scaffold25608 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold25608 |
1 |
47 |
+ |
(TA)n |
Simple_repeat |
| scaffold25608 |
75 |
307 |
+ |
PL169 |
Unspecified |
| scaffold25608 |
1337 |
1390 |
+ |
(ATATATT)n |
Simple_repeat |
| scaffold25608 |
1337 |
1577 |
+ |
(ATATATT)n |
Simple_repeat |
| scaffold25608 |
1374 |
1577 |
- |
PL469 |
Unspecified |
| scaffold25608 |
1470 |
1580 |
+ |
RS16025 |
Unspecified |
| scaffold25608 |
1497 |
1598 |
- |
RS14266 |
Unspecified |
| scaffold25608 |
1550 |
1676 |
+ |
(AATT)n |
Simple_repeat |
| scaffold25608 |
1605 |
1676 |
+ |
(AATT)n |
Simple_repeat |
| scaffold25608 |
1743 |
1804 |
+ |
(TTAGA)n |
Simple_repeat |
| scaffold25608 |
1889 |
1911 |
+ |
(AAAC)n |
Simple_repeat |
| scaffold25608 |
1982 |
2019 |
+ |
(GAATC)n |
Simple_repeat |
| scaffold25608 |
2421 |
2461 |
+ |
COP20_I_MT-int |
LTR/Copia |
| scaffold25608 |
3468 |
3543 |
+ |
(ATCATT)n |
Simple_repeat |
| scaffold25608 |
3824 |
3899 |
+ |
RS5488 |
Unspecified |
| scaffold25608 |
3910 |
3990 |
+ |
RS5488 |
Unspecified |
| scaffold25608 |
3996 |
4040 |
+ |
RS5488 |
Unspecified |
| scaffold25608 |
4056 |
4131 |
+ |
RS5488 |
Unspecified |
| scaffold25608 |
4155 |
4485 |
+ |
RS5488 |
Unspecified |
| scaffold25608 |
4711 |
4739 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold25608 |
4776 |
4885 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
5043 |
5082 |
+ |
(GAATC)n |
Simple_repeat |
| scaffold25608 |
5389 |
5539 |
+ |
RS17808 |
Unspecified |
| scaffold25608 |
5490 |
5688 |
- |
RS1714 |
Unspecified |
| scaffold25608 |
5533 |
5799 |
+ |
RS17808 |
Unspecified |
| scaffold25608 |
7253 |
7284 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold25608 |
7591 |
7780 |
+ |
(CAGAGA)n |
Simple_repeat |
| scaffold25608 |
7938 |
7972 |
+ |
(AAG)n |
Simple_repeat |
| scaffold25608 |
8705 |
9260 |
+ |
PL69 |
Unspecified |
| scaffold25608 |
9227 |
9269 |
+ |
RS15730 |
Unspecified |
| scaffold25608 |
9711 |
9758 |
- |
HAT-3N1_Mad |
DNA/hAT-Tip100 |
| scaffold25608 |
12041 |
12072 |
+ |
(GTTGTA)n |
Simple_repeat |
| scaffold25608 |
12368 |
12431 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold25608 |
12597 |
12720 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
12638 |
12720 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
13326 |
13373 |
+ |
RS13365 |
Unspecified |
| scaffold25608 |
13550 |
13599 |
- |
RS16392 |
Unspecified |
| scaffold25608 |
13556 |
13947 |
+ |
RS29 |
Unspecified |
| scaffold25608 |
14656 |
14811 |
- |
RS133 |
Unspecified |
| scaffold25608 |
14924 |
14969 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
15484 |
15516 |
+ |
(AGTTCG)n |
Simple_repeat |
| scaffold25608 |
15994 |
16043 |
- |
RS6823 |
Unspecified |
| scaffold25608 |
16126 |
16171 |
+ |
(TTTTGA)n |
Simple_repeat |
| scaffold25608 |
16172 |
16194 |
+ |
(TTTTAGA)n |
Simple_repeat |
| scaffold25608 |
16505 |
16571 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
16679 |
16750 |
- |
Gypsy-129_SBi-LTR |
LTR/Gypsy |
| scaffold25608 |
16819 |
16837 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
17368 |
17442 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold25608 |
17580 |
17638 |
+ |
(AGCTCG)n |
Simple_repeat |
| scaffold25608 |
17962 |
17980 |
+ |
(AT)n |
Simple_repeat |
| scaffold25608 |
23438 |
23456 |
+ |
(TCA)n |
Simple_repeat |
| scaffold25608 |
24766 |
24856 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
24874 |
24894 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
25034 |
25072 |
+ |
GA-rich |
Low_complexity |
| scaffold25608 |
25210 |
25265 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold25608 |
25350 |
25612 |
+ |
RS1 |
Unspecified |
| scaffold25608 |
26412 |
26440 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold25608 |
26565 |
26611 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold25608 |
26748 |
27057 |
+ |
RS1213 |
Unspecified |
| scaffold25608 |
27818 |
27854 |
+ |
(ATA)n |
Simple_repeat |
| scaffold25608 |
32943 |
32974 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
33250 |
