scaffold20419 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold20419 |
8 |
225 |
+ |
Copia-22_BD-I |
LTR/Copia |
| scaffold20419 |
710 |
775 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold20419 |
4028 |
4067 |
+ |
(ATACA)n |
Simple_repeat |
| scaffold20419 |
4549 |
5011 |
- |
PL2 |
Unspecified |
| scaffold20419 |
5004 |
5101 |
+ |
(TCTACG)n |
Simple_repeat |
| scaffold20419 |
5067 |
5101 |
+ |
(TCTACG)n |
Simple_repeat |
| scaffold20419 |
5156 |
5177 |
+ |
(A)n |
Simple_repeat |
| scaffold20419 |
5197 |
6281 |
+ |
RS13510 |
Unspecified |
| scaffold20419 |
6542 |
6804 |
+ |
RS365 |
Unspecified |
| scaffold20419 |
6964 |
7209 |
- |
RS193 |
Unspecified |
| scaffold20419 |
8534 |
8763 |
+ |
RS1349 |
Unspecified |
| scaffold20419 |
9098 |
9125 |
+ |
(T)n |
Simple_repeat |
| scaffold20419 |
9180 |
9320 |
+ |
RS2386 |
Unspecified |
| scaffold20419 |
10070 |
10103 |
+ |
(ATC)n |
Simple_repeat |
| scaffold20419 |
10139 |
10191 |
+ |
A-rich |
Low_complexity |
| scaffold20419 |
10231 |
10265 |
+ |
(ATA)n |
Simple_repeat |
| scaffold20419 |
11179 |
11231 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold20419 |
11252 |
11322 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold20419 |
11327 |
11446 |
- |
RS4809 |
Unspecified |
| scaffold20419 |
13941 |
13957 |
+ |
(AT)n |
Simple_repeat |
| scaffold20419 |
15183 |
15212 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold20419 |
15600 |
15637 |
+ |
(TTA)n |
Simple_repeat |
| scaffold20419 |
16238 |
16264 |
+ |
A-rich |
Low_complexity |
| scaffold20419 |
16323 |
16371 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold20419 |
16431 |
16466 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold20419 |
16704 |
16741 |
+ |
(TTC)n |
Simple_repeat |
| scaffold20419 |
16812 |
16844 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold20419 |
17155 |
17417 |
+ |
RS47 |
Unspecified |
| scaffold20419 |
17668 |
17707 |
- |
RS18111 |
Unspecified |
| scaffold20419 |
17709 |
17810 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold20419 |
17883 |
17927 |
+ |
A-rich |
Low_complexity |
| scaffold20419 |
18154 |
18313 |
- |
RS1303 |
Unspecified |
| scaffold20419 |
18476 |
18503 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold20419 |
18521 |
18601 |
- |
RS326 |
Unspecified |
| scaffold20419 |
18583 |
18868 |
- |
RS918 |
Unspecified |
| scaffold20419 |
18910 |
18940 |
+ |
(CGAGC)n |
Simple_repeat |
| scaffold20419 |
19172 |
19276 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold20419 |
19291 |
19317 |
+ |
(GATC)n |
Simple_repeat |
| scaffold20419 |
19419 |
19439 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold20419 |
19518 |
19699 |
- |
RS326 |
Unspecified |
| scaffold20419 |
19811 |
19855 |
+ |
(ATAAGT)n |
Simple_repeat |
| scaffold20419 |
19978 |
20014 |
+ |
(TCTCACA)n |
Simple_repeat |
| scaffold20419 |
20004 |
20028 |
+ |
(CACGT)n |
Simple_repeat |
| scaffold20419 |
21353 |
21414 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold20419 |
21724 |
21753 |
+ |
(A)n |
Simple_repeat |
| scaffold20419 |
22138 |
22215 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold20419 |
22709 |
22766 |
+ |
A-rich |
Low_complexity |
| scaffold20419 |
22930 |
23000 |
- |
RS454 |
Unspecified |
| scaffold20419 |
23009 |
23218 |
+ |
RS9928 |
Unspecified |
| scaffold20419 |
23240 |
23426 |
+ |
RS509 |
Unspecified |
| scaffold20419 |
24810 |
25589 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold20419 |
25657 |
25702 |
+ |
A-rich |
Low_complexity |
| scaffold20419 |
25983 |
26279 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold20419 |
26684 |
26708 |
+ |
(T)n |
Simple_repeat |
| scaffold20419 |
26967 |
27161 |
- |
PL836 |
Unspecified |
| scaffold20419 |
27394 |
27470 |
+ |
RS1172 |
Unspecified |
| scaffold20419 |
27806 |
28067 |
- |
RS109 |
Unspecified |
| scaffold20419 |
28164 |
28197 |
+ |
(T)n |
Simple_repeat |
| scaffold20419 |
28262 |
28297 |
+ |
(TTCCTAA)n |
Simple_repeat |
| scaffold20419 |
28392 |
28422 |
+ |
(TCAAAA)n |
Simple_repeat |
| scaffold20419 |
28435 |
28466 |
+ |
(A)n |
Simple_repeat |
| scaffold20419 |
29084 |
29845 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold20419 |
29087 |
29622 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold20419 |
29912 |
30276 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold20419 |
30437 |
30508 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold20419 |
30526 |
30909 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold20419 |
31022 |
31173 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold20419 |
32377 |
32413 |
+ |
(T)n |
Simple_repeat |
| scaffold20419 |
32969 |
33033 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold20419 |
33562 |
33584 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold20419 |
33672 |
34438 |
- |
RS821 |
Unspecified |
| scaffold20419 |
34980 |
35140 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold20419 |
34980 |
35575 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold20419 |
35070 |
35575 |
- |
PL866 |
Unspecified |
| scaffold20419 |
35586 |
35638 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold20419 |
36660 |
36702 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold20419 |
37124 |
37171 |
+ |
(GTATT)n |
Simple_repeat |
| scaffold20419 |
37632 |
37689 |
+ |
(AATAATA)n |
Simple_repeat |
| scaffold20419 |
38209 |
38334 |
- |
RS1901 |
Unspecified |
| scaffold20419 |
38342 |
38436 |
- |
RS1901 |
Unspecified |
| scaffold20419 |
38357 |
38658 |
+ |
RS859 |
Unspecified |
| scaffold20419 |
39164 |
39240 |
+ |
A-rich |
Low_complexity |
| scaffold20419 |
39583 |
41134 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold20419 |
41600 |
42883 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold20419 |
43123 |
43232 |
- |
Copia-93_VV-I |
LTR/Copia |