scaffold2892 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold2892 |
4 |
251 |
+ |
RS2047 |
Unspecified |
| scaffold2892 |
100 |
451 |
+ |
RS2047 |
Unspecified |
| scaffold2892 |
189 |
557 |
+ |
RS911 |
Unspecified |
| scaffold2892 |
357 |
698 |
- |
RS192 |
Unspecified |
| scaffold2892 |
476 |
733 |
- |
RS192 |
Unspecified |
| scaffold2892 |
621 |
872 |
- |
RS192 |
Unspecified |
| scaffold2892 |
740 |
957 |
- |
RS192 |
Unspecified |
| scaffold2892 |
1345 |
1467 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold2892 |
2212 |
2316 |
- |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold2892 |
2990 |
3017 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold2892 |
3433 |
3486 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
3536 |
3573 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold2892 |
4474 |
4540 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold2892 |
5432 |
5479 |
+ |
(ATT)n |
Simple_repeat |
| scaffold2892 |
5634 |
5669 |
+ |
(AATTGC)n |
Simple_repeat |
| scaffold2892 |
5875 |
5906 |
+ |
(CTTCGT)n |
Simple_repeat |
| scaffold2892 |
5945 |
6397 |
- |
RS616 |
Unspecified |
| scaffold2892 |
6218 |
6752 |
+ |
PL880 |
Unspecified |
| scaffold2892 |
6921 |
7063 |
+ |
ATHILA-1_SBi-I |
LTR/Gypsy |
| scaffold2892 |
9561 |
9609 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
10163 |
10203 |
- |
Gypsy19-VV_I-int |
LTR/Gypsy |
| scaffold2892 |
11119 |
11643 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold2892 |
12106 |
12167 |
+ |
(GTAGTTG)n |
Simple_repeat |
| scaffold2892 |
12531 |
12770 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold2892 |
13434 |
13468 |
- |
Gypsy-127_SBi-I |
LTR/Gypsy |
| scaffold2892 |
13434 |
14082 |
- |
Gypsy-127_SBi-I |
LTR/Gypsy |
| scaffold2892 |
13453 |
14082 |
- |
PL219 |
Unspecified |
| scaffold2892 |
13467 |
14225 |
- |
RS246 |
Unspecified |
| scaffold2892 |
14107 |
14735 |
- |
RS1210 |
Unspecified |
| scaffold2892 |
15284 |
15789 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold2892 |
16727 |
17213 |
- |
PL755 |
Unspecified |
| scaffold2892 |
18718 |
18879 |
- |
RS77 |
Unspecified |
| scaffold2892 |
18871 |
19037 |
- |
RS741 |
Unspecified |
| scaffold2892 |
19010 |
19490 |
- |
RS944 |
Unspecified |
| scaffold2892 |
19407 |
19506 |
- |
RS944 |
Unspecified |
| scaffold2892 |
19436 |
19592 |
+ |
RS12377 |
Unspecified |
| scaffold2892 |
19668 |
19720 |
- |
RS944 |
Unspecified |
| scaffold2892 |
19785 |
19816 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold2892 |
20260 |
20334 |
+ |
RS12377 |
Unspecified |
| scaffold2892 |
20412 |
20464 |
- |
RS944 |
Unspecified |
| scaffold2892 |
20522 |
20552 |
+ |
(TATG)n |
Simple_repeat |
| scaffold2892 |
20612 |
20642 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold2892 |
21991 |
22309 |
+ |
RS11278 |
Unspecified |
| scaffold2892 |
22646 |
22773 |
+ |
RS1404 |
Unspecified |
| scaffold2892 |
23560 |
23726 |
- |
RS741 |
Unspecified |
| scaffold2892 |
23663 |
23852 |
- |
RS944 |
Unspecified |
| scaffold2892 |
23849 |
24030 |
- |
RS944 |
Unspecified |
| scaffold2892 |
24278 |
24317 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
27517 |
27558 |
+ |
(CAATTCC)n |
Simple_repeat |
| scaffold2892 |
29011 |
29164 |
+ |
RS14181 |
Unspecified |
| scaffold2892 |
31509 |
31524 |
+ |
(TAT)n |
Simple_repeat |
| scaffold2892 |
31525 |
31548 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
31875 |
31915 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold2892 |
31916 |
31950 |
+ |
(TT)n |
Simple_repeat |
| scaffold2892 |
32359 |
32623 |
+ |
RS82 |
