scaffold3399 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3399 |
139 |
200 |
+ |
(AATTATT)n |
Simple_repeat |
| scaffold3399 |
502 |
566 |
+ |
(TAC)n |
Simple_repeat |
| scaffold3399 |
567 |
578 |
+ |
(TTACTA)n |
Simple_repeat |
| scaffold3399 |
586 |
714 |
- |
RS4148 |
Unspecified |
| scaffold3399 |
779 |
865 |
+ |
(TAC)n |
Simple_repeat |
| scaffold3399 |
924 |
955 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold3399 |
1069 |
1327 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
1069 |
1126 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
1102 |
1327 |
+ |
PL494 |
Unspecified |
| scaffold3399 |
3015 |
3089 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold3399 |
3523 |
4544 |
+ |
RS821 |
Unspecified |
| scaffold3399 |
5425 |
5478 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold3399 |
5551 |
6093 |
+ |
RS3091 |
Unspecified |
| scaffold3399 |
5616 |
6128 |
- |
RS69 |
Unspecified |
| scaffold3399 |
5752 |
6608 |
- |
PL532 |
Unspecified |
| scaffold3399 |
7457 |
7716 |
+ |
RS2712 |
Unspecified |
| scaffold3399 |
8507 |
8555 |
+ |
(TTA)n |
Simple_repeat |
| scaffold3399 |
9346 |
9390 |
+ |
(CCTCAT)n |
Simple_repeat |
| scaffold3399 |
9473 |
10074 |
- |
RS931 |
Unspecified |
| scaffold3399 |
10354 |
10378 |
+ |
(AATA)n |
Simple_repeat |
| scaffold3399 |
11919 |
11954 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
12465 |
13822 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold3399 |
13857 |
14972 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold3399 |
13916 |
14155 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold3399 |
14424 |
14953 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold3399 |
15038 |
15321 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold3399 |
15328 |
15588 |
+ |
Gypsy-130_ZM-I |
LTR/Gypsy |
| scaffold3399 |
15756 |
15943 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold3399 |
16107 |
16166 |
+ |
(GCAGA)n |
Simple_repeat |
| scaffold3399 |
19433 |
19569 |
+ |
Copia-88_ST-LTR |
LTR/Copia |
| scaffold3399 |
19661 |
20722 |
+ |
RS265 |
Unspecified |
| scaffold3399 |
21206 |
21262 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold3399 |
21386 |
21427 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold3399 |
21564 |
21596 |
+ |
(T)n |
Simple_repeat |
| scaffold3399 |
22147 |
22182 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold3399 |
24776 |
24856 |
+ |
CACTA-P |
DNA/CMC-EnSpm |
| scaffold3399 |
25016 |
25042 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
25109 |
25376 |
- |
RS7563 |
Unspecified |
| scaffold3399 |
25771 |
25924 |
- |
RS7919 |
Unspecified |
| scaffold3399 |
25952 |
25988 |
+ |
(CA)n |
Simple_repeat |
| scaffold3399 |
26962 |
27123 |
- |
RS10248 |
Unspecified |
| scaffold3399 |
28148 |
28309 |
- |
RS9868 |
Unspecified |
| scaffold3399 |
28305 |
28468 |
- |
RS3080 |
Unspecified |
| scaffold3399 |
29143 |
29347 |
- |
CACTA-P |
DNA/CMC-EnSpm |
| scaffold3399 |
29476 |
29518 |
+ |
(TGA)n |
Simple_repeat |
| scaffold3399 |
32111 |
32316 |
- |
PL255 |
Unspecified |
| scaffold3399 |
34272 |
34753 |
- |
PL874 |
Unspecified |
| scaffold3399 |
35160 |
35190 |
+ |
(TATT)n |
Simple_repeat |
| scaffold3399 |
36061 |
36092 |
+ |
GA-rich |
Low_complexity |
| scaffold3399 |
36175 |
36284 |
+ |
(TGT)n |
Simple_repeat |
| scaffold3399 |
36324 |
36375 |
+ |
GA-rich |
Low_complexity |
| scaffold3399 |
36815 |
36850 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
36929 |
36967 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
36987 |
37082 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold3399 |
38720 |
38746 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
39461 |
39656 |
- |
RS126 |
Unspecified |
| scaffold3399 |
39668 |
39711 |
- |
RS126 |
Unspecified |
| scaffold3399 |
40330 |
40364 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
40399 |
40551 |
+ |
(TG)n |
Simple_repeat |
| scaffold3399 |
40602 |
40689 |
+ |
A-rich |
Low_complexity |
| scaffold3399 |
41347 |
41375 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold3399 |
41396 |
41468 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold3399 |
41484 |
41973 |
- |
RS126 |
Unspecified |
| scaffold3399 |
42360 |
42400 |
+ |
(TACATT)n |
Simple_repeat |
| scaffold3399 |
43252 |
43281 |
+ |
(ATCAT)n |
Simple_repeat |
| scaffold3399 |
43299 |
43357 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold3399 |
44092 |
44272 |
+ |
RS1329 |
Unspecified |
| scaffold3399 |
44814 |
44882 |
+ |
RS300 |
Unspecified |
| scaffold3399 |
44964 |
45005 |
+ |
A-rich |
Low_complexity |