scaffold3850 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold3850 |
4 |
539 |
+ |
PL5 |
Unspecified |
scaffold3850 |
1208 |
1482 |
+ |
PL799 |
Unspecified |
scaffold3850 |
1562 |
1748 |
+ |
RS26 |
Unspecified |
scaffold3850 |
1818 |
1843 |
+ |
(AGGGG)n |
Simple_repeat |
scaffold3850 |
2495 |
2599 |
+ |
PL651 |
Unspecified |
scaffold3850 |
2590 |
2781 |
+ |
RS1334 |
Unspecified |
scaffold3850 |
3564 |
3581 |
+ |
(A)n |
Simple_repeat |
scaffold3850 |
4260 |
4389 |
+ |
RS1172 |
Unspecified |
scaffold3850 |
4276 |
4535 |
+ |
RS356 |
Unspecified |
scaffold3850 |
4534 |
4636 |
+ |
RS11189 |
Unspecified |
scaffold3850 |
4618 |
4923 |
+ |
RS8 |
Unspecified |
scaffold3850 |
5437 |
5773 |
- |
RS6506 |
Unspecified |
scaffold3850 |
5986 |
6025 |
+ |
(T)n |
Simple_repeat |
scaffold3850 |
6295 |
6507 |
- |
PL563 |
Unspecified |
scaffold3850 |
7216 |
7245 |
+ |
G-rich |
Low_complexity |
scaffold3850 |
7495 |
7873 |
- |
RS1367 |
Unspecified |
scaffold3850 |
11130 |
11761 |
- |
Copia10-VV_I-int |
LTR/Copia |
scaffold3850 |
12205 |
12512 |
- |
TORTL1 |
LTR/Copia |
scaffold3850 |
12519 |
13192 |
+ |
RS4002 |
Unspecified |
scaffold3850 |
13571 |
13593 |
+ |
(TCT)n |
Simple_repeat |
scaffold3850 |
18829 |
18940 |
+ |
RS2386 |
Unspecified |
scaffold3850 |
18939 |
19126 |
- |
RS10311 |
Unspecified |
scaffold3850 |
19387 |
19659 |
+ |
PL466 |
Unspecified |
scaffold3850 |
19844 |
20318 |
+ |
PL565 |
Unspecified |
scaffold3850 |
20163 |
20341 |
+ |
RS14079 |
Unspecified |
scaffold3850 |
21116 |
21147 |
+ |
A-rich |
Low_complexity |
scaffold3850 |
22195 |
22247 |
- |
RS17169 |
Unspecified |
scaffold3850 |
22662 |
23169 |
+ |
PL528 |
Unspecified |
scaffold3850 |
23384 |
23583 |
+ |
RS8855 |
Unspecified |
scaffold3850 |
25088 |
25134 |
+ |
(TAA)n |
Simple_repeat |
scaffold3850 |
25161 |
25290 |
+ |
RS6857 |
Unspecified |
scaffold3850 |
26282 |
26363 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
scaffold3850 |
26399 |
26533 |
+ |
Gypsy-40_BD-I |
LTR/Gypsy |
scaffold3850 |
26579 |
26760 |
- |
RS2011 |
Unspecified |
scaffold3850 |
26803 |
28996 |
- |
Copia-58_Mad-I |
LTR/Copia |
scaffold3850 |
29436 |
29460 |
+ |
(GGCC)n |
Simple_repeat |
scaffold3850 |
29930 |
30533 |
+ |
Copia-4_GM-I |
LTR/Copia |
scaffold3850 |
32237 |
35481 |
+ |
Copia-4_GM-I |
LTR/Copia |
scaffold3850 |
35891 |
35914 |
+ |
(GGCC)n |
Simple_repeat |
scaffold3850 |
36397 |
38562 |
- |
Copia22-PTR_I-int |
LTR/Copia |
scaffold3850 |
39006 |
39182 |
- |
RS2011 |
Unspecified |
scaffold3850 |
39183 |
40722 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
scaffold3850 |
41016 |
41114 |
- |
RS432 |
Unspecified |
scaffold3850 |
41763 |
41905 |
+ |
RS622 |
Unspecified |
scaffold3850 |
41906 |
41952 |
+ |
(TTTTTA)n |
Simple_repeat |
scaffold3850 |
42632 |
42774 |
+ |
RS622 |
Unspecified |
scaffold3850 |
42775 |
42821 |
+ |
(TTTTTA)n |
Simple_repeat |
scaffold3850 |
43492 |
43546 |
+ |
(T)n |
Simple_repeat |
scaffold3850 |
43625 |
43876 |
- |
RS2645 |
Unspecified |
scaffold3850 |
43879 |
44111 |
- |
RS17361 |
Unspecified |
scaffold3850 |
43920 |
44433 |
- |
RS1652 |
Unspecified |
scaffold3850 |
44526 |
44670 |
- |
RS3057 |
Unspecified |
scaffold3850 |
44840 |
44872 |
+ |
A-rich |
Low_complexity |
scaffold3850 |
45465 |
45936 |
- |
RS239 |
Unspecified |
scaffold3850 |
47471 |
47567 |
+ |
RS329 |
Unspecified |
scaffold3850 |
47555 |
47638 |
+ |
RS1746 |
Unspecified |
scaffold3850 |
47952 |
48004 |
+ |
A-rich |
Low_complexity |
scaffold3850 |
48184 |
48220 |
+ |
(TTTAACA)n |
Simple_repeat |
scaffold3850 |
48327 |
48364 |
+ |
(TTTTTTTA)n |
Simple_repeat |
scaffold3850 |
48721 |
48759 |
+ |
(A)n |
Simple_repeat |
scaffold3850 |
48823 |
48921 |
+ |
PL561 |
Unspecified |
scaffold3850 |
48963 