scaffold2313 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2313 |
1 |
531 |
+ |
RS289 |
Unspecified |
| scaffold2313 |
314 |
800 |
- |
PL925 |
Unspecified |
| scaffold2313 |
441 |
1203 |
+ |
PL229 |
Unspecified |
| scaffold2313 |
675 |
1217 |
- |
PL628 |
Unspecified |
| scaffold2313 |
1230 |
1304 |
+ |
(TATT)n |
Simple_repeat |
| scaffold2313 |
1352 |
1832 |
+ |
PL350 |
Unspecified |
| scaffold2313 |
2136 |
2171 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
2675 |
2736 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold2313 |
3144 |
3189 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
4047 |
4153 |
+ |
RS6480 |
Unspecified |
| scaffold2313 |
4308 |
4379 |
+ |
(TAAGTAA)n |
Simple_repeat |
| scaffold2313 |
4790 |
4914 |
+ |
RS5553 |
Unspecified |
| scaffold2313 |
4936 |
5375 |
+ |
RS6983 |
Unspecified |
| scaffold2313 |
5602 |
5624 |
+ |
(A)n |
Simple_repeat |
| scaffold2313 |
5688 |
5750 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold2313 |
9541 |
9567 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold2313 |
10535 |
10561 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold2313 |
11169 |
11196 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
11652 |
11833 |
+ |
RS79 |
Unspecified |
| scaffold2313 |
12085 |
12140 |
+ |
(CT)n |
Simple_repeat |
| scaffold2313 |
12220 |
13137 |
- |
RS140 |
Unspecified |
| scaffold2313 |
13313 |
13386 |
+ |
(GAAATAC)n |
Simple_repeat |
| scaffold2313 |
13387 |
13621 |
- |
RS1955 |
Unspecified |
| scaffold2313 |
13425 |
13621 |
- |
RS1955 |
Unspecified |
| scaffold2313 |
13854 |
13922 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
14215 |
14283 |
+ |
(CAA)n |
Simple_repeat |
| scaffold2313 |
15271 |
15308 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
15315 |
15356 |
+ |
GA-rich |
Low_complexity |
| scaffold2313 |
15645 |
15691 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold2313 |
16049 |
16094 |
+ |
(AAC)n |
Simple_repeat |
| scaffold2313 |
16304 |
16342 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
16573 |
16646 |
- |
RS7374 |
Unspecified |
| scaffold2313 |
16582 |
16646 |
- |
RS356 |
Unspecified |
| scaffold2313 |
16647 |
18027 |
- |
RS186 |
Unspecified |
| scaffold2313 |
18028 |
18152 |
+ |
RS11189 |
Unspecified |
| scaffold2313 |
18696 |
18733 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold2313 |
19336 |
19356 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
19407 |
19434 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
19435 |
19444 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold2313 |
19445 |
19453 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold2313 |
19593 |
19859 |
- |
RS3651 |
Unspecified |
| scaffold2313 |
19884 |
20098 |
- |
RS68 |
Unspecified |
| scaffold2313 |
20915 |
20976 |
+ |
GA-rich |
Low_complexity |
| scaffold2313 |
21107 |
21237 |
+ |
RS18168 |
Unspecified |
| scaffold2313 |
22239 |
22270 |
+ |
(AACTT)n |
Simple_repeat |
| scaffold2313 |
24497 |
24974 |
- |
RS7210 |
Unspecified |
| scaffold2313 |
25192 |
25219 |
+ |
(AC)n |
Simple_repeat |
| scaffold2313 |
25745 |
25898 |
+ |
RS12942 |
Unspecified |
| scaffold2313 |
27960 |
27997 |
+ |
(CAT)n |
Simple_repeat |
| scaffold2313 |
28101 |
28146 |
+ |
(AC)n |
Simple_repeat |
| scaffold2313 |
28317 |
28572 |
- |
RS1 |
Unspecified |
| scaffold2313 |
28662 |
28712 |
- |
RS512 |
Unspecified |
| scaffold2313 |
28747 |
28878 |
+ |
PL516 |
Unspecified |
| scaffold2313 |
29562 |
29588 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
30498 |
30570 |
+ |
TOTO1_LP_I-int |
LTR/Copia |
| scaffold2313 |
31683 |
31943 |
- |
RS512 |
Unspecified |
| scaffold2313 |
32020 |
32496 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold2313 |
32842 |
32864 |
+ |
(A)n |
Simple_repeat |
| scaffold2313 |
32865 |
32977 |
- |
Copia-101_Mad-I |
LTR/Copia |
| scaffold2313 |
33002 |
33350 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold2313 |
33400 |
34953 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold2313 |
35699 |
35737 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
35843 |
35869 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
36547 |
36585 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold2313 |
37228 |
37266 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
37928 |
37966 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold2313 |
38606 |
38644 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
39304 |
39342 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold2313 |
39981 |
40019 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
40123 |
40149 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
40835 |
40873 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
40977 |
41003 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
41689 |
41727 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
42179 |
42216 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold2313 |
43069 |
43107 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
43557 |
43594 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold2313 |
43769 |
43807 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold2313 |
44447 |
44485 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
44926 |
44963 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold2313 |
45138 |
45176 |
+ |
(TAAC)n |
Simple_repeat |
| scaffold2313 |
45814 |
45852 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
46424 |
46566 |
+ |
GYCUME1_I-int |
LTR/Gypsy |
| scaffold2313 |
46513 |
46551 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold2313 |
47191 |
47229 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
47333 |
47356 |
+ |
(T)n |
Simple_repeat |
| scaffold2313 |
47675 |
47709 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold2313 |
47958 |
47995 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold2313 |
48837 |
48875 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
49326 |
49363 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold2313 |
49538 |
49576 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold2313 |
50107 |
50672 |
+ |
RS674 |
Unspecified |
| scaffold2313 |
50668 |
50850 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold2313 |
50916 |
50965 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
50974 |
51004 |
+ |
(GAT)n |
Simple_repeat |
| scaffold2313 |
51042 |
51244 |
+ |
RS10494 |
Unspecified |
| scaffold2313 |
51088 |
51302 |
+ |
RS4214 |
Unspecified |
| scaffold2313 |
51371 |
51429 |
+ |
(TGA)n |
Simple_repeat |
| scaffold2313 |
51584 |
51701 |
- |
RS657 |
Unspecified |
| scaffold2313 |
51805 |
51843 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
52303 |
52370 |
+ |
(TTATAAT)n |
Simple_repeat |
| scaffold2313 |
52523 |
52554 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold2313 |
53184 |
53222 |
+ |
A-rich |
Low_complexity |
| scaffold2313 |
53891 |
53929 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold2313 |
54746 |
54794 |
+ |
(ATTAT)n |
Simple_repeat |