scaffold3766 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold3766 |
130 |
173 |
+ |
(AACAAT)n |
Simple_repeat |
scaffold3766 |
529 |
569 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
773 |
883 |
+ |
RS4475 |
Unspecified |
scaffold3766 |
947 |
1136 |
+ |
RS1621 |
Unspecified |
scaffold3766 |
1148 |
1245 |
- |
RS1 |
Unspecified |
scaffold3766 |
1253 |
1310 |
+ |
(TAA)n |
Simple_repeat |
scaffold3766 |
1312 |
1380 |
+ |
(TGAAC)n |
Simple_repeat |
scaffold3766 |
1575 |
1840 |
- |
RS26 |
Unspecified |
scaffold3766 |
2344 |
2445 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
scaffold3766 |
2655 |
2749 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold3766 |
2755 |
3259 |
- |
hAT-6_SBi |
DNA/hAT-Tip100 |
scaffold3766 |
3328 |
3349 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
3742 |
3765 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
4199 |
4294 |
+ |
LTR-2_MX-LTR |
LTR |
scaffold3766 |
4593 |
4657 |
+ |
LTR-2_MX-LTR |
LTR |
scaffold3766 |
4804 |
4865 |
+ |
(TATTAC)n |
Simple_repeat |
scaffold3766 |
5053 |
5080 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
5408 |
5441 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
5804 |
5847 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
5953 |
5990 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
6305 |
6369 |
+ |
(ATGAAG)n |
Simple_repeat |
scaffold3766 |
6908 |
6926 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
6943 |
7153 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold3766 |
8292 |
8367 |
+ |
(TAA)n |
Simple_repeat |
scaffold3766 |
10200 |
10241 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
10330 |
10383 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
10653 |
10683 |
+ |
(GGGCC)n |
Simple_repeat |
scaffold3766 |
11121 |
11301 |
- |
hAT-N5_SBi |
DNA/hAT-Ac |
scaffold3766 |
11319 |
11368 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
11374 |
11402 |
+ |
(ATG)n |
Simple_repeat |
scaffold3766 |
11403 |
11443 |
+ |
(GAG)n |
Simple_repeat |
scaffold3766 |
12052 |
12085 |
+ |
(AACAA)n |
Simple_repeat |
scaffold3766 |
12340 |
12385 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
12422 |
12547 |
+ |
RS3486 |
Unspecified |
scaffold3766 |
13178 |
13770 |
- |
PL359 |
Unspecified |
scaffold3766 |
13961 |
13986 |
+ |
(ATGAGT)n |
Simple_repeat |
scaffold3766 |
14526 |
14551 |
+ |
(ACC)n |
Simple_repeat |
scaffold3766 |
15089 |
15137 |
+ |
(ATTTTA)n |
Simple_repeat |
scaffold3766 |
15159 |
15220 |
+ |
(ATTAATA)n |
Simple_repeat |
scaffold3766 |
15502 |
15572 |
+ |
(TATATTT)n |
Simple_repeat |
scaffold3766 |
16930 |
16976 |
+ |
(AATC)n |
Simple_repeat |
scaffold3766 |
17832 |
18048 |
+ |
RS12287 |
Unspecified |
scaffold3766 |
20733 |
20775 |
+ |
(GGATGA)n |
Simple_repeat |
scaffold3766 |
26452 |
26480 |
+ |
(TCTTCA)n |
Simple_repeat |
scaffold3766 |
26611 |
26643 |
+ |
(AGGG)n |
Simple_repeat |
scaffold3766 |
26676 |
26699 |
+ |
(AGC)n |
Simple_repeat |
scaffold3766 |
26995 |
27036 |
+ |
(ATACCAA)n |
Simple_repeat |
scaffold3766 |
27320 |
27350 |
+ |
(TGTCA)n |
Simple_repeat |
scaffold3766 |
27436 |
27468 |
+ |
(ATACATT)n |
Simple_repeat |
scaffold3766 |
27836 |
27863 |
+ |
(TGAAT)n |
Simple_repeat |
scaffold3766 |
27864 |
27889 |
+ |
(GAAA)n |
Simple_repeat |
scaffold3766 |
27888 |
27960 |
+ |
(GAT)n |
Simple_repeat |
scaffold3766 |
28065 |
28100 |
+ |
(TTC)n |
Simple_repeat |
scaffold3766 |
28320 |
28341 |
+ |
(CATT)n |
Simple_repeat |
scaffold3766 |
29627 |
29652 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
29627 |
30002 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
29642 |
30002 |
+ |
RS7212 |
Unspecified |
scaffold3766 |
30042 |