Unspecified |
| scaffold2892 |
32664 |
32718 |
+ |
(CATACTA)n |
Simple_repeat |
| scaffold2892 |
32719 |
32780 |
+ |
(A)n |
Simple_repeat |
| scaffold2892 |
34369 |
34412 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
35529 |
35552 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
35770 |
35874 |
+ |
RS750 |
Unspecified |
| scaffold2892 |
36290 |
36503 |
+ |
RS537 |
Unspecified |
| scaffold2892 |
36667 |
36694 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2892 |
36790 |
36831 |
+ |
(TTAATTG)n |
Simple_repeat |
| scaffold2892 |
36963 |
37027 |
- |
ATHATN1 |
DNA/hAT-Ac |
| scaffold2892 |
37245 |
37334 |
+ |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold2892 |
37687 |
37733 |
- |
RS18371 |
Unspecified |
| scaffold2892 |
37902 |
37953 |
+ |
(ATA)n |
Simple_repeat |
| scaffold2892 |
38035 |
38081 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold2892 |
39700 |
39736 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
39802 |
39971 |
- |
PL961 |
Unspecified |
| scaffold2892 |
41067 |
41125 |
- |
RS17600 |
Unspecified |
| scaffold2892 |
41078 |
41342 |
+ |
RS17600 |
Unspecified |
| scaffold2892 |
41942 |
42185 |
- |
RS4 |
Unspecified |
| scaffold2892 |
42243 |
42400 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold2892 |
42342 |
42400 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold2892 |
42846 |
42870 |
+ |
(TAA)n |
Simple_repeat |
| scaffold2892 |
46633 |
46724 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold2892 |
53384 |
53487 |
+ |
GA-rich |
Low_complexity |
| scaffold2892 |
53535 |
53551 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
56543 |
56567 |
+ |
(ACA)n |
Simple_repeat |
| scaffold2892 |
56672 |
56769 |
+ |
GA-rich |
Low_complexity |
| scaffold2892 |
57112 |
57203 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold2892 |
57228 |
57268 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold2892 |
57269 |
57280 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold2892 |
58223 |
58251 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold2892 |
58403 |
58439 |
+ |
(CACGAC)n |
Simple_repeat |
| scaffold2892 |
63993 |
64609 |
- |
RS8069 |
Unspecified |
| scaffold2892 |
65341 |
65397 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold2892 |
65621 |
65750 |
- |
RS9395 |
Unspecified |
| scaffold2892 |
65787 |
65834 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
67346 |
67716 |
+ |
PL429 |
Unspecified |
| scaffold2892 |
67985 |
68088 |
- |
RS14169 |
Unspecified |
| scaffold2892 |
68239 |
68263 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
68303 |
68345 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold2892 |
68454 |
68494 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
69358 |
69402 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
69531 |
70053 |
- |
RS548 |
Unspecified |
| scaffold2892 |
70058 |
70145 |
- |
RS1172 |
Unspecified |
| scaffold2892 |
71276 |
71594 |
- |
RS172 |
Unspecified |
| scaffold2892 |
73871 |
74134 |
+ |
Copia-62_PT-I |
LTR/Copia |
| scaffold2892 |
74198 |
74233 |
+ |
(CGGATA)n |
Simple_repeat |
| scaffold2892 |
74369 |
74660 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold2892 |
74369 |
74428 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold2892 |
74411 |
74660 |
+ |
RS4645 |
Unspecified |
| scaffold2892 |
74541 |
74809 |
+ |
RS15534 |
Unspecified |
| scaffold2892 |
74817 |
74920 |
+ |
Copia-62_PT-I |
LTR/Copia |
| scaffold2892 |
74980 |
75243 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold2892 |
75000 |
75083 |
+ |
Copia-75_ST-I |
