scaffold2868 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2868 |
1 |
98 |
- |
RS1122 |
Unspecified |
| scaffold2868 |
181 |
225 |
+ |
(AGTTTTT)n |
Simple_repeat |
| scaffold2868 |
1600 |
1657 |
+ |
(TATG)n |
Simple_repeat |
| scaffold2868 |
3161 |
3210 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold2868 |
3586 |
3950 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold2868 |
4603 |
4641 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold2868 |
4642 |
4657 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold2868 |
5289 |
5553 |
- |
RS356 |
Unspecified |
| scaffold2868 |
5637 |
5731 |
- |
RS16382 |
Unspecified |
| scaffold2868 |
7345 |
7361 |
+ |
(T)n |
Simple_repeat |
| scaffold2868 |
7362 |
7502 |
+ |
(CATTTTT)n |
Simple_repeat |
| scaffold2868 |
7706 |
7912 |
+ |
RS6869 |
Unspecified |
| scaffold2868 |
8028 |
8155 |
- |
RS129 |
Unspecified |
| scaffold2868 |
8048 |
8169 |
+ |
RS1599 |
Unspecified |
| scaffold2868 |
8271 |
8414 |
- |
RS17160 |
Unspecified |
| scaffold2868 |
8412 |
8702 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold2868 |
8768 |
8946 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold2868 |
9108 |
9619 |
- |
RS3441 |
Unspecified |
| scaffold2868 |
11344 |
11366 |
+ |
(A)n |
Simple_repeat |
| scaffold2868 |
11602 |
11650 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold2868 |
11858 |
12143 |
- |
RS102 |
Unspecified |
| scaffold2868 |
12148 |
12229 |
+ |
RS102 |
Unspecified |
| scaffold2868 |
12699 |
13020 |
- |
RS210 |
Unspecified |
| scaffold2868 |
13622 |
13781 |
- |
RS11843 |
Unspecified |
| scaffold2868 |
13826 |
13995 |
- |
RS12630 |
Unspecified |
| scaffold2868 |
14827 |
14970 |
+ |
RS917 |
Unspecified |
| scaffold2868 |
14852 |
15254 |
- |
RS7745 |
Unspecified |
| scaffold2868 |
15239 |
15342 |
- |
RS7745 |
Unspecified |
| scaffold2868 |
15270 |
15585 |
+ |
RS112 |
Unspecified |
| scaffold2868 |
15616 |
15764 |
- |
RS270 |
Unspecified |
| scaffold2868 |
15752 |
15860 |
+ |
RS112 |
Unspecified |
| scaffold2868 |
15869 |
16309 |
- |
RS917 |
Unspecified |
| scaffold2868 |
16309 |
16854 |
- |
RS917 |
Unspecified |
| scaffold2868 |
16844 |
16949 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold2868 |
16844 |
17000 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold2868 |
16930 |
17000 |
+ |
RS2753 |
Unspecified |
| scaffold2868 |
17403 |
17423 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold2868 |
17597 |
17631 |
+ |
(GTA)n |
Simple_repeat |
| scaffold2868 |
17652 |
17748 |
+ |
(TAA)n |
Simple_repeat |
| scaffold2868 |
17914 |
17953 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold2868 |
18097 |
18145 |
- |
RS112 |
Unspecified |
| scaffold2868 |
21577 |
21674 |
+ |
RS16836 |
Unspecified |
| scaffold2868 |
22579 |
22744 |
+ |
RS11638 |
Unspecified |
| scaffold2868 |
23603 |
23652 |
+ |
(ATCC)n |
Simple_repeat |
| scaffold2868 |
24056 |
24107 |
+ |
(TTA)n |
Simple_repeat |
| scaffold2868 |
24184 |
24514 |
- |
RS2503 |
Unspecified |
| scaffold2868 |
24356 |
24560 |
+ |
RS8945 |
Unspecified |
| scaffold2868 |
25441 |
25505 |
+ |
(AGATTAT)n |
Simple_repeat |
| scaffold2868 |
25563 |
25607 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold2868 |
26188 |
26226 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold2868 |
27393 |
27484 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold2868 |
27661 |
27755 |
+ |
PL402 |
Unspecified |
| scaffold2868 |
27661 |
27745 |
- |
RS25 |
Unspecified |
| scaffold2868 |
33414 |
33522 |
- |
RS12449 |
Unspecified |
| scaffold2868 |
33422 |
33513 |
+ |
RS4475 |
Unspecified |
| scaffold2868 |
33866 |
34086 |
+ |
RS1746 |
Unspecified |
| scaffold2868 |
34170 |
34218 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2868 |
34267 |
34297 |
+ |
(ATC)n |
Simple_repeat |
| scaffold2868 |
34371 |
34402 |
+ |
(A)n |
Simple_repeat |
| scaffold2868 |
34963 |
35124 |
+ |
RS38 |
Unspecified |
| scaffold2868 |
36694 |
36725 |
+ |
(TCT)n |
Simple_repeat |
| scaffold2868 |
37146 |
37183 |
- |
PL488 |
Unspecified |
| scaffold2868 |
38188 |
38256 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold2868 |
38289 |
38459 |
- |
RS573 |
Unspecified |
| scaffold2868 |
42719 |
42823 |
+ |
RS329 |
Unspecified |
| scaffold2868 |
42886 |
42937 |
+ |
A-rich |
Low_complexity |
| scaffold2868 |