30180 |
+ |
RS11422 |
Unspecified |
scaffold3766 |
30309 |
30378 |
+ |
(CAACAG)n |
Simple_repeat |
scaffold3766 |
30551 |
30703 |
+ |
RS11548 |
Unspecified |
scaffold3766 |
31035 |
31243 |
+ |
PL877 |
Unspecified |
scaffold3766 |
31271 |
31366 |
+ |
(ATGAGT)n |
Simple_repeat |
scaffold3766 |
31655 |
31706 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
31720 |
31738 |
+ |
(GTT)n |
Simple_repeat |
scaffold3766 |
31829 |
31889 |
+ |
(GAAGAT)n |
Simple_repeat |
scaffold3766 |
31952 |
31978 |
+ |
(GGGT)n |
Simple_repeat |
scaffold3766 |
32177 |
32214 |
+ |
(AAT)n |
Simple_repeat |
scaffold3766 |
32393 |
32414 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
33216 |
33295 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold3766 |
33348 |
33393 |
- |
RS908 |
Unspecified |
scaffold3766 |
33418 |
33472 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
33541 |
33567 |
+ |
(TCCG)n |
Simple_repeat |
scaffold3766 |
34240 |
34261 |
+ |
(TGTT)n |
Simple_repeat |
scaffold3766 |
35573 |
35624 |
+ |
(GA)n |
Simple_repeat |
scaffold3766 |
35947 |
35979 |
+ |
(TGA)n |
Simple_repeat |
scaffold3766 |
36016 |
36052 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
36822 |
37182 |
+ |
RS7212 |
Unspecified |
scaffold3766 |
37213 |
37351 |
+ |
RS11422 |
Unspecified |
scaffold3766 |
37348 |
37696 |
+ |
RS6348 |
Unspecified |
scaffold3766 |
37697 |
37849 |
+ |
RS11548 |
Unspecified |
scaffold3766 |
38189 |
38227 |
+ |
(ATG)n |
Simple_repeat |
scaffold3766 |
38228 |
38252 |
+ |
(GGTGAT)n |
Simple_repeat |
scaffold3766 |
38253 |
38268 |
+ |
(ATG)n |
Simple_repeat |
scaffold3766 |
38362 |
38513 |
+ |
PL216 |
Unspecified |
scaffold3766 |
38509 |
38876 |
- |
PL94 |
Unspecified |
scaffold3766 |
38831 |
38939 |
+ |
(TTA)n |
Simple_repeat |
scaffold3766 |
38878 |
38939 |
+ |
(TTA)n |
Simple_repeat |
scaffold3766 |
38971 |
39002 |
+ |
(TTA)n |
Simple_repeat |
scaffold3766 |
39003 |
39356 |
- |
RS29 |
Unspecified |
scaffold3766 |
39058 |
39358 |
- |
RS873 |
Unspecified |
scaffold3766 |
39350 |
39491 |
- |
RS120 |
Unspecified |
scaffold3766 |
40183 |
40195 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
40196 |
40240 |
+ |
(AAT)n |
Simple_repeat |
scaffold3766 |
40745 |
40875 |
- |
RS41 |
Unspecified |
scaffold3766 |
41289 |
41325 |
+ |
(TACA)n |
Simple_repeat |
scaffold3766 |
43838 |
43849 |
+ |
MuDR-5_VV |
DNA/MULE-MuDR |
scaffold3766 |
43850 |
43888 |
+ |
HELMET4 |
RC/Helitron |
scaffold3766 |
43889 |
43906 |
+ |
MuDR-5_VV |
DNA/MULE-MuDR |
scaffold3766 |
44013 |
44041 |
+ |
(AGT)n |
Simple_repeat |
scaffold3766 |
44128 |
44153 |
+ |
(TCCATT)n |
Simple_repeat |
scaffold3766 |
44789 |
44817 |
+ |
(ACAAA)n |
Simple_repeat |
scaffold3766 |
46803 |
46825 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
46826 |
46859 |
+ |
(TTATTAT)n |
Simple_repeat |
scaffold3766 |
46935 |
46972 |
+ |
(ATACACA)n |
Simple_repeat |
scaffold3766 |
49777 |
49877 |
- |
Gypsy-112_GM-I |
LTR/Gypsy |
scaffold3766 |
51604 |
51651 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
51827 |
51868 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
55035 |
55075 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
55167 |
55211 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
55377 |
55404 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
55588 |
55720 |
+ |
RS11230 |
Unspecified |
scaffold3766 |
57095 |
57133 |
+ |
(ATAACT)n |
Simple_repeat |
scaffold3766 |
57461 |
57501 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
57682 |
57809 |
- |
RS13542 |
Unspecified |
scaffold3766 |
57705 |
58036 |
+ |
RS2543 |
Unspecified |
scaffold3766 |
58176 |
58216 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
