scaffold29537 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold29537 |
125 |
161 |
+ |
(T)n |
Simple_repeat |
| scaffold29537 |
281 |
347 |
- |
RS477 |
Unspecified |
| scaffold29537 |
320 |
461 |
- |
RS682 |
Unspecified |
| scaffold29537 |
415 |
1242 |
+ |
Copia-58_Mad-I |
LTR/Copia |
| scaffold29537 |
665 |
1010 |
- |
RS477 |
Unspecified |
| scaffold29537 |
1186 |
1250 |
- |
RS3935 |
Unspecified |
| scaffold29537 |
3494 |
3601 |
- |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold29537 |
3646 |
3741 |
- |
RS477 |
Unspecified |
| scaffold29537 |
3887 |
3939 |
+ |
(AAAAATT)n |
Simple_repeat |
| scaffold29537 |
4052 |
4086 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
5080 |
5139 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold29537 |
5954 |
6049 |
+ |
RS7678 |
Unspecified |
| scaffold29537 |
6252 |
6420 |
- |
RS1400 |
Unspecified |
| scaffold29537 |
6553 |
6707 |
- |
RS1857 |
Unspecified |
| scaffold29537 |
6680 |
6854 |
+ |
RS1450 |
Unspecified |
| scaffold29537 |
7499 |
7618 |
+ |
RS12135 |
Unspecified |
| scaffold29537 |
7701 |
7767 |
- |
RS38 |
Unspecified |
| scaffold29537 |
8514 |
8542 |
+ |
(T)n |
Simple_repeat |
| scaffold29537 |
8810 |
8875 |
+ |
(AAT)n |
Simple_repeat |
| scaffold29537 |
9074 |
9110 |
+ |
(AATGGAG)n |
Simple_repeat |
| scaffold29537 |
9364 |
9414 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
10240 |
10353 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold29537 |
11439 |
11679 |
- |
RS3935 |
Unspecified |
| scaffold29537 |
12185 |
12239 |
- |
MuDR-6_VV |
DNA/MULE-MuDR |
| scaffold29537 |
12423 |
12663 |
+ |
RS138 |
Unspecified |
| scaffold29537 |
13215 |
13455 |
- |
RS3935 |
Unspecified |
| scaffold29537 |
14678 |
14905 |
+ |
RS12728 |
Unspecified |
| scaffold29537 |
15009 |
15154 |
+ |
RS5850 |
Unspecified |
| scaffold29537 |
15025 |
15332 |
- |
RS8118 |
Unspecified |
| scaffold29537 |
15425 |
15635 |
+ |
RS10463 |
Unspecified |
| scaffold29537 |
16262 |
16406 |
- |
RS2006 |
Unspecified |
| scaffold29537 |
16456 |
16858 |
- |
RS5259 |
Unspecified |
| scaffold29537 |
19283 |
19386 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold29537 |
19441 |
19518 |
+ |
(AATTATT)n |
Simple_repeat |
| scaffold29537 |
19517 |
19584 |
+ |
RS7648 |
Unspecified |
| scaffold29537 |
20013 |
20209 |
+ |
RS152 |
Unspecified |
| scaffold29537 |
20175 |
20218 |
+ |
RS600 |
Unspecified |
| scaffold29537 |
20215 |
20338 |
- |
RS503 |
Unspecified |
| scaffold29537 |
20300 |
20355 |
- |
RS15122 |
Unspecified |
| scaffold29537 |
20893 |
21012 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold29537 |
21186 |
21238 |
+ |
G-rich |
Low_complexity |
| scaffold29537 |
22237 |
22459 |
- |
RS3935 |
Unspecified |
| scaffold29537 |
23032 |
23086 |
- |
MuDR-6_VV |
DNA/MULE-MuDR |
| scaffold29537 |
23742 |
23969 |
+ |
RS12728 |
Unspecified |
| scaffold29537 |
23999 |
24301 |
- |
RS8118 |
Unspecified |
| scaffold29537 |
25897 |
25939 |
+ |
(TATAGTA)n |
Simple_repeat |
| scaffold29537 |
26182 |
26341 |
+ |
ATCopia34_LTR |
LTR/Copia |
| scaffold29537 |
26479 |
26516 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold29537 |
27753 |
27957 |
+ |
RS428 |
Unspecified |
| scaffold29537 |
28451 |
28481 |
+ |
G-rich |
Low_complexity |
| scaffold29537 |
29582 |
29822 |
- |
RS16888 |
Unspecified |
| scaffold29537 |
30086 |
30134 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
30255 |
30317 |
+ |
(ATAATTA)n |
Simple_repeat |
| scaffold29537 |
30615 |
30637 |
+ |
(GTG)n |
Simple_repeat |
| scaffold29537 |
31811 |
32174 |
+ |
PL622 |
Unspecified |
| scaffold29537 |
32312 |
32539 |
- |
PL255 |
Unspecified |
| scaffold29537 |
33195 |
33234 |
+ |
(ATT)n |
Simple_repeat |
| scaffold29537 |
33590 |
33634 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold29537 |
33668 |
33694 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold29537 |