33332 |
+ |
RS18358 |
Unspecified |
| scaffold25608 |
33708 |
33741 |
+ |
RS178 |
Unspecified |
| scaffold25608 |
34297 |
34344 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold25608 |
34786 |
34849 |
+ |
(CACTATA)n |
Simple_repeat |
| scaffold25608 |
36764 |
36830 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
36981 |
37006 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
37007 |
37044 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
37248 |
37270 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
37849 |
37896 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold25608 |
39213 |
39249 |
+ |
GA-rich |
Low_complexity |
| scaffold25608 |
39471 |
39478 |
+ |
(TTGTAT)n |
Simple_repeat |
| scaffold25608 |
39479 |
39514 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
39796 |
39830 |
+ |
(ATTCCTC)n |
Simple_repeat |
| scaffold25608 |
40957 |
41078 |
+ |
RS13883 |
Unspecified |
| scaffold25608 |
42764 |
42815 |
+ |
(GTG)n |
Simple_repeat |
| scaffold25608 |
43157 |
43173 |
+ |
(TAA)n |
Simple_repeat |
| scaffold25608 |
43174 |
43208 |
+ |
(TAT)n |
Simple_repeat |
| scaffold25608 |
43209 |
43215 |
+ |
(TAA)n |
Simple_repeat |
| scaffold25608 |
43446 |
43505 |
+ |
(AAC)n |
Simple_repeat |
| scaffold25608 |
49346 |
49362 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
52409 |
52427 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
55280 |
55315 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
55916 |
55977 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
56268 |
56318 |
+ |
RS18371 |
Unspecified |
| scaffold25608 |
56275 |
56314 |
- |
RS1854 |
Unspecified |
| scaffold25608 |
56463 |
56620 |
- |
PL744 |
Unspecified |
| scaffold25608 |
56739 |
56807 |
+ |
RS145 |
Unspecified |
| scaffold25608 |
57283 |
57330 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
58528 |
58565 |
+ |
(CACT)n |
Simple_repeat |
| scaffold25608 |
62456 |
62513 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
62695 |
62748 |
+ |
L1-15_Mad |
LINE/L1 |
| scaffold25608 |
70918 |
71023 |
+ |
RS15858 |
Unspecified |
| scaffold25608 |
72381 |
72420 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
72601 |
72706 |
+ |
RS15858 |
Unspecified |
| scaffold25608 |
74055 |
74084 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
74332 |
74367 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
75070 |
75166 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold25608 |
76294 |
76320 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
76429 |
76472 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold25608 |
77140 |
77166 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
77318 |
77406 |
+ |
(TAATCAA)n |
Simple_repeat |
| scaffold25608 |
77639 |
78169 |
+ |
PL803 |
Unspecified |
| scaffold25608 |
78163 |
78954 |
+ |
RS259 |
Unspecified |
| scaffold25608 |
80278 |
80336 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25608 |
80366 |
80447 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
80484 |
80513 |
+ |
(ATT)n |
Simple_repeat |
| scaffold25608 |
81425 |
81470 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold25608 |
81693 |
81720 |
+ |
(ATA)n |
Simple_repeat |
| scaffold25608 |
83283 |
83408 |
- |
PL157 |
Unspecified |
| scaffold25608 |
83422 |
83450 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
83968 |
83987 |
- |
RTE-1_STu |
LINE/RTE-BovB |
| scaffold25608 |
83988 |
84079 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold25608 |
89051 |
89056 |
+ |
(TGTTTG)n |
Simple_repeat |
| scaffold25608 |
89057 |
89081 |
+ |
(TG)n |
Simple_repeat |
| scaffold25608 |
91014 |
91038 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
91944 |
91985 |
+ |
(TTTCATT)n |
Simple_repeat |
| scaffold25608 |
94088 |
94118 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
94119 |
94140 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
94180 |
94506 |
- |
RS1275 |
Unspecified |
| scaffold25608 |
94512 |
94565 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
94969 |