58293 |
58606 |
- |
RS2543 |
Unspecified |
scaffold3766 |
60160 |
60191 |
+ |
(ATG)n |
Simple_repeat |
scaffold3766 |
64073 |
64156 |
+ |
RS13020 |
Unspecified |
scaffold3766 |
64082 |
64155 |
- |
RS418 |
Unspecified |
scaffold3766 |
73241 |
73268 |
+ |
(AG)n |
Simple_repeat |
scaffold3766 |
73502 |
73592 |
- |
RS126 |
Unspecified |
scaffold3766 |
73603 |
73820 |
- |
RS14685 |
Unspecified |
scaffold3766 |
73991 |
74143 |
+ |
RS931 |
Unspecified |
scaffold3766 |
74580 |
74675 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold3766 |
75215 |
75749 |
- |
PL82 |
Unspecified |
scaffold3766 |
75752 |
75809 |
+ |
(CAT)n |
Simple_repeat |
scaffold3766 |
75836 |
75911 |
+ |
(ATA)n |
Simple_repeat |
scaffold3766 |
75912 |
75965 |
+ |
(AAC)n |
Simple_repeat |
scaffold3766 |
75912 |
76063 |
+ |
(AAC)n |
Simple_repeat |
scaffold3766 |
75959 |
76063 |
- |
RS8411 |
Unspecified |
scaffold3766 |
76087 |
76182 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
76641 |
77108 |
+ |
PL100 |
Unspecified |
scaffold3766 |
77247 |
77283 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
77328 |
77345 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
77745 |
77980 |
+ |
RS5215 |
Unspecified |
scaffold3766 |
77989 |
78092 |
- |
RS12449 |
Unspecified |
scaffold3766 |
78003 |
78110 |
+ |
RS4475 |
Unspecified |
scaffold3766 |
78114 |
78291 |
+ |
RS3698 |
Unspecified |
scaffold3766 |
78292 |
78365 |
- |
RS2339 |
Unspecified |
scaffold3766 |
78436 |
78474 |
+ |
(TTAATG)n |
Simple_repeat |
scaffold3766 |
78920 |
79015 |
- |
RS2339 |
Unspecified |
scaffold3766 |
79031 |
79057 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
79293 |
79366 |
- |
PL469 |
Unspecified |
scaffold3766 |
79757 |
79809 |
+ |
(TATAT)n |
Simple_repeat |
scaffold3766 |
79808 |
79846 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
80195 |
80754 |
- |
PL340 |
Unspecified |
scaffold3766 |
80848 |
80926 |
+ |
RS6409 |
Unspecified |
scaffold3766 |
80927 |
81483 |
- |
PL301 |
Unspecified |
scaffold3766 |
81484 |
81541 |
+ |
RS6409 |
Unspecified |
scaffold3766 |
81541 |
81675 |
+ |
PL100 |
Unspecified |
scaffold3766 |
81855 |
81888 |
+ |
(AGTAGTG)n |
Simple_repeat |
scaffold3766 |
82495 |
82537 |
+ |
Copia-94_VV-LTR |
LTR/Copia |
scaffold3766 |
87389 |
87408 |
+ |
(CTT)n |
Simple_repeat |
scaffold3766 |
87635 |
87776 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
87893 |
87920 |
+ |
(ATATG)n |
Simple_repeat |
scaffold3766 |
88113 |
88131 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
89799 |
89860 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
89963 |
90024 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
90305 |
90357 |
+ |
(TTATAAT)n |
Simple_repeat |
scaffold3766 |
90906 |
90931 |
+ |
(TCT)n |
Simple_repeat |
scaffold3766 |
90957 |
90995 |
+ |
(ATT)n |
Simple_repeat |
scaffold3766 |
91407 |
91810 |
+ |
RS3501 |
Unspecified |
scaffold3766 |
91532 |
91810 |
+ |
RS1559 |
Unspecified |
scaffold3766 |
92425 |
92565 |
+ |
RS635 |
Unspecified |
scaffold3766 |
93262 |
93503 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold3766 |
95121 |
95228 |
- |
RS17209 |
Unspecified |
scaffold3766 |
95139 |
95357 |
+ |
RS13658 |
Unspecified |
scaffold3766 |
97138 |
97293 |
+ |
RS4894 |
Unspecified |
scaffold3766 |
97671 |
98058 |
- |
RS203 |
Unspecified |
scaffold3766 |
98046 |
98652 |
+ |
RS337 |
Unspecified |
scaffold3766 |
100067 |
100336 |
- |
RS203 |
Unspecified |
scaffold3766 |
100491 |
100556 |
+ |
(TTAATT)n |
Simple_repeat |
scaffold3766 |
100580 |
100857 |
- |
PL861 |
Unspecified |
scaffold3766 |
101136 |
101229 |
+ |
RS16382 |
Unspecified |
scaffold3766 |
101142 |
101256 |
- |
RS93 |
