genome | start | end | strand | repeat-name | repeat-class |
---|---|---|---|---|---|
scaffold3593 | 1 | 355 | - | PL433 | Unspecified |
scaffold3593 | 413 | 472 | - | Gypsy-9_Mad-I | LTR/Gypsy |
scaffold3593 | 742 | 935 | + | RS4644 | Unspecified |
scaffold3593 | 1020 | 1139 | + | RS4522 | Unspecified |
scaffold3593 | 1300 | 1363 | + | (TGG)n | Simple_repeat |
scaffold3593 | 1381 | 1390 | + | (GTTTTT)n | Simple_repeat |
scaffold3593 | 1391 | 1467 | + | (TTTTT)n | Simple_repeat |
scaffold3593 | 1608 | 1642 | + | (T)n | Simple_repeat |
scaffold3593 | 1898 | 1947 | + | A-rich | Low_complexity |
scaffold3593 | 1953 | 1992 | - | Gypsy-9_Mad-I | LTR/Gypsy |
scaffold3593 | 1993 | 2049 | - | Alfare1_I-int | LTR/Copia? |
scaffold3593 | 2050 | 2079 | - | Gypsy-9_Mad-I | LTR/Gypsy |
scaffold3593 | 3273 | 3302 | - | POPGY1_I-int | LTR/Gypsy |
scaffold3593 | 3303 | 3348 | - | Gypsy-10_Mad-I | LTR/Gypsy |
scaffold3593 | 4987 | 5110 | - | RS8497 | Unspecified |
scaffold3593 | 5007 | 5106 | + | RS13542 | Unspecified |
scaffold3593 | 5483 | 5537 | - | RS18072 | Unspecified |
scaffold3593 | 6234 | 6286 | + | A-rich | Low_complexity |
scaffold3593 | 6448 | 6691 | - | RS4 | Unspecified |
scaffold3593 | 8693 | 8724 | + | (TTGA)n | Simple_repeat |
scaffold3593 | 13050 | 13473 | - | PL227 | Unspecified |
scaffold3593 | 14664 | 14699 | + | (TTC)n | Simple_repeat |
scaffold3593 | 14755 | 14773 | + | (ACA)n | Simple_repeat |
scaffold3593 | 15209 | 15237 | + | (TGTGT)n | Simple_repeat |
scaffold3593 | 22172 | 22218 | + | (TGATTTGA)n | Simple_repeat |
scaffold3593 | 26563 | 26744 | + | RS79 | Unspecified |
scaffold3593 | 26779 | 26957 | + | RS79 | Unspecified |
scaffold3593 | 26981 | 27246 | - | RS10 | Unspecified |
scaffold3593 | 27358 | 27438 | + | (TAATAGG)n | Simple_repeat |
scaffold3593 | 27911 | 28277 | - | RS8 | Unspecified |
scaffold3593 | 28349 | 28371 | + | (T)n | Simple_repeat |
scaffold3593 | 30891 | 31060 | + | RS499 | Unspecified |
scaffold3593 | 31020 | 31190 | + | RS6043 | Unspecified |
scaffold3593 | 31052 | 31269 | + | RS499 | Unspecified |
scaffold3593 | 31642 | 31679 | + | (AACA)n | Simple_repeat |
scaffold3593 | 33506 | 33557 | + | A-rich | Low_complexity |
scaffold3593 | 33731 | 33749 | + | (T)n | Simple_repeat |
scaffold3593 | 33790 | 33900 | + | RS86 | Unspecified |
scaffold3593 | 33873 | 33943 | + | RS1829 | Unspecified |
scaffold3593 | 34559 | 34592 | + | A-rich | Low_complexity |
scaffold3593 | 34617 | 34830 | - | PL271 | Unspecified |
scaffold3593 | 34825 | 34984 | + | PL271 | Unspecified |
scaffold3593 | 35356 | 36567 | - | helitronORF | helitronORF(TransposonPSI) |
scaffold3593 | 40653 | 40677 | + | (A)n | Simple_repeat |
scaffold3593 | 41970 | 41992 | + | (A)n | Simple_repeat |
scaffold3593 | 42088 | 42112 | + | (CAC)n | Simple_repeat |
scaffold3593 | 42175 | 42197 | + | (ATAA)n | Simple_repeat |
scaffold3593 | 47275 | 47297 | + | (A)n | Simple_repeat |
scaffold3593 | 47493 | 47678 | + | RS2504 | Unspecified |
scaffold3593 | 47793 | 47814 | + | (T)n | Simple_repeat |
scaffold3593 | 48248 | 48459 | + | RS240 | Unspecified |
scaffold3593 | 48477 | 48707 | + | RS18 | Unspecified |
scaffold3593 | 48788 | 48995 | - | RS376 | Unspecified |
scaffold3593 | 48915 | 49022 | + | RS3380 | Unspecified |
scaffold3593 | 49098 | 49187 | - | PL653 | Unspecified |
scaffold3593 | 49691 | 49745 | + | (TAA)n | Simple_repeat |
scaffold3593 | 49891 | 49956 | + | GA-rich | Low_complexity |
scaffold3593 | 53244 | 53271 | + | (AATA)n | Simple_repeat |
