scaffold25442 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold25442 |
24 |
547 |
- |
RS403 |
Unspecified |
| scaffold25442 |
739 |
810 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold25442 |
1032 |
1573 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold25442 |
1450 |
1507 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold25442 |
1592 |
2035 |
+ |
PL486 |
Unspecified |
| scaffold25442 |
2056 |
2097 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold25442 |
2339 |
2371 |
+ |
A-rich |
Low_complexity |
| scaffold25442 |
2730 |
2784 |
+ |
(TGTATT)n |
Simple_repeat |
| scaffold25442 |
3022 |
3119 |
+ |
(AGT)n |
Simple_repeat |
| scaffold25442 |
3070 |
3128 |
+ |
(GTAAT)n |
Simple_repeat |
| scaffold25442 |
3070 |
3232 |
+ |
(GTAAT)n |
Simple_repeat |
| scaffold25442 |
3118 |
3232 |
+ |
RS3852 |
Unspecified |
| scaffold25442 |
3419 |
3464 |
+ |
A-rich |
Low_complexity |
| scaffold25442 |
4254 |
4272 |
+ |
(A)n |
Simple_repeat |
| scaffold25442 |
4353 |
4644 |
- |
RS2001 |
Unspecified |
| scaffold25442 |
4651 |
4682 |
+ |
(TTG)n |
Simple_repeat |
| scaffold25442 |
4698 |
4809 |
+ |
(GTGAGG)n |
Simple_repeat |
| scaffold25442 |
4824 |
4846 |
+ |
(TTG)n |
Simple_repeat |
| scaffold25442 |
4949 |
5067 |
+ |
(TAA)n |
Simple_repeat |
| scaffold25442 |
5078 |
5269 |
- |
RS1833 |
Unspecified |
| scaffold25442 |
5286 |
5316 |
- |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold25442 |
5716 |
5783 |
- |
TPN1_IN |
DNA/En-Spm |
| scaffold25442 |
5808 |
5904 |
+ |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold25442 |
5905 |
5937 |
- |
TPN1_IN |
DNA/En-Spm |
| scaffold25442 |
5938 |
5954 |
+ |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold25442 |
6072 |
6945 |
+ |
Copia-46_GM-I |
LTR/Copia |
| scaffold25442 |
7749 |
7940 |
+ |
PL794 |
Unspecified |
| scaffold25442 |
8193 |
8217 |
+ |
(T)n |
Simple_repeat |
| scaffold25442 |
8637 |
8711 |
+ |
(ATT)n |
Simple_repeat |
| scaffold25442 |
8866 |
8913 |
+ |
STOWAWAY2_ZM |
DNA/TcMar-Stowaway |
| scaffold25442 |
9514 |
9744 |
+ |
RS3430 |
Unspecified |
| scaffold25442 |
10277 |
10322 |
+ |
A-rich |
Low_complexity |
| scaffold25442 |
10407 |
10428 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold25442 |
10521 |
10775 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold25442 |
10952 |
11114 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold25442 |
11115 |
11180 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold25442 |
11181 |
11196 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold25442 |
11414 |
11462 |
+ |
A-rich |
Low_complexity |
| scaffold25442 |
13941 |
14212 |
- |
Harbinger |
DNA/PIF-Harbinger |
| scaffold25442 |
14188 |
14433 |
+ |
MtPH-M-2-IIa |
DNA/PIF-Harbinger |
| scaffold25442 |
14516 |
14639 |
- |
VHARB-N2_VV |
DNA/PIF-Harbinger |
| scaffold25442 |
14897 |
14918 |
+ |
(TCA)n |
Simple_repeat |
| scaffold25442 |
15295 |
15342 |
+ |
A-rich |
Low_complexity |
| scaffold25442 |
16672 |
17051 |
+ |
PL436 |
Unspecified |
| scaffold25442 |
17063 |
17480 |
- |
RS458 |
Unspecified |
| scaffold25442 |
18023 |
18058 |
+ |
(A)n |
Simple_repeat |
| scaffold25442 |
18183 |
18404 |
+ |
PL436 |
Unspecified |
| scaffold25442 |
18416 |
18833 |
- |
RS458 |
Unspecified |
| scaffold25442 |
19564 |
19780 |
+ |
GA-rich |
Low_complexity |
| scaffold25442 |
19659 |
19780 |
+ |
GA-rich |
Low_complexity |
| scaffold25442 |
19771 |
19996 |
- |
RS1746 |
Unspecified |
| scaffold25442 |
20178 |
20207 |
+ |
(AT)n |
Simple_repeat |
| scaffold25442 |
20318 |
20367 |
+ |
A-rich |
Low_complexity |
| scaffold25442 |
21743 |
21849 |
+ |
PL469 |
Unspecified |
| scaffold25442 |
21885 |
22140 |
- |
RS4 |
Unspecified |