Unspecified |
scaffold3766 |
101285 |
101317 |
+ |
(AATA)n |
Simple_repeat |
scaffold3766 |
101331 |
101568 |
+ |
RS109 |
Unspecified |
scaffold3766 |
101766 |
101827 |
+ |
(TTCTT)n |
Simple_repeat |
scaffold3766 |
101828 |
101851 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
103319 |
103417 |
- |
RS10521 |
Unspecified |
scaffold3766 |
104129 |
104152 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
105529 |
105559 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
107933 |
107984 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
108159 |
108176 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
108842 |
108863 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
109195 |
109289 |
+ |
RS4475 |
Unspecified |
scaffold3766 |
111643 |
111772 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold3766 |
112542 |
112570 |
+ |
(TAAA)n |
Simple_repeat |
scaffold3766 |
115372 |
115390 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
116701 |
116773 |
- |
Copia-23_Mad-I |
LTR/Copia |
scaffold3766 |
120823 |
120859 |
+ |
(CTACTTT)n |
Simple_repeat |
scaffold3766 |
122716 |
122790 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
124140 |
124163 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
127160 |
127205 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
127249 |
127272 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
127270 |
127333 |
+ |
(TTTAA)n |
Simple_repeat |
scaffold3766 |
127491 |
127517 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
127568 |
128175 |
+ |
PL221 |
Unspecified |
scaffold3766 |
130053 |
130130 |
+ |
(TA)n |
Simple_repeat |
scaffold3766 |
130174 |
130210 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
130658 |
130708 |
+ |
(TTAT)n |
Simple_repeat |
scaffold3766 |
130876 |
130910 |
+ |
(TTCTT)n |
Simple_repeat |
scaffold3766 |
131290 |
132356 |
+ |
(ACT)n |
Simple_repeat |
scaffold3766 |
132326 |
132356 |
+ |
(ACT)n |
Simple_repeat |
scaffold3766 |
132756 |
132880 |
- |
Gypsy-34_VV-LTR |
LTR/Gypsy |
scaffold3766 |
132907 |
132954 |
+ |
(TCT)n |
Simple_repeat |
scaffold3766 |
133117 |
133465 |
+ |
RS15302 |
Unspecified |
scaffold3766 |
133479 |
133504 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
133508 |
133689 |
- |
RS243 |
Unspecified |
scaffold3766 |
133557 |
133748 |
- |
RS243 |
Unspecified |
scaffold3766 |
134294 |
134323 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
134454 |
134578 |
+ |
RS9913 |
Unspecified |
scaffold3766 |
135579 |
136026 |
- |
Gypsy-46_Mad-I |
LTR/Gypsy |
scaffold3766 |
136273 |
136872 |
- |
Gypsy-46_Mad-I |
LTR/Gypsy |
scaffold3766 |
137548 |
137766 |
- |
Gypsy-46_Mad-I |
LTR/Gypsy |
scaffold3766 |
137793 |
137840 |
+ |
(TCT)n |
Simple_repeat |
scaffold3766 |
138162 |
138750 |
- |
PL919 |
Unspecified |
scaffold3766 |
138766 |
139220 |
- |
PL334 |
Unspecified |
scaffold3766 |
139120 |
139705 |
+ |
PL862 |
Unspecified |
scaffold3766 |
139850 |
139902 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
139912 |
139987 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
scaffold3766 |
140179 |
140688 |
+ |
RS403 |
Unspecified |
scaffold3766 |
140708 |
140735 |
+ |
(TTGA)n |
Simple_repeat |
scaffold3766 |
141317 |
141355 |
+ |
(ATC)n |
Simple_repeat |
scaffold3766 |
142104 |
142174 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
142942 |
142973 |
+ |
(ATG)n |
Simple_repeat |
scaffold3766 |
143711 |
143762 |
+ |
(ATGTTTC)n |
Simple_repeat |
scaffold3766 |
145825 |
145855 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
145990 |
146043 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
147498 |
147543 |
+ |
Vandal11 |
DNA/MULE-MuDR |
scaffold3766 |
150986 |