LTR/Copia |
| scaffold2892 |
75262 |
75443 |
- |
RS952 |
Unspecified |
| scaffold2892 |
76056 |
76079 |
+ |
(A)n |
Simple_repeat |
| scaffold2892 |
76589 |
76636 |
+ |
(TTTTAAT)n |
Simple_repeat |
| scaffold2892 |
76756 |
76984 |
+ |
RS3651 |
Unspecified |
| scaffold2892 |
77235 |
77277 |
+ |
(ATATTC)n |
Simple_repeat |
| scaffold2892 |
77288 |
77430 |
+ |
RS1743 |
Unspecified |
| scaffold2892 |
78745 |
78843 |
- |
RS8 |
Unspecified |
| scaffold2892 |
78751 |
78810 |
+ |
RS311 |
Unspecified |
| scaffold2892 |
78803 |
78864 |
- |
RS8 |
Unspecified |
| scaffold2892 |
79284 |
79472 |
+ |
RS13061 |
Unspecified |
| scaffold2892 |
79473 |
79853 |
+ |
RS1920 |
Unspecified |
| scaffold2892 |
80834 |
81055 |
- |
RS2543 |
Unspecified |
| scaffold2892 |
81055 |
81148 |
- |
RS13061 |
Unspecified |
| scaffold2892 |
87862 |
88047 |
- |
RS7275 |
Unspecified |
| scaffold2892 |
88281 |
88307 |
+ |
(GT)n |
Simple_repeat |
| scaffold2892 |
88320 |
88382 |
+ |
(TGT)n |
Simple_repeat |
| scaffold2892 |
89226 |
89457 |
- |
RS217 |
Unspecified |
| scaffold2892 |
89454 |
89543 |
+ |
RS649 |
Unspecified |
| scaffold2892 |
90249 |
90304 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
90405 |
90433 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold2892 |
91161 |
91203 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
92228 |
92263 |
+ |
(AT)n |
Simple_repeat |
| scaffold2892 |
92411 |
92785 |
- |
RS8 |
Unspecified |
| scaffold2892 |
92970 |
93009 |
+ |
(TTAATAA)n |
Simple_repeat |
| scaffold2892 |
93283 |
93415 |
- |
RS215 |
Unspecified |
| scaffold2892 |
93489 |
93522 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
93646 |
93686 |
+ |
A-rich |
Low_complexity |
| scaffold2892 |
95268 |
95342 |
- |
RS710 |
Unspecified |
| scaffold2892 |
96762 |
96874 |
+ |
RS306 |
Unspecified |
| scaffold2892 |
96884 |
97100 |
+ |
RS306 |
Unspecified |
| scaffold2892 |
97101 |
97234 |
+ |
RS172 |
Unspecified |
| scaffold2892 |
97693 |
97874 |
- |
RS1575 |
Unspecified |
| scaffold2892 |
98008 |
98114 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold2892 |
98097 |
98134 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold2892 |
99860 |
99951 |
+ |
G-rich |
Low_complexity |
| scaffold2892 |
101096 |
101112 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
101362 |
101383 |
+ |
(T)n |
Simple_repeat |
| scaffold2892 |
104363 |
104633 |
- |
RS1 |
Unspecified |
| scaffold2892 |
104764 |
104878 |
+ |
RS1187 |
Unspecified |
| scaffold2892 |
105249 |
105283 |
- |
RS1 |
Unspecified |
| scaffold2892 |
105253 |
105512 |
+ |
RS1 |
Unspecified |
| scaffold2892 |
106238 |
106254 |
+ |
(A)n |
Simple_repeat |
| scaffold2892 |
106530 |
106566 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold2892 |
107179 |
107212 |
+ |
(ATAACG)n |
Simple_repeat |
| scaffold2892 |
107396 |
107435 |
+ |
(TTA)n |
Simple_repeat |
| scaffold2892 |
107799 |
107817 |
+ |
(A)n |
Simple_repeat |
| scaffold2892 |
110365 |
110395 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold2892 |
110734 |
110807 |
+ |
(CCACCA)n |
Simple_repeat |
| scaffold2892 |
111206 |
111458 |
- |
RS2314 |
Unspecified |
| scaffold2892 |
111462 |
111606 |
- |
RS38 |
Unspecified |
| scaffold2892 |
112466 |
112583 |
+ |
RS84 |
Unspecified |
| scaffold2892 |
113777 |
113894 |
+ |
(ATTTTTC)n |
Simple_repeat |
| scaffold2892 |
114007 |
114034 |
+ |
(ATG)n |
Simple_repeat |
| scaffold2892 |
114159 |
114189 |
+ |
(ATG)n |
Simple_repeat |
| scaffold2892 |
114585 |
114654 |
+ |
(GGTGTT)n |
Simple_repeat |
| scaffold2892 |
115810 |
115834 |
+ |
(T)n |
Simple_repeat |