94999 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold25608 |
95482 |
95510 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold25608 |
95511 |
95530 |
+ |
(TATTG)n |
Simple_repeat |
| scaffold25608 |
95675 |
95732 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold25608 |
97140 |
97193 |
+ |
(GAT)n |
Simple_repeat |
| scaffold25608 |
98941 |
98963 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
102657 |
102728 |
- |
EnSpm7_SB |
DNA/CMC-EnSpm |
| scaffold25608 |
104591 |
104630 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
106612 |
106872 |
- |
RS237 |
Unspecified |
| scaffold25608 |
106894 |
106919 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
106894 |
107025 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
106910 |
107025 |
- |
RS972 |
Unspecified |
| scaffold25608 |
107211 |
107232 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold25608 |
107360 |
107421 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
107465 |
107535 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
107525 |
107597 |
+ |
GA-rich |
Low_complexity |
| scaffold25608 |
108149 |
108357 |
+ |
RS1621 |
Unspecified |
| scaffold25608 |
108431 |
108462 |
+ |
(TG)n |
Simple_repeat |
| scaffold25608 |
108946 |
108969 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
110460 |
110478 |
+ |
(ATC)n |
Simple_repeat |
| scaffold25608 |
111053 |
111072 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
111662 |
111941 |
- |
RS458 |
Unspecified |
| scaffold25608 |
112055 |
112264 |
+ |
RS877 |
Unspecified |
| scaffold25608 |
112443 |
112492 |
+ |
(ATTGCTA)n |
Simple_repeat |
| scaffold25608 |
112988 |
113020 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
113041 |
113181 |
- |
RS4164 |
Unspecified |
| scaffold25608 |
113338 |
113563 |
+ |
PL859 |
Unspecified |
| scaffold25608 |
113758 |
113800 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25608 |
113940 |
113976 |
+ |
(CTTCTC)n |
Simple_repeat |
| scaffold25608 |
114157 |
114162 |
+ |
(AATTTAT)n |
Simple_repeat |
| scaffold25608 |
114163 |
114304 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold25608 |
114305 |
114411 |
+ |
(AATTTAT)n |
Simple_repeat |
| scaffold25608 |
115139 |
115233 |
- |
RS13929 |
Unspecified |
| scaffold25608 |
115520 |
115543 |
+ |
(GTAC)n |
Simple_repeat |
| scaffold25608 |
117115 |
117212 |
- |
RS16382 |
Unspecified |
| scaffold25608 |
117291 |
117313 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
117987 |
118234 |
+ |
RS17600 |
Unspecified |
| scaffold25608 |
118995 |
119053 |
+ |
(CCACCA)n |
Simple_repeat |
| scaffold25608 |
120061 |
120077 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
123558 |
123813 |
+ |
RS6376 |
Unspecified |
| scaffold25608 |
124518 |
124584 |
+ |
(GCGCCTT)n |
Simple_repeat |
| scaffold25608 |
129920 |
129956 |
- |
PL640 |
Unspecified |
| scaffold25608 |
130066 |
130214 |
+ |
(CGGGC)n |
Simple_repeat |
| scaffold25608 |
130066 |
130096 |
+ |
(CGGGC)n |
Simple_repeat |
| scaffold25608 |
130089 |
130214 |
+ |
RS9599 |
Unspecified |
| scaffold25608 |
130112 |
130285 |
- |
RS778 |
Unspecified |
| scaffold25608 |
130421 |
130562 |
+ |
(CT)n |
Simple_repeat |
| scaffold25608 |
130628 |
130687 |
+ |
(TTG)n |
Simple_repeat |
| scaffold25608 |
132543 |
132595 |
- |
PL958 |
Unspecified |
| scaffold25608 |
132753 |
132787 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold25608 |
133349 |
133378 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold25608 |
134790 |
134827 |
+ |
(AAGTGA)n |
Simple_repeat |
| scaffold25608 |
135821 |
135917 |
- |
RS16382 |
Unspecified |
| scaffold25608 |
136128 |
136195 |
+ |
(TCTTCAA)n |
Simple_repeat |
| scaffold25608 |
140011 |
140131 |
+ |
RS63 |
Unspecified |
| scaffold25608 |
140025 |
140160 |
+ |
RS63 |
Unspecified |
| scaffold25608 |
140367 |
140396 |
+ |
(TCA)n |
Simple_repeat |
| scaffold25608 |
140668 |
140728 |
+ |
(ATGGTG)n |
Simple_repeat |
| scaffold25608 |
141178 |
141214 |
+ |
(TTG)n |
Simple_repeat |
| scaffold25608 |
141308 |
141344 |
+ |
(TTG)n |
Simple_repeat |
| scaffold25608 |