151056 |
+ |
(TAA)n |
Simple_repeat |
scaffold3766 |
151261 |
152032 |
- |
PL715 |
Unspecified |
scaffold3766 |
151360 |
152197 |
- |
RS1682 |
Unspecified |
scaffold3766 |
152429 |
152597 |
+ |
(TGTGAACT)n |
Simple_repeat |
scaffold3766 |
152429 |
152476 |
+ |
(TGTGAACT)n |
Simple_repeat |
scaffold3766 |
152469 |
152597 |
+ |
RS6612 |
Unspecified |
scaffold3766 |
152485 |
152650 |
+ |
RS3514 |
Unspecified |
scaffold3766 |
152648 |
152994 |
- |
PL294 |
Unspecified |
scaffold3766 |
153571 |
153588 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
153738 |
153783 |
+ |
(TTT)n |
Simple_repeat |
scaffold3766 |
154164 |
154197 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
155267 |
155369 |
+ |
RS1201 |
Unspecified |
scaffold3766 |
155311 |
155431 |
+ |
RS1201 |
Unspecified |
scaffold3766 |
155519 |
155682 |
- |
RS734 |
Unspecified |
scaffold3766 |
155774 |
155876 |
+ |
RS1201 |
Unspecified |
scaffold3766 |
155818 |
155938 |
+ |
RS1201 |
Unspecified |
scaffold3766 |
156536 |
156640 |
- |
RS7373 |
Unspecified |
scaffold3766 |
156627 |
156733 |
+ |
RS1201 |
Unspecified |
scaffold3766 |
156675 |
156795 |
+ |
RS1201 |
Unspecified |
scaffold3766 |
156844 |
156953 |
- |
PL368 |
Unspecified |
scaffold3766 |
157920 |
157938 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
158088 |
158136 |
+ |
(TTT)n |
Simple_repeat |
scaffold3766 |
158517 |
158550 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
159242 |
159270 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
160064 |
160094 |
+ |
(TTAAAT)n |
Simple_repeat |
scaffold3766 |
160467 |
160489 |
+ |
(GCC)n |
Simple_repeat |
scaffold3766 |
162138 |
162173 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
162387 |
162435 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
162639 |
162664 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
162787 |
162826 |
+ |
(GTATCG)n |
Simple_repeat |
scaffold3766 |
163386 |
163404 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
165167 |
165231 |
- |
ATHILA-5_SBi-I |
LTR/Gypsy |
scaffold3766 |
165824 |
166087 |
- |
RS17600 |
Unspecified |
scaffold3766 |
168026 |
168046 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
169414 |
169454 |
+ |
RS18407 |
Unspecified |
scaffold3766 |
169423 |
169786 |
- |
RS8 |
Unspecified |
scaffold3766 |
169966 |
170092 |
+ |
(CAGCT)n |
Simple_repeat |
scaffold3766 |
170699 |
170741 |
+ |
(TAT)n |
Simple_repeat |
scaffold3766 |
170783 |
170907 |
+ |
(CAGCT)n |
Simple_repeat |
scaffold3766 |
171163 |
171200 |
+ |
(CTT)n |
Simple_repeat |
scaffold3766 |
171215 |
171242 |
+ |
(ATT)n |
Simple_repeat |
scaffold3766 |
171601 |
171684 |
+ |
(TT)n |
Simple_repeat |
scaffold3766 |
174120 |
174185 |
- |
RS573 |
Unspecified |
scaffold3766 |
177540 |
177584 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
181900 |
181918 |
+ |
(TAC)n |
Simple_repeat |
scaffold3766 |
182343 |
182392 |
+ |
(AGAAGTG)n |
Simple_repeat |
scaffold3766 |
182431 |
182463 |
+ |
(GTGTAT)n |
Simple_repeat |
scaffold3766 |
183758 |
183807 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
183830 |
183856 |
+ |
(TCA)n |
Simple_repeat |
scaffold3766 |
183976 |
184006 |
+ |
(CTC)n |
Simple_repeat |
scaffold3766 |
191012 |
191043 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
193035 |
193078 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold3766 |
196031 |
196617 |
+ |
(TAATTAA)n |
Simple_repeat |
scaffold3766 |
196564 |
196617 |
+ |
(TAATTAA)n |
Simple_repeat |
scaffold3766 |
196707 |
196756 |
+ |
(TAA)n |
Simple_repeat |
scaffold3766 |
197056 |
197128 |
+ |
BvL1 |
LINE/L1 |
scaffold3766 |
197397 |
197581 |
- |
PL21 |
Unspecified |
scaffold3766 |
199030 |
199072 |
