat |
| scaffold18240 |
47647 |
47710 |
+ |
(CACAAC)n |
Simple_repeat |
| scaffold18240 |
48776 |
48843 |
+ |
PL81 |
Unspecified |
| scaffold18240 |
48903 |
49390 |
+ |
RS334 |
Unspecified |
| scaffold18240 |
49389 |
49651 |
+ |
RS1 |
Unspecified |
| scaffold18240 |
49676 |
49703 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
52723 |
52752 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold18240 |
53198 |
53231 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
53835 |
54042 |
- |
RS7740 |
Unspecified |
| scaffold18240 |
54122 |
54337 |
- |
RS13353 |
Unspecified |
| scaffold18240 |
58000 |
58048 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
58225 |
58346 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold18240 |
58948 |
59251 |
+ |
RS146 |
Unspecified |
| scaffold18240 |
59348 |
59386 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
59710 |
59931 |
- |
PL6 |
Unspecified |
| scaffold18240 |
60964 |
61154 |
+ |
RS12838 |
Unspecified |
| scaffold18240 |
61277 |
61314 |
+ |
G-rich |
Low_complexity |
| scaffold18240 |
61617 |
61635 |
+ |
(CAACCA)n |
Simple_repeat |
| scaffold18240 |
61636 |
61700 |
+ |
(CACCAC)n |
Simple_repeat |
| scaffold18240 |
62231 |
62383 |
+ |
RS15801 |
Unspecified |
| scaffold18240 |
62735 |
62856 |
+ |
RS17446 |
Unspecified |
| scaffold18240 |
64226 |
64279 |
+ |
GA-rich |
Low_complexity |
| scaffold18240 |
64280 |
64304 |
+ |
(GAG)n |
Simple_repeat |
| scaffold18240 |
64424 |
64465 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold18240 |
64725 |
64742 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
65442 |
65585 |
+ |
RS11375 |
Unspecified |
| scaffold18240 |
66780 |
66811 |
- |
RS154 |
Unspecified |
| scaffold18240 |
67471 |
68296 |
- |
RS7926 |
Unspecified |
| scaffold18240 |
68422 |
68670 |
+ |
RS14051 |
Unspecified |
| scaffold18240 |
68675 |
68914 |
- |
RS8693 |
Unspecified |
| scaffold18240 |
68794 |
68930 |
+ |
RS17529 |
Unspecified |
| scaffold18240 |
69555 |
69693 |
+ |
RS16460 |
Unspecified |
| scaffold18240 |
69728 |
69864 |
+ |
RS16694 |
Unspecified |
| scaffold18240 |
73132 |
73272 |
+ |
RS16700 |
Unspecified |
| scaffold18240 |
74152 |
74187 |
+ |
(GTCAA)n |
Simple_repeat |
| scaffold18240 |
74785 |
74842 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
74912 |
74929 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
75120 |
75141 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold18240 |
75293 |
75317 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold18240 |
75598 |
75710 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
75887 |
75923 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold18240 |
75962 |
76125 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold18240 |
76284 |
76437 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold18240 |
76641 |
76691 |
+ |
(ATTTG)n |
Simple_repeat |
| scaffold18240 |
77040 |
77079 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold18240 |
77348 |
77750 |
+ |
RS18383 |
Unspecified |
| scaffold18240 |
78482 |
78599 |
+ |
RS17277 |
Unspecified |
| scaffold18240 |
79950 |
79977 |
+ |
(CAG)n |
Simple_repeat |
| scaffold18240 |
80522 |
80553 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
81742 |
81786 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold18240 |
83372 |
83430 |
+ |
(AGTGAAG)n |
Simple_repeat |
| scaffold18240 |
83625 |
83674 |
+ |
(TTGAG)n |
Simple_repeat |
| scaffold18240 |
84002 |
84115 |
+ |
RS3110 |
Unspecified |
| scaffold18240 |
84710 |
85429 |
+ |
RS1009 |
Unspecified |
| scaffold18240 |
85831 |
85878 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
86632 |
86845 |
- |
RTE-1_TD |
LINE/RTE-BovB |
| scaffold18240 |
92091 |
92127 |
+ |
(ATC)n |
Simple_repeat |
| scaffold18240 |
92185 |
92298 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
92760 |
92917 |
- |
Gypsy-41_STu-I |
LTR/Gypsy |
| scaffold18240 |
92969 |
93142 |
- |
Gypsy-41_STu-I |
LTR/Gypsy |
| scaffold18240 |
95488 |
95536 |
+ |
(GGT)n |
Simple_repeat |
| scaffold18240 |
98692 |
98736 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
98843 |
98879 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
98985 |
99020 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold18240 |
102389 |
102414 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
103065 |
103185 |
+ |
RS16103 |
Unspecified |
| scaffold18240 |
103255 |
103299 |
+ |
(TAT)n |
Simple_repeat |
| scaffold18240 |
103401 |
103442 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18240 |
103863 |
103913 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
104188 |
104218 |
+ |
(T)n |
Simple_repeat |
| scaffold18240 |
104395 |
104413 |
+ |
(A)n |
Simple_repeat |
| scaffold18240 |
105037 |
105296 |
- |
PL444 |
Unspecified |
| scaffold18240 |
105289 |
105563 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
105523 |
105563 |
+ |
A-rich |
Low_complexity |
| scaffold18240 |
105946 |
106076 |
+ |
RS7824 |
Unspecified |
| scaffold18240 |
106105 |
106149 |
- |
RS84 |
Unspecified |