141438 |
141474 |
+ |
(TTG)n |
Simple_repeat |
| scaffold25608 |
144951 |
144984 |
+ |
(AAG)n |
Simple_repeat |
| scaffold25608 |
145535 |
145674 |
+ |
RS13085 |
Unspecified |
| scaffold25608 |
145566 |
145699 |
- |
PL517 |
Unspecified |
| scaffold25608 |
147910 |
147960 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold25608 |
148533 |
148590 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
148966 |
148988 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
150748 |
150803 |
+ |
hAT-N3_STu |
DNA/hAT-Ac |
| scaffold25608 |
151045 |
151091 |
+ |
(ATTTGTA)n |
Simple_repeat |
| scaffold25608 |
151410 |
151440 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25608 |
151730 |
151761 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
152866 |
152917 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold25608 |
152943 |
152986 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold25608 |
155650 |
155675 |
+ |
(GTCGTG)n |
Simple_repeat |
| scaffold25608 |
156017 |
156033 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
156216 |
156307 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold25608 |
156600 |
156690 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold25608 |
156691 |
156707 |
+ |
LT1_EPa |
LTR? |
| scaffold25608 |
157041 |
157086 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold25608 |
157108 |
157136 |
+ |
(TAT)n |
Simple_repeat |
| scaffold25608 |
157178 |
157209 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold25608 |
157215 |
157246 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25608 |
157407 |
157436 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold25608 |
157507 |
157531 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
159407 |
159448 |
- |
Monkey_MA |
LTR/Gypsy |
| scaffold25608 |
159793 |
160539 |
+ |
RS6422 |
Unspecified |
| scaffold25608 |
160539 |
161197 |
+ |
RS802 |
Unspecified |
| scaffold25608 |
162842 |
162859 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
163693 |
163714 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
164858 |
164891 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold25608 |
165760 |
165796 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold25608 |
165834 |
165883 |
+ |
(TCA)n |
Simple_repeat |
| scaffold25608 |
166238 |
166289 |
+ |
(CGG)n |
Simple_repeat |
| scaffold25608 |
168324 |
168347 |
+ |
(GCT)n |
Simple_repeat |
| scaffold25608 |
168540 |
168661 |
+ |
GA-rich |
Low_complexity |
| scaffold25608 |
169303 |
169443 |
- |
RS2611 |
Unspecified |
| scaffold25608 |
169402 |
169517 |
+ |
RS7065 |
Unspecified |
| scaffold25608 |
169580 |
169902 |
- |
RS1649 |
Unspecified |
| scaffold25608 |
169899 |
170012 |
+ |
RS9228 |
Unspecified |
| scaffold25608 |
170105 |
170156 |
+ |
(CGAAT)n |
Simple_repeat |
| scaffold25608 |
170389 |
170435 |
- |
ATMU8 |
DNA/MULE-MuDR |
| scaffold25608 |
173782 |
173805 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
174122 |
174160 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
174332 |
174411 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
177733 |
177793 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold25608 |
177956 |
177993 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
178483 |
178504 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
178755 |
178802 |
+ |
PL261 |
Unspecified |
| scaffold25608 |
178778 |
179215 |
+ |
PL261 |
Unspecified |
| scaffold25608 |
179597 |
179836 |
- |
RS898 |
Unspecified |
| scaffold25608 |
179991 |
180026 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold25608 |
180265 |
180505 |
- |
RS4 |
Unspecified |
| scaffold25608 |
181463 |
181510 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
185960 |
185996 |
- |
RS726 |
Unspecified |
| scaffold25608 |
185995 |
186117 |
- |
RS726 |
Unspecified |
| scaffold25608 |
186420 |
186465 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
187252 |
187274 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold25608 |
188202 |
188234 |
+ |
(ATT)n |
Simple_repeat |
| scaffold25608 |