+ |
(AAT)n |
Simple_repeat |
scaffold3766 |
204178 |
204202 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
204271 |
204319 |
+ |
(AATAT)n |
Simple_repeat |
scaffold3766 |
205342 |
205443 |
+ |
RS17119 |
Unspecified |
scaffold3766 |
205979 |
206003 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
206246 |
206326 |
- |
RS5812 |
Unspecified |
scaffold3766 |
206734 |
206782 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
208053 |
208286 |
- |
RS581 |
Unspecified |
scaffold3766 |
208236 |
208293 |
- |
RS18361 |
Unspecified |
scaffold3766 |
208551 |
208748 |
+ |
RS13542 |
Unspecified |
scaffold3766 |
208879 |
208944 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
209217 |
209461 |
- |
RS4 |
Unspecified |
scaffold3766 |
210001 |
210124 |
+ |
RS549 |
Unspecified |
scaffold3766 |
210919 |
210959 |
+ |
(TTAT)n |
Simple_repeat |
scaffold3766 |
210995 |
211087 |
+ |
RS4475 |
Unspecified |
scaffold3766 |
211839 |
211855 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
212203 |
212232 |
+ |
(AAAT)n |
Simple_repeat |
scaffold3766 |
212599 |
212673 |
- |
HAT-N15_Mad |
DNA/hAT-Tip100 |
scaffold3766 |
217859 |
217966 |
+ |
(GGCGGT)n |
Simple_repeat |
scaffold3766 |
219618 |
219708 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold3766 |
220259 |
220296 |
+ |
(ATGTTC)n |
Simple_repeat |
scaffold3766 |
221636 |
221656 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
226508 |
226543 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
226625 |
226825 |
- |
RS16888 |
Unspecified |
scaffold3766 |
226888 |
226967 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold3766 |
226992 |
227038 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold3766 |
229570 |
229608 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
229726 |
230047 |
+ |
RS318 |
Unspecified |
scaffold3766 |
230203 |
230234 |
+ |
(TTTCT)n |
Simple_repeat |
scaffold3766 |
231078 |
231118 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
231596 |
231678 |
+ |
(TATTGA)n |
Simple_repeat |
scaffold3766 |
233110 |
233371 |
- |
RS185 |
Unspecified |
scaffold3766 |
233340 |
233553 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
233520 |
233553 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
234002 |
234104 |
+ |
RS919 |
Unspecified |
scaffold3766 |
234408 |
234458 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
234682 |
234737 |
+ |
GA-rich |
Low_complexity |
scaffold3766 |
235059 |
235171 |
- |
L1-1_STu |
LINE/L1 |
scaffold3766 |
235194 |
235199 |
+ |
(ATTT)n |
Simple_repeat |
scaffold3766 |
235200 |
235233 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
235234 |
235263 |
+ |
(ATTT)n |
Simple_repeat |
scaffold3766 |
235828 |
235861 |
+ |
(ATTTG)n |
Simple_repeat |
scaffold3766 |
236051 |
236070 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
237898 |
237928 |
+ |
(TCATTT)n |
Simple_repeat |
scaffold3766 |
241405 |
241465 |
+ |
(TTAT)n |
Simple_repeat |
scaffold3766 |
244005 |
244046 |
+ |
(TGTAT)n |
Simple_repeat |
scaffold3766 |
244191 |
244227 |
+ |
(ACATTTT)n |
Simple_repeat |
scaffold3766 |
244480 |
244606 |
- |
RS16588 |
Unspecified |
scaffold3766 |
244480 |
244627 |
+ |
RS86 |
Unspecified |
scaffold3766 |
245141 |
245157 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
245290 |
245328 |
+ |
(TTATT)n |
Simple_repeat |
scaffold3766 |
245428 |
245658 |
+ |
RS582 |
Unspecified |
scaffold3766 |
246444 |
246564 |
- |
RS16382 |
Unspecified |
scaffold3766 |
246568 |
246672 |
+ |
RS93 |
Unspecified |
scaffold3766 |
246580 |
246683 |
- |
RS16382 |
Unspecified |
scaffold3766 |
246715 |
246755 |
+ |
(AACCG)n |
Simple_repeat |
scaffold3766 |
246963 |
247141 |
+ |
