scaffold24265 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold24265 |
83 |
499 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold24265 |
188 |
309 |
- |
Copia-30-I_VV |
LTR/Copia |
| scaffold24265 |
720 |
902 |
+ |
RS5570 |
Unspecified |
| scaffold24265 |
2414 |
2465 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold24265 |
4028 |
4058 |
+ |
TNR10 |
DNA |
| scaffold24265 |
4542 |
4626 |
+ |
LTR-2_MX-LTR |
LTR |
| scaffold24265 |
5141 |
5516 |
- |
RS1707 |
Unspecified |
| scaffold24265 |
5143 |
5591 |
+ |
RS1545 |
Unspecified |
| scaffold24265 |
5206 |
6195 |
+ |
RS2725 |
Unspecified |
| scaffold24265 |
6779 |
6960 |
- |
MUTRIM1 |
DNA/MULE-MuDR |
| scaffold24265 |
7421 |
7751 |
+ |
RS1936 |
Unspecified |
| scaffold24265 |
7693 |
7948 |
+ |
RS876 |
Unspecified |
| scaffold24265 |
8012 |
8056 |
+ |
A-rich |
Low_complexity |
| scaffold24265 |
8228 |
8255 |
+ |
(AT)n |
Simple_repeat |
| scaffold24265 |
8256 |
8397 |
- |
TTO1_NT_LTR |
LTR/Copia |
| scaffold24265 |
8836 |
9061 |
- |
RS10379 |
Unspecified |
| scaffold24265 |
9873 |
9913 |
+ |
A-rich |
Low_complexity |
| scaffold24265 |
11507 |
11809 |
- |
PL326 |
Unspecified |
| scaffold24265 |
11825 |
11858 |
+ |
RS4 |
Unspecified |
| scaffold24265 |
12111 |
12404 |
- |
RS5143 |
Unspecified |
| scaffold24265 |
13449 |
13521 |
+ |
(AAT)n |
Simple_repeat |
| scaffold24265 |
13760 |
13801 |
+ |
A-rich |
Low_complexity |
| scaffold24265 |
14112 |
14134 |
+ |
(A)n |
Simple_repeat |
| scaffold24265 |
14140 |
14176 |
+ |
(TGGACC)n |
Simple_repeat |
| scaffold24265 |
14253 |
14304 |
+ |
(GGATCC)n |
Simple_repeat |
| scaffold24265 |
16487 |
16516 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold24265 |
16599 |
16751 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold24265 |
16911 |
17073 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold24265 |
17227 |
17279 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold24265 |
18819 |
18870 |
+ |
(CCGCC)n |
Simple_repeat |
| scaffold24265 |
18960 |
18971 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold24265 |
18972 |
18995 |
+ |
(T)n |
Simple_repeat |
| scaffold24265 |
18996 |
19003 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold24265 |
19314 |
19364 |
+ |
(GGT)n |
Simple_repeat |
| scaffold24265 |
19445 |
19500 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold24265 |
20597 |
20615 |
+ |
(A)n |
Simple_repeat |
| scaffold24265 |
21548 |
21575 |
+ |
(T)n |
Simple_repeat |
| scaffold24265 |
21739 |
21773 |
+ |
(ATT)n |
Simple_repeat |
| scaffold24265 |
23180 |
23532 |
+ |
RS992 |
Unspecified |
| scaffold24265 |
23741 |
23994 |
+ |
RS5602 |
Unspecified |
| scaffold24265 |
23862 |
24016 |
- |
RS992 |
Unspecified |
| scaffold24265 |
24122 |
24239 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold24265 |
24993 |
25053 |
+ |
A-rich |
Low_complexity |
| scaffold24265 |
25124 |
25588 |
- |
PL567 |
Unspecified |
| scaffold24265 |
27601 |
27645 |
+ |
(TTTGTAG)n |
Simple_repeat |
| scaffold24265 |
27724 |
27745 |
+ |
(GTC)n |
Simple_repeat |
| scaffold24265 |
28479 |
28601 |
+ |
RS17600 |
Unspecified |
| scaffold24265 |
28870 |
28970 |
+ |
RS237 |
Unspecified |
| scaffold24265 |
29022 |
29059 |
+ |
(ATATTAA)n |
Simple_repeat |
| scaffold24265 |
29336 |
29383 |
+ |
RS17600 |
Unspecified |