scaffold3593 | 54830 | 54853 | + | (A)n | Simple_repeat |
scaffold3593 | 55947 | 55991 | + | A-rich | Low_complexity |
scaffold3593 | 57251 | 57287 | + | A-rich | Low_complexity |
scaffold3593 | 57816 | 57903 | - | LTR-7_Mad-LTR | LTR |
scaffold3593 | 58255 | 58296 | + | (GTG)n | Simple_repeat |
scaffold3593 | 58434 | 58585 | - | RS12287 | Unspecified |
scaffold3593 | 59168 | 59231 | + | A-rich | Low_complexity |
scaffold3593 | 59650 | 59839 | - | RS908 | Unspecified |
scaffold3593 | 60335 | 60364 | + | (AAT)n | Simple_repeat |
scaffold3593 | 60821 | 60848 | + | (AAAAT)n | Simple_repeat |
scaffold3593 | 63661 | 63678 | + | (TG)n | Simple_repeat |
scaffold3593 | 65077 | 65103 | + | A-rich | Low_complexity |
scaffold3593 | 65448 | 65494 | + | (T)n | Simple_repeat |
scaffold3593 | 69673 | 69725 | + | (TTT)n | Simple_repeat |
scaffold3593 | 70475 | 70562 | + | RS4475 | Unspecified |
scaffold3593 | 78001 | 78074 | - | RS18111 | Unspecified |
scaffold3593 | 79274 | 79538 | + | RS356 | Unspecified |
scaffold3593 | 79539 | 79923 | + | RS1188 | Unspecified |
scaffold3593 | 79934 | 80262 | + | RS925 | Unspecified |
scaffold3593 | 80940 | 81009 | + | GA-rich | Low_complexity |
scaffold3593 | 81151 | 81188 | + | (TCCTT)n | Simple_repeat |
scaffold3593 | 81286 | 81388 | + | RS16382 | Unspecified |
scaffold3593 | 81295 | 81401 | + | RS18316 | Unspecified |
scaffold3593 | 83749 | 83845 | - | PL652 | Unspecified |
scaffold3593 | 84064 | 84209 | - | RS5401 | Unspecified |
scaffold3593 | 85752 | 85793 | + | (TTTT)n | Simple_repeat |
scaffold3593 | 87031 | 87048 | + | (A)n | Simple_repeat |
scaffold3593 | 87154 | 87197 | + | (TTCATT)n | Simple_repeat |
scaffold3593 | 87585 | 87959 | + | RS491 | Unspecified |
scaffold3593 | 88273 | 88309 | + | (ATATTTT)n | Simple_repeat |
scaffold3593 | 88971 | 89130 | + | RS38 | Unspecified |
scaffold3593 | 89472 | 89494 | + | (TGAT)n | Simple_repeat |
scaffold3593 | 89601 | 89679 | - | RS549 | Unspecified |
scaffold3593 | 89691 | 89744 | - | RS549 | Unspecified |
scaffold3593 | 92412 | 92508 | - | RS4475 | Unspecified |
scaffold3593 | 92667 | 93033 | - | RS8 | Unspecified |
scaffold3593 | 93295 | 93352 | + | (TTTAT)n | Simple_repeat |
scaffold3593 | 94356 | 94401 | + | A-rich | Low_complexity |
scaffold3593 | 94451 | 94535 | - | LTR-2_MX-LTR | LTR |
scaffold3593 | 94552 | 94721 | - | RS347 | Unspecified |
scaffold3593 | 94990 | 95078 | - | LTR-2_MX-LTR | LTR |
scaffold3593 | 95800 | 95823 | + | (A)n | Simple_repeat |
scaffold3593 | 95845 | 96552 | - | RS214 | Unspecified |
scaffold3593 | 96542 | 96808 | + | RS17600 | Unspecified |
scaffold3593 | 96798 | 96857 | + | RS2987 | Unspecified |
scaffold3593 | 98076 | 98170 | + | (AACTG)n | Simple_repeat |
scaffold3593 | 98658 | 98809 | + | RS329 | Unspecified |
scaffold3593 | 99204 | 99306 | + | STOWAWAY13_SB | DNA/TcMar-Stowaway |
scaffold3593 | 100110 | 100490 | - | RS160 | Unspecified |
scaffold3593 | 100490 | 100604 | + | RS509 | Unspecified |
scaffold3593 | 101452 | 101545 | + | RS35 | Unspecified |
scaffold3593 | 101670 | 101740 | + | RS35 | Unspecified |
scaffold3593 | 101812 | 102211 | - | PL380 | Unspecified |
scaffold3593 | 102479 | 102538 | + | A-rich | Low_complexity |
scaffold3593 | 102852 | 102877 | + | (T)n | Simple_repeat |
scaffold3593 | 102963 | 103029 | + | (TTTAA)n | Simple_repeat |
scaffold3593 | 103072 | 103182 | + | A-rich | Low_complexity |
scaffold3593 | 103212 | 103250 | + | A-rich | Low_complexity |
scaffold3593 | 103344 | 103629 | - | PL688 | Unspecified |