(TTGGAT)n |
Simple_repeat |
scaffold3766 |
247149 |
247180 |
+ |
(AACCCG)n |
Simple_repeat |
scaffold3766 |
247521 |
247567 |
- |
RS15154 |
Unspecified |
scaffold3766 |
247650 |
247675 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
248108 |
248210 |
+ |
RS4475 |
Unspecified |
scaffold3766 |
248791 |
248814 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
250813 |
251557 |
+ |
(AACTG)n |
Simple_repeat |
scaffold3766 |
251339 |
251557 |
+ |
(AACTG)n |
Simple_repeat |
scaffold3766 |
251558 |
251609 |
+ |
(ACT)n |
Simple_repeat |
scaffold3766 |
251614 |
251648 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
scaffold3766 |
251646 |
251726 |
- |
RS656 |
Unspecified |
scaffold3766 |
251726 |
252346 |
+ |
RS1210 |
Unspecified |
scaffold3766 |
252236 |
252959 |
+ |
RS530 |
Unspecified |
scaffold3766 |
252326 |
253065 |
+ |
RS695 |
Unspecified |
scaffold3766 |
252361 |
253000 |
+ |
PL219 |
Unspecified |
scaffold3766 |
253640 |
253863 |
+ |
MEGY-I_MT |
LTR/Gypsy |
scaffold3766 |
254866 |
255365 |
+ |
MEGY-I_MT |
LTR/Gypsy |
scaffold3766 |
256239 |
256296 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
scaffold3766 |
256566 |
256610 |
+ |
(TTGGAATG)n |
Simple_repeat |
scaffold3766 |
256818 |
256874 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
257078 |
257162 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
scaffold3766 |
257653 |
258376 |
+ |
RS530 |
Unspecified |
scaffold3766 |
257794 |
258402 |
- |
PL411 |
Unspecified |
scaffold3766 |
258404 |
258495 |
- |
RS656 |
Unspecified |
scaffold3766 |
258862 |
259083 |
+ |
RS16888 |
Unspecified |
scaffold3766 |
258862 |
259053 |
- |
RS4 |
Unspecified |
scaffold3766 |
259876 |
259902 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold3766 |
260083 |
260121 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
262919 |
262935 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
264098 |
264149 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
264153 |
264188 |
+ |
(GAA)n |
Simple_repeat |
scaffold3766 |
264693 |
264837 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold3766 |
265058 |
265132 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold3766 |
265157 |
265208 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold3766 |
265245 |
265293 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
266046 |
266077 |
+ |
(TTTC)n |
Simple_repeat |
scaffold3766 |
266133 |
266157 |
+ |
(TG)n |
Simple_repeat |
scaffold3766 |
269358 |
269398 |
+ |
(CAGATAG)n |
Simple_repeat |
scaffold3766 |
269685 |
269709 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
275125 |
275258 |
+ |
RS18 |
Unspecified |
scaffold3766 |
275428 |
275444 |
+ |
(A)n |
Simple_repeat |
scaffold3766 |
276098 |
276149 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold3766 |
276098 |
276240 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold3766 |
276130 |
276240 |
- |
RS15944 |
Unspecified |
scaffold3766 |
276532 |
276564 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
277197 |
277233 |
+ |
(TAT)n |
Simple_repeat |
scaffold3766 |
277413 |
277420 |
+ |
(ATT)n |
Simple_repeat |
scaffold3766 |
277421 |
277453 |
+ |
(TATT)n |
Simple_repeat |
scaffold3766 |
277566 |
277664 |
+ |
RS1056 |
Unspecified |
scaffold3766 |
277763 |
277803 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
277980 |
278039 |
+ |
A-rich |
Low_complexity |
scaffold3766 |
279026 |
279250 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
scaffold3766 |
280426 |
280524 |
+ |
RS4475 |
Unspecified |
scaffold3766 |
281050 |
281108 |
- |
RS17891 |
Unspecified |
scaffold3766 |
281190 |
281248 |
- |
RS17891 |
Unspecified |
scaffold3766 |
281251 |