45209 |
45241 |
+ |
(T)n |
Simple_repeat |
| scaffold2868 |
48177 |
48195 |
+ |
(T)n |
Simple_repeat |
| scaffold2868 |
51518 |
51536 |
+ |
(A)n |
Simple_repeat |
| scaffold2868 |
52887 |
52910 |
+ |
(TGA)n |
Simple_repeat |
| scaffold2868 |
54536 |
54700 |
- |
RS1042 |
Unspecified |
| scaffold2868 |
54964 |
55140 |
- |
RS38 |
Unspecified |
| scaffold2868 |
55197 |
55562 |
+ |
RS3550 |
Unspecified |
| scaffold2868 |
55681 |
55855 |
- |
RS1194 |
Unspecified |
| scaffold2868 |
61123 |
61163 |
- |
RS84 |
Unspecified |
| scaffold2868 |
61167 |
61260 |
- |
RS4 |
Unspecified |
| scaffold2868 |
61304 |
61377 |
- |
RS84 |
Unspecified |
| scaffold2868 |
61520 |
61548 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold2868 |
61860 |
61903 |
+ |
A-rich |
Low_complexity |
| scaffold2868 |
62112 |
62143 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold2868 |
62252 |
62289 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold2868 |
62632 |
62730 |
+ |
PL108 |
Unspecified |
| scaffold2868 |
63407 |
63442 |
+ |
(TGTATG)n |
Simple_repeat |
| scaffold2868 |
63443 |
63453 |
+ |
(TTGTA)n |
Simple_repeat |
| scaffold2868 |
68469 |
68932 |
+ |
RS1240 |
Unspecified |
| scaffold2868 |
69072 |
69110 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold2868 |
69589 |
69661 |
+ |
(AGT)n |
Simple_repeat |
| scaffold2868 |
69712 |
69742 |
+ |
(GTT)n |
Simple_repeat |
| scaffold2868 |
70637 |
70660 |
+ |
(T)n |
Simple_repeat |
| scaffold2868 |
71062 |
71095 |
+ |
(CGGTCG)n |
Simple_repeat |
| scaffold2868 |
71580 |
71622 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold2868 |
72132 |
72198 |
+ |
(GGT)n |
Simple_repeat |
| scaffold2868 |
72178 |
72229 |
+ |
(TGGTG)n |
Simple_repeat |
| scaffold2868 |
72510 |
72822 |
+ |
RS614 |
Unspecified |
| scaffold2868 |
73126 |
73165 |
+ |
A-rich |
Low_complexity |
| scaffold2868 |
73790 |
73875 |
+ |
RS13134 |
Unspecified |
| scaffold2868 |
74308 |
74350 |
+ |
(GTG)n |
Simple_repeat |
| scaffold2868 |
76410 |
76460 |
+ |
(CCACA)n |
Simple_repeat |
| scaffold2868 |
77439 |
77534 |
- |
RS4475 |
Unspecified |
| scaffold2868 |
77827 |
78025 |
+ |
RS167 |
Unspecified |
| scaffold2868 |
78161 |
78314 |
- |
RS2183 |
Unspecified |
| scaffold2868 |
78348 |
78372 |
+ |
(T)n |
Simple_repeat |
| scaffold2868 |
78595 |
78964 |
- |
RS1919 |
Unspecified |
| scaffold2868 |
78927 |
79657 |
+ |
RS458 |
Unspecified |
| scaffold2868 |
79708 |
79733 |
+ |
(T)n |
Simple_repeat |
| scaffold2868 |
79789 |
79834 |
+ |
A-rich |
Low_complexity |
| scaffold2868 |
80005 |
80032 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2868 |
80347 |
80391 |
+ |
(TTA)n |
Simple_repeat |
| scaffold2868 |
80779 |
80804 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold2868 |
81019 |
81059 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2868 |
81565 |
81617 |
+ |
RS5043 |
Unspecified |
| scaffold2868 |
81693 |
82000 |
+ |
RS5043 |
Unspecified |
| scaffold2868 |
81997 |
83569 |
- |
Copia-1_ST-I |
LTR/Copia |
| scaffold2868 |
83986 |
84850 |
- |
Copia-1_ST-I |
LTR/Copia |
| scaffold2868 |
85105 |
85238 |
- |
Copia-1_ST-I |
LTR/Copia |
| scaffold2868 |
85280 |
86470 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2868 |
85292 |
85413 |
- |
Copia-1_ST-I |
LTR/Copia |
| scaffold2868 |
85853 |
85965 |
- |
Copia-1_ST-I |
LTR/Copia |
| scaffold2868 |
86558 |
86625 |
+ |
A-rich |
Low_complexity |
| scaffold2868 |
86748 |
86907 |
+ |
RS5043 |
Unspecified |
| scaffold2868 |
87048 |
87074 |
+ |
(TTG)n |
Simple_repeat |
| scaffold2868 |
87593 |
87633 |
+ |
(TA)n |
Simple_repeat |
| scaffold2868 |
88145 |
88204 |
+ |
(TTTTGAT)n |
Simple_repeat |
| scaffold2868 |
88232 |
88481 |
+ |
RS3473 |
Unspecified |
| scaffold2868 |
88566 |
88598 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold2868 |
88791 |
88945 |
+ |
RS3473 |
Unspecified |
| scaffold2868 |
89018 |
89169 |
+ |
RS3203 |
Unspecified |
| scaffold2868 |
89159 |
89361 |
+ |
RS3203 |
Unspecified |
| scaffold2868 |
89357 |
89456 |
- |
RS94 |
Unspecified |
| scaffold2868 |
89446 |
89594 |
+ |
RS3203 |
Unspecified |
| scaffold2868 |
91017 |
91108 |
+ |
RS13185 |
Unspecified |
| scaffold2868 |
91115 |
91271 |
- |
RS3663 |
Unspecified |
| scaffold2868 |
91260 |
91546 |
- |
RS10737 |
Unspecified |
| scaffold2868 |
91652 |
91722 |
+ |
(TAT)n |
Simple_repeat |