| scaffold24265 |
31098 |
31173 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold24265 |
31389 |
31463 |
+ |
A-rich |
Low_complexity |
| scaffold24265 |
32058 |
32094 |
+ |
(T)n |
Simple_repeat |
| scaffold24265 |
32092 |
32481 |
+ |
RS2034 |
Unspecified |
| scaffold24265 |
32687 |
32711 |
+ |
(A)n |
Simple_repeat |
| scaffold24265 |
33044 |
33078 |
+ |
(T)n |
Simple_repeat |
| scaffold24265 |
33566 |
33631 |
+ |
A-rich |
Low_complexity |
| scaffold24265 |
34116 |
34132 |
+ |
(A)n |
Simple_repeat |
| scaffold24265 |
34679 |
34707 |
+ |
(A)n |
Simple_repeat |
| scaffold24265 |
35047 |
35064 |
+ |
(T)n |
Simple_repeat |
| scaffold24265 |
35134 |
35170 |
+ |
(ATACG)n |
Simple_repeat |
| scaffold24265 |
35171 |
35186 |
+ |
(TATACGG)n |
Simple_repeat |
| scaffold24265 |
35551 |
35810 |
- |
RS237 |
Unspecified |
| scaffold24265 |
35766 |
35819 |
- |
RS17600 |
Unspecified |
| scaffold24265 |
35807 |
36044 |
- |
RS50 |
Unspecified |
| scaffold24265 |
36064 |
36279 |
- |
RS6756 |
Unspecified |
| scaffold24265 |
37113 |
37660 |
+ |
Mariner-1_GM |
DNA/TcMar-Stowaway |
| scaffold24265 |
39101 |
39141 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold24265 |
39458 |
39711 |
- |
RS897 |
Unspecified |
| scaffold24265 |
40116 |
40284 |
- |
RS8549 |
Unspecified |
| scaffold24265 |
40414 |
40453 |
+ |
A-rich |
Low_complexity |
| scaffold24265 |
40505 |
40706 |
- |
RS18141 |
Unspecified |
| scaffold24265 |
40656 |
41120 |
- |
RS5662 |
Unspecified |
| scaffold24265 |
40899 |
41192 |
- |
RS2916 |
Unspecified |
| scaffold24265 |
41538 |
41748 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold24265 |
41560 |
41748 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold24265 |
41795 |
41828 |
+ |
(ATA)n |
Simple_repeat |
| scaffold24265 |
44497 |
44611 |
+ |
EnSpm-3_VV |
DNA/CMC-EnSpm |
| scaffold24265 |
46872 |
46932 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold24265 |
51703 |
51719 |
+ |
(A)n |
Simple_repeat |
| scaffold24265 |
51864 |
52093 |
+ |
RS16888 |
Unspecified |
| scaffold24265 |
52699 |
52871 |
- |
RS2663 |
Unspecified |
| scaffold24265 |
52906 |
53162 |
+ |
RS8256 |
Unspecified |
| scaffold24265 |
53073 |
53290 |
+ |
RS1582 |
Unspecified |
| scaffold24265 |
53156 |
53307 |
+ |
RS1943 |
Unspecified |
| scaffold24265 |
53233 |
53505 |
+ |
RS10417 |
Unspecified |
| scaffold24265 |
53666 |
53780 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold24265 |
53821 |
54003 |
- |
SHAMUDRAV_MT |
DNA/MULE-MuDR |
| scaffold24265 |
53843 |
54066 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold24265 |
53919 |
54095 |
+ |
(TAA)n |
Simple_repeat |
| scaffold24265 |
54112 |
54228 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold24265 |
54405 |
54662 |
- |
RS2069 |
Unspecified |
| scaffold24265 |
54446 |
54662 |
- |
RS556 |
Unspecified |
| scaffold24265 |
54662 |
55056 |
+ |
RS1943 |
Unspecified |
| scaffold24265 |
55065 |
55095 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold24265 |
57148 |
57248 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold24265 |
57422 |
57566 |
+ |
RS115 |
Unspecified |
| scaffold24265 |
57915 |
58183 |
- |
RS310 |
Unspecified |
| scaffold24265 |
58316 |
58375 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold24265 |
58348 |
58408 |
+ |
A-rich |
Low_complexity |