281318 |
+ |
RS727 |
Unspecified |
scaffold3766 |
281743 |
281855 |
+ |
RS1847 |
Unspecified |
scaffold3766 |
282075 |
282109 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
282385 |
282431 |
+ |
(TAAT)n |
Simple_repeat |
scaffold3766 |
283432 |
283611 |
- |
RS5 |
Unspecified |
scaffold3766 |
284612 |
284735 |
- |
RS8 |
Unspecified |
scaffold3766 |
285717 |
285766 |
+ |
(AT)n |
Simple_repeat |
scaffold3766 |
286176 |
286237 |
+ |
(TAAT)n |
Simple_repeat |
scaffold3766 |
286531 |
286557 |
+ |
(CAT)n |
Simple_repeat |
scaffold3766 |
286693 |
286769 |
+ |
(AATTC)n |
Simple_repeat |
scaffold3766 |
287255 |
288168 |
+ |
PL771 |
Unspecified |
scaffold3766 |
288440 |
288469 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
288474 |
288516 |
+ |
(TTCAA)n |
Simple_repeat |
scaffold3766 |
288681 |
288830 |
+ |
PL771 |
Unspecified |
scaffold3766 |
288881 |
288904 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
289104 |
289133 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
289138 |
289180 |
+ |
(TTCAA)n |
Simple_repeat |
scaffold3766 |
289526 |
289603 |
+ |
ZhAT2_ZM |
DNA/hAT-Tip100 |
scaffold3766 |
290385 |
290413 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold3766 |
290728 |
290817 |
- |
RS4475 |
Unspecified |
scaffold3766 |
290912 |
290928 |
+ |
(T)n |
Simple_repeat |
scaffold3766 |
291113 |
291175 |
- |
SINE2-1_STu |
SINE/tRNA |
scaffold3766 |
291211 |
291273 |
+ |
RS17211 |
Unspecified |
scaffold3766 |
291346 |
291591 |
+ |
RS4 |
Unspecified |
scaffold3766 |
292221 |
292325 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold3766 |
292350 |
292408 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold3766 |
292458 |
292503 |
+ |
(GGAAA)n |
Simple_repeat |
scaffold3766 |
292610 |
292645 |
+ |
(TAATAC)n |
Simple_repeat |
scaffold3766 |
292664 |
292698 |
+ |
(TTA)n |
Simple_repeat |
scaffold3766 |
292843 |
292883 |
+ |
(ATT)n |
Simple_repeat |
scaffold3766 |
292993 |
293112 |
+ |
RS4 |
Unspecified |
scaffold3766 |
293114 |
293534 |
+ |
PL3 |
Unspecified |
scaffold3766 |
293532 |
293650 |
+ |
RS4 |
Unspecified |
scaffold3766 |
294215 |
295152 |
+ |
RS402 |
Unspecified |
scaffold3766 |
295201 |
295237 |
+ |
(TCTTCAT)n |
Simple_repeat |
scaffold3766 |
295563 |
295770 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold3766 |
296173 |
296534 |
- |
RS8 |
Unspecified |
scaffold3766 |
301529 |
301597 |
+ |
(TTAA)n |
Simple_repeat |
scaffold3766 |
302484 |
302520 |
+ |
(ATTAT)n |
Simple_repeat |
scaffold3766 |
303101 |
303323 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold3766 |
303530 |
303557 |
+ |
(GGATAT)n |
Simple_repeat |
scaffold3766 |
303633 |
303715 |
- |
PL523 |
Unspecified |
scaffold3766 |
303647 |
303715 |
- |
PL613 |
Unspecified |
scaffold3766 |
303714 |
304617 |
+ |
RS355 |
Unspecified |
scaffold3766 |
304615 |
305495 |
+ |
RS355 |
Unspecified |
scaffold3766 |
304807 |
305640 |
- |
RS294 |
Unspecified |
scaffold3766 |
305632 |
305890 |
- |
PL613 |
Unspecified |
scaffold3766 |
306157 |
306232 |
+ |
(AATTAAT)n |
Simple_repeat |
scaffold3766 |
306364 |
306710 |
- |
PL283 |
Unspecified |
scaffold3766 |
306736 |
306821 |
- |
RS919 |
Unspecified |
scaffold3766 |
306821 |
306881 |
+ |
PL959 |
Unspecified |
scaffold3766 |
307166 |
307257 |
+ |
(TGGATA)n |
Simple_repeat |
scaffold3766 |
307405 |
307623 |
- |
PL169 |
Unspecified |
scaffold3766 |
307810 |
307937 |
- |
RS1599 |
Unspecified |
scaffold3766 |
308351 |
308471 |
- |
Copia-88_ST-LTR |
LTR/Copia |
scaffold3766 |
309976 |
310016 |
+ |
(TGTGTT)n |
Simple_repeat |
scaffold3766 |
312011 |
313403 |
- |
Gret1_I-int |
LTR/Gypsy |
scaffold3766 |
313452 |
313623 |
- |
Gret1_I-int |
LTR/Gypsy |