188235 |
188247 |
+ |
(CATTAT)n |
Simple_repeat |
| scaffold25608 |
188402 |
188431 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
188849 |
188941 |
- |
RS4475 |
Unspecified |
| scaffold25608 |
189489 |
189531 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
189664 |
189746 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold25608 |
190683 |
190722 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
191132 |
191173 |
+ |
(ATC)n |
Simple_repeat |
| scaffold25608 |
191640 |
191704 |
+ |
Caulimovirus-1_BD |
LTR/Caulimovirus |
| scaffold25608 |
192101 |
192149 |
+ |
MUDSOLD1 |
DNA/MULE-MuDR |
| scaffold25608 |
192841 |
192865 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
192841 |
192974 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
192862 |
192974 |
+ |
RS16836 |
Unspecified |
| scaffold25608 |
193177 |
193201 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
193299 |
193387 |
+ |
(ATA)n |
Simple_repeat |
| scaffold25608 |
193411 |
193438 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25608 |
194064 |
194250 |
- |
hAT-N5_SBi |
DNA/hAT-Ac |
| scaffold25608 |
194491 |
194695 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold25608 |
194899 |
195105 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold25608 |
195722 |
195740 |
+ |
(ATT)n |
Simple_repeat |
| scaffold25608 |
197093 |
197124 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
197386 |
197408 |
+ |
(TATT)n |
Simple_repeat |
| scaffold25608 |
197650 |
197984 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
197650 |
197716 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
197709 |
197984 |
- |
RS1 |
Unspecified |
| scaffold25608 |
197887 |
198010 |
+ |
RS15138 |
Unspecified |
| scaffold25608 |
198437 |
198563 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold25608 |
198945 |
199030 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25608 |
198984 |
199030 |
+ |
(AAT)n |
Simple_repeat |
| scaffold25608 |
199041 |
199148 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold25608 |
199791 |
199815 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
200075 |
200131 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold25608 |
201089 |
201136 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold25608 |
201137 |
201152 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold25608 |
201175 |
201231 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold25608 |
203261 |
203298 |
+ |
(ATTTCA)n |
Simple_repeat |
| scaffold25608 |
203381 |
203417 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
207677 |
207749 |
+ |
(CATAT)n |
Simple_repeat |
| scaffold25608 |
207946 |
208031 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
208303 |
208482 |
+ |
RS38 |
Unspecified |
| scaffold25608 |
209352 |
209379 |
+ |
(CTTTT)n |
Simple_repeat |
| scaffold25608 |
209762 |
209790 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
210151 |
210332 |
+ |
RS79 |
Unspecified |
| scaffold25608 |
214712 |
214738 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
214786 |
215118 |
- |
RS63 |
Unspecified |
| scaffold25608 |
215117 |
215144 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
215157 |
215227 |
- |
RS1076 |
Unspecified |
| scaffold25608 |
215229 |
215411 |
- |
RS63 |
Unspecified |
| scaffold25608 |
215568 |
215574 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold25608 |
215575 |
215598 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
215599 |
215613 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold25608 |
216083 |
216134 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
216263 |
216341 |
+ |
RS18022 |
Unspecified |
| scaffold25608 |
216274 |
216406 |
+ |
RS622 |
Unspecified |
| scaffold25608 |
216714 |
216746 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold25608 |
219468 |
219521 |
- |
RS7975 |
Unspecified |
| scaffold25608 |
220470 |
220714 |
+ |
RS8632 |
Unspecified |
| scaffold25608 |
221008 |
221295 |
+ |
(ATATGGT)n |
Simple_repeat |
| scaffold25608 |
221008 |
221065 |
+ |
