scaffold25510 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold25510 |
1 |
412 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold25510 |
1014 |
1149 |
- |
Ogre-PT3_I-int |
LTR/Gypsy |
| scaffold25510 |
2221 |
2399 |
+ |
RS2619 |
Unspecified |
| scaffold25510 |
2368 |
2461 |
+ |
PL909 |
Unspecified |
| scaffold25510 |
4602 |
5333 |
- |
RS1496 |
Unspecified |
| scaffold25510 |
5396 |
5888 |
- |
RS1496 |
Unspecified |
| scaffold25510 |
8230 |
8373 |
- |
RS934 |
Unspecified |
| scaffold25510 |
9373 |
9410 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold25510 |
9534 |
10474 |
- |
PL36 |
Unspecified |
| scaffold25510 |
10755 |
10983 |
+ |
RS49 |
Unspecified |
| scaffold25510 |
11058 |
11123 |
+ |
RS383 |
Unspecified |
| scaffold25510 |
11468 |
11534 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold25510 |
11756 |
11804 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold25510 |
12048 |
12316 |
+ |
RS10 |
Unspecified |
| scaffold25510 |
13711 |
14391 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold25510 |
14742 |
14796 |
+ |
(ATGTAAT)n |
Simple_repeat |
| scaffold25510 |
14855 |
14900 |
+ |
A-rich |
Low_complexity |
| scaffold25510 |
17443 |
17510 |
+ |
(TC)n |
Simple_repeat |
| scaffold25510 |
17538 |
17729 |
+ |
(CCA)n |
Simple_repeat |
| scaffold25510 |
18433 |
18560 |
- |
RS8872 |
Unspecified |
| scaffold25510 |
18567 |
18623 |
+ |
(TAATTTA)n |
Simple_repeat |
| scaffold25510 |
18788 |
18906 |
- |
RS8591 |
Unspecified |
| scaffold25510 |
19100 |
19316 |
+ |
(TGG)n |
Simple_repeat |
| scaffold25510 |
19317 |
19359 |
+ |
(GTGGT)n |
Simple_repeat |
| scaffold25510 |
19602 |
19823 |
- |
RS3971 |
Unspecified |
| scaffold25510 |
19824 |
19866 |
- |
RS691 |
Unspecified |
| scaffold25510 |
20165 |
20776 |
- |
RS15 |
Unspecified |
| scaffold25510 |
20819 |
22053 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold25510 |
20819 |
21916 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold25510 |
20856 |
21887 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold25510 |
21888 |
22053 |
+ |
RS13672 |
Unspecified |
| scaffold25510 |
22419 |
22965 |
- |
RS856 |
Unspecified |
| scaffold25510 |
22954 |
23081 |
+ |
RS1397 |
Unspecified |
| scaffold25510 |
23076 |
23678 |
- |
ENSPM2_MT |
DNA/CMC-EnSpm |
| scaffold25510 |
23861 |
23894 |
+ |
(CAT)n |
Simple_repeat |
| scaffold25510 |
24172 |
24208 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold25510 |
24366 |
24517 |
- |
EnSpm-13_VV |
DNA/CMC-EnSpm |
| scaffold25510 |
24634 |
24660 |
+ |
(CAA)n |
Simple_repeat |
| scaffold25510 |
24680 |
24756 |
+ |
(ACA)n |
Simple_repeat |
| scaffold25510 |
24774 |
24965 |
+ |
RS2319 |
Unspecified |
| scaffold25510 |
24820 |
25481 |
- |
RS734 |
Unspecified |
| scaffold25510 |
26330 |
26902 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold25510 |
26928 |
27267 |
+ |
RS12612 |
Unspecified |
| scaffold25510 |
27891 |
28003 |
+ |
A-rich |
Low_complexity |
| scaffold25510 |
28323 |
28359 |
+ |
(ATG)n |
Simple_repeat |
| scaffold25510 |
28494 |
28539 |
+ |
(TAT)n |
Simple_repeat |
| scaffold25510 |
28663 |
28748 |
+ |
(TAT)n |
Simple_repeat |
| scaffold25510 |
29130 |
29265 |
+ |
RS641 |
Unspecified |
| scaffold25510 |
29479 |
29520 |
+ |
(AT)n |
Simple_repeat |
| scaffold25510 |
31490 |
31552 |
+ |
A-rich |
Low_complexity |
| scaffold25510 |
32433 |
32452 |
+ |
(A)n |
Simple_repeat |
| scaffold25510 |
33401 |
33606 |
+ |
RS7032 |
Unspecified |
| scaffold25510 |
33591 |
33841 |
+ |
Copia-58_ZM-I |
LTR/Copia |
| scaffold25510 |
34450 |
35694 |
+ |
Copia-58_ZM-I |
LTR/Copia |
| scaffold25510 |
36405 |
37830 |
+ |
Copia-44_ZM-I |
LTR/Copia |
| scaffold25510 |
38510 |
38543 |
+ |
(GTTCT)n |
Simple_repeat |
| scaffold25510 |
40530 |
40666 |
+ |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold25510 |
40949 |
42251 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold25510 |
42337 |
42480 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold25510 |
42936 |
44027 |
+ |
Atlantys1_I-int |
LTR/Gypsy |