scaffold3593 | 103663 | 104003 | + | RS918 | Unspecified |
scaffold3593 | 103851 | 104021 | - | RS1658 | Unspecified |
scaffold3593 | 104452 | 104491 | + | (TAT)n | Simple_repeat |
scaffold3593 | 104556 | 104656 | + | (CCCCTCG)n | Simple_repeat |
scaffold3593 | 104865 | 104935 | + | RS35 | Unspecified |
scaffold3593 | 105132 | 105184 | + | (ATTTTAC)n | Simple_repeat |
scaffold3593 | 110519 | 110573 | + | (A)n | Simple_repeat |
scaffold3593 | 111076 | 111124 | + | (TGT)n | Simple_repeat |
scaffold3593 | 112856 | 112907 | + | (ATTGT)n | Simple_repeat |
scaffold3593 | 112955 | 112990 | + | (TAAT)n | Simple_repeat |
scaffold3593 | 113515 | 113575 | + | A-rich | Low_complexity |
scaffold3593 | 114385 | 114462 | + | Copia-3_PTri-I | LTR/Copia |
scaffold3593 | 115014 | 115079 | + | A-rich | Low_complexity |
scaffold3593 | 115824 | 115857 | + | (ATTGT)n | Simple_repeat |
scaffold3593 | 118560 | 118580 | + | (T)n | Simple_repeat |
scaffold3593 | 126024 | 126063 | + | (TCC)n | Simple_repeat |
scaffold3593 | 126076 | 126143 | + | (T)n | Simple_repeat |
scaffold3593 | 126221 | 126262 | + | (GTTTT)n | Simple_repeat |
scaffold3593 | 130430 | 130457 | + | (GAACT)n | Simple_repeat |
scaffold3593 | 131649 | 131739 | + | RS504 | Unspecified |
scaffold3593 | 131749 | 131812 | + | A-rich | Low_complexity |
scaffold3593 | 131833 | 131864 | + | (T)n | Simple_repeat |
scaffold3593 | 132280 | 132309 | + | (TTTCTTT)n | Simple_repeat |
scaffold3593 | 132335 | 132410 | - | RS9503 | Unspecified |
scaffold3593 | 132479 | 132496 | + | (T)n | Simple_repeat |
scaffold3593 | 132748 | 133055 | - | RS1638 | Unspecified |
scaffold3593 | 133099 | 133130 | - | RS1638 | Unspecified |
scaffold3593 | 133275 | 133327 | - | ATHATN3A | DNA/hAT-Ac |
scaffold3593 | 133326 | 133387 | - | RS9503 | Unspecified |
scaffold3593 | 133385 | 133634 | + | RS326 | Unspecified |
scaffold3593 | 134826 | 134853 | + | (A)n | Simple_repeat |
scaffold3593 | 135010 | 135189 | + | RS4 | Unspecified |
scaffold3593 | 135967 | 136120 | - | STOWAWAY14_SB | DNA/TcMar-Stowaway |
scaffold3593 | 136206 | 136385 | - | RS79 | Unspecified |
scaffold3593 | 138814 | 138833 | + | (A)n | Simple_repeat |
scaffold3593 | 139124 | 139151 | + | (AAT)n | Simple_repeat |
scaffold3593 | 142455 | 142490 | + | (A)n | Simple_repeat |
scaffold3593 | 143656 | 143707 | + | GA-rich | Low_complexity |
scaffold3593 | 146183 | 146226 | + | GA-rich | Low_complexity |
scaffold3593 | 147162 | 147225 | + | A-rich | Low_complexity |
scaffold3593 | 152709 | 152746 | + | A-rich | Low_complexity |
scaffold3593 | 152809 | 152838 | + | A-rich | Low_complexity |
scaffold3593 | 155293 | 155324 | + | (CTTTC)n | Simple_repeat |
scaffold3593 | 156987 | 157039 | + | (C)n | Simple_repeat |
scaffold3593 | 157547 | 157594 | + | A-rich | Low_complexity |
scaffold3593 | 160611 | 160673 | + | A-rich | Low_complexity |
scaffold3593 | 161011 | 161055 | + | A-rich | Low_complexity |
scaffold3593 | 161556 | 161613 | + | (GGC)n | Simple_repeat |
scaffold3593 | 161817 | 161846 | + | (T)n | Simple_repeat |
scaffold3593 | 161844 | 161952 | - | RS3637 | Unspecified |
scaffold3593 | 162137 | 162170 | + | (AAAATC)n | Simple_repeat |
scaffold3593 | 162925 | 162959 | + | (TTAATA)n | Simple_repeat |
scaffold3593 | 164654 | 164737 | - | HADES_TA | DNA/TcMar-Stowaway |
scaffold3593 | 168214 | 168386 | + | RS11902 | Unspecified |
scaffold3593 | 168441 | 168683 | + | RS586 | Unspecified |
scaffold3593 | 168865 | 168944 | + | (AAT)n | Simple_repeat |
scaffold3593 | 168945 | 169181 | + | (ATA)n | Simple_repeat |