(ATATGGT)n |
Simple_repeat |
| scaffold25608 |
221041 |
221295 |
+ |
RS594 |
Unspecified |
| scaffold25608 |
221801 |
221855 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
222058 |
222084 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
222623 |
222696 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold25608 |
224890 |
224915 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold25608 |
225054 |
225121 |
- |
RS12373 |
Unspecified |
| scaffold25608 |
226878 |
226912 |
+ |
(ATT)n |
Simple_repeat |
| scaffold25608 |
227230 |
227271 |
+ |
(TTAATTT)n |
Simple_repeat |
| scaffold25608 |
227272 |
227295 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold25608 |
227354 |
227380 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold25608 |
227724 |
227869 |
- |
RS908 |
Unspecified |
| scaffold25608 |
227880 |
228138 |
- |
RS1 |
Unspecified |
| scaffold25608 |
228142 |
228327 |
- |
RS908 |
Unspecified |
| scaffold25608 |
228349 |
228370 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
228537 |
228586 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold25608 |
229093 |
229117 |
+ |
(ATC)n |
Simple_repeat |
| scaffold25608 |
229309 |
229389 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold25608 |
230429 |
230484 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
233657 |
233698 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
233741 |
233784 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
234395 |
234444 |
+ |
(TTAAG)n |
Simple_repeat |
| scaffold25608 |
235133 |
235189 |
+ |
(AACA)n |
Simple_repeat |
| scaffold25608 |
235383 |
235409 |
+ |
(GCG)n |
Simple_repeat |
| scaffold25608 |
235428 |
235474 |
+ |
(TGT)n |
Simple_repeat |
| scaffold25608 |
235533 |
235571 |
+ |
(TTG)n |
Simple_repeat |
| scaffold25608 |
236455 |
236503 |
+ |
RS18111 |
Unspecified |
| scaffold25608 |
236464 |
236557 |
- |
RS16382 |
Unspecified |
| scaffold25608 |
236647 |
236683 |
+ |
(AATT)n |
Simple_repeat |
| scaffold25608 |
236872 |
237056 |
+ |
RS509 |
Unspecified |
| scaffold25608 |
237435 |
237452 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
237712 |
237766 |
+ |
(TTA)n |
Simple_repeat |
| scaffold25608 |
238126 |
238149 |
+ |
(GTT)n |
Simple_repeat |
| scaffold25608 |
238195 |
238563 |
+ |
RS8 |
Unspecified |
| scaffold25608 |
239866 |
239897 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold25608 |
241469 |
241509 |
+ |
RS15900 |
Unspecified |
| scaffold25608 |
241786 |
241803 |
+ |
(TA)n |
Simple_repeat |
| scaffold25608 |
241845 |
241873 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold25608 |
242099 |
242204 |
+ |
RS4475 |
Unspecified |
| scaffold25608 |
242197 |
242276 |
- |
RS233 |
Unspecified |
| scaffold25608 |
242273 |
242370 |
- |
RS18358 |
Unspecified |
| scaffold25608 |
242365 |
242477 |
+ |
RS2719 |
Unspecified |
| scaffold25608 |
242920 |
243102 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold25608 |
243294 |
243303 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold25608 |
243304 |
243324 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
243325 |
243338 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold25608 |
244235 |
244287 |
+ |
RS727 |
Unspecified |
| scaffold25608 |
244291 |
244394 |
+ |
RS170 |
Unspecified |
| scaffold25608 |
246166 |
246191 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
248890 |
249122 |
+ |
RS1298 |
Unspecified |
| scaffold25608 |
249304 |
249323 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
249431 |
250061 |
+ |
RS1868 |
Unspecified |
| scaffold25608 |
253492 |
253575 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
253990 |
254030 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
254074 |
254159 |
+ |
(AATT)n |
Simple_repeat |
| scaffold25608 |
254217 |
254253 |
+ |
(GTTAA)n |
Simple_repeat |
| scaffold25608 |
254695 |
254799 |
+ |
RS2052 |
Unspecified |
| scaffold25608 |
254755 |
254854 |
+ |
RS9348 |
Unspecified |
| scaffold25608 |
254974 |
255272 |
- |
RS513 |
Unspecified |
| scaffold25608 |
255789 |
255856 |