33939 |
34030 |
- |
RS16382 |
Unspecified |
| scaffold29537 |
34200 |
34309 |
- |
PL187 |
Unspecified |
| scaffold29537 |
34903 |
34940 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold29537 |
35954 |
36020 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
36284 |
36324 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
36409 |
36746 |
- |
PL853 |
Unspecified |
| scaffold29537 |
37143 |
37245 |
- |
RS4475 |
Unspecified |
| scaffold29537 |
37379 |
37626 |
+ |
RS4 |
Unspecified |
| scaffold29537 |
38560 |
38680 |
- |
RS1089 |
Unspecified |
| scaffold29537 |
38750 |
38802 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29537 |
38805 |
39021 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29537 |
39563 |
39670 |
+ |
RS4633 |
Unspecified |
| scaffold29537 |
40160 |
40287 |
+ |
RS1513 |
Unspecified |
| scaffold29537 |
40436 |
40566 |
- |
RS11117 |
Unspecified |
| scaffold29537 |
42004 |
42132 |
- |
RS9831 |
Unspecified |
| scaffold29537 |
42104 |
42183 |
- |
RS13349 |
Unspecified |
| scaffold29537 |
42610 |
42773 |
+ |
RS10947 |
Unspecified |
| scaffold29537 |
43569 |
43668 |
+ |
(ATTCAT)n |
Simple_repeat |
| scaffold29537 |
44786 |
44876 |
+ |
PL852 |
Unspecified |
| scaffold29537 |
44885 |
44915 |
+ |
(A)n |
Simple_repeat |
| scaffold29537 |
45861 |
45882 |
+ |
(AGG)n |
Simple_repeat |
| scaffold29537 |
46210 |
46226 |
+ |
(A)n |
Simple_repeat |
| scaffold29537 |
46516 |
46659 |
+ |
RS7685 |
Unspecified |
| scaffold29537 |
47906 |
47943 |
+ |
(AAGTAAG)n |
Simple_repeat |
| scaffold29537 |
48842 |
48952 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold29537 |
48953 |
48979 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
49407 |
49871 |
- |
L1-1_STu |
LINE/L1 |
| scaffold29537 |
50009 |
50257 |
+ |
G-rich |
Low_complexity |
| scaffold29537 |
50527 |
50575 |
+ |
(AATGAGG)n |
Simple_repeat |
| scaffold29537 |
50589 |
50691 |
- |
RS11610 |
Unspecified |
| scaffold29537 |
51788 |
51884 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
51904 |
52235 |
- |
L1-1_STu |
LINE/L1 |
| scaffold29537 |
52238 |
52335 |
+ |
(GGGTTAA)n |
Simple_repeat |
| scaffold29537 |
52335 |
52429 |
- |
RS4857 |
Unspecified |
| scaffold29537 |
52393 |
52468 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
52435 |
52468 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
52962 |
53017 |
+ |
SINE2-1_TAe |
SINE/tRNA |
| scaffold29537 |
54914 |
54949 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold29537 |
55711 |
55729 |
+ |
(TCT)n |
Simple_repeat |
| scaffold29537 |
56075 |
56135 |
+ |
(ATA)n |
Simple_repeat |
| scaffold29537 |
56538 |
56569 |
+ |
(GTT)n |
Simple_repeat |
| scaffold29537 |
59935 |
59972 |
+ |
(CTAATTTA)n |
Simple_repeat |
| scaffold29537 |
60458 |
60517 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
60721 |
60800 |
+ |
(TCT)n |
Simple_repeat |
| scaffold29537 |
60928 |
61035 |
+ |
(CCCCAA)n |
Simple_repeat |
| scaffold29537 |
62100 |
62204 |
+ |
RS16933 |
Unspecified |
| scaffold29537 |
62701 |
62880 |
+ |
RS16846 |
Unspecified |
| scaffold29537 |
63345 |
63404 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
63608 |
63687 |
+ |
(TCT)n |
Simple_repeat |
| scaffold29537 |
63815 |
63922 |
+ |
(CCCCAA)n |
Simple_repeat |
| scaffold29537 |
64987 |
65091 |
+ |
RS16933 |
Unspecified |
| scaffold29537 |
65620 |
65799 |
+ |
RS16846 |
Unspecified |
| scaffold29537 |
67822 |
67854 |
+ |
(AAAAGC)n |
Simple_repeat |
| scaffold29537 |
68639 |
68669 |
+ |
(A)n |
Simple_repeat |
| scaffold29537 |
69770 |
69846 |
- |
RS15543 |
Unspecified |
| scaffold29537 |
70299 |
70334 |
+ |
A-rich |
Low_complexity |
| scaffold29537 |
70747 |
70844 |
+ |
RS18078 |
Unspecified |
| scaffold29537 |
71276 |
71456 |
+ |
PL753 |
Unspecified |
| scaffold29537 |
71513 |
71547 |
+ |
(CTTTTG)n |
Simple_repeat |
| scaffold29537 |
71764 |
71938 |
+ |
(CCCGA)n |
Simple_repeat |