+ |
(TA)n |
Simple_repeat |
| scaffold25608 |
256075 |
256258 |
- |
RS178 |
Unspecified |
| scaffold25608 |
256580 |
256621 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
256663 |
256810 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold25608 |
257337 |
257391 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold25608 |
257406 |
257671 |
+ |
RS17600 |
Unspecified |
| scaffold25608 |
257638 |
257686 |
- |
RS17600 |
Unspecified |
| scaffold25608 |
259289 |
259334 |
+ |
(T)n |
Simple_repeat |
| scaffold25608 |
259627 |
259825 |
- |
RS17600 |
Unspecified |
| scaffold25608 |
260064 |
260478 |
- |
PL607 |
Unspecified |
| scaffold25608 |
261012 |
261174 |
- |
RS5 |
Unspecified |
| scaffold25608 |
261508 |
261592 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold25608 |
262025 |
262290 |
+ |
RS109 |
Unspecified |
| scaffold25608 |
262791 |
262819 |
+ |
A-rich |
Low_complexity |
| scaffold25608 |
263122 |
263166 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
263246 |
263293 |
+ |
(TTGATTA)n |
Simple_repeat |
| scaffold25608 |
263360 |
263381 |
+ |
(CGC)n |
Simple_repeat |
| scaffold25608 |
263421 |
263442 |
+ |
(GCC)n |
Simple_repeat |
| scaffold25608 |
264151 |
264445 |
+ |
RS11443 |
Unspecified |
| scaffold25608 |
266248 |
266264 |
+ |
(TTC)n |
Simple_repeat |
| scaffold25608 |
266882 |
266908 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold25608 |
270369 |
270624 |
+ |
RS1 |
Unspecified |
| scaffold25608 |
270931 |
271175 |
+ |
RS4 |
Unspecified |
| scaffold25608 |
272051 |
272128 |
+ |
(TTA)n |
Simple_repeat |
| scaffold25608 |
272789 |
272816 |
+ |
(A)n |
Simple_repeat |
| scaffold25608 |
273135 |
273168 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold25608 |
273318 |
273388 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold25608 |
275103 |
275411 |
- |
RS1111 |
Unspecified |
| scaffold25608 |
277178 |
277252 |
+ |
(TTTATAA)n |
Simple_repeat |
| scaffold25608 |
277422 |
277708 |
+ |
PL378 |
Unspecified |
| scaffold25608 |
277714 |
277740 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold25608 |
277714 |
278293 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold25608 |
277737 |
278293 |
- |
RS532 |
Unspecified |
| scaffold25608 |
278418 |
278447 |
+ |
(TAA)n |
Simple_repeat |
| scaffold25608 |
281776 |
281864 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold25608 |
281889 |
282003 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold25608 |
282676 |
282769 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold25608 |
282951 |
283008 |
+ |
GA-rich |
Low_complexity |
| scaffold25608 |
283441 |
284523 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold25608 |
284152 |
284940 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold25608 |
284524 |
284568 |
+ |
Copia-15_CP-I |
LTR/Copia |
| scaffold25608 |
284536 |
284573 |
+ |
Copia-44_ST-I |
LTR/Copia |
| scaffold25608 |
284624 |
284753 |
+ |
Copia-44_ST-I |
LTR/Copia |
| scaffold25608 |
284822 |
284880 |
+ |
Copia-44_ST-I |
LTR/Copia |
| scaffold25608 |
285050 |
285805 |
- |
RS246 |
Unspecified |
| scaffold25608 |
285050 |
285672 |
- |
PL219 |
Unspecified |
| scaffold25608 |
285690 |
286337 |
- |
RS1210 |
Unspecified |
| scaffold25608 |
287252 |
287290 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold25608 |
287631 |
287680 |
- |
Athila6B_I-int |
LTR/Gypsy |
| scaffold25608 |
287924 |
287972 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold25608 |
288531 |
288572 |
- |
Athila6B_I-int |
LTR/Gypsy |
| scaffold25608 |
288810 |
288841 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold25608 |
289040 |
289138 |
- |
Athila6B_I-int |
LTR/Gypsy |
| scaffold25608 |
289610 |
290137 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold25608 |
291094 |
291325 |
- |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold25608 |
292882 |
292920 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold25608 |
293268 |
293841 |
+ |
Copia-55_ST-I |
LTR/Copia |
| scaffold25608 |
295112 |
295644 |
- |
RS616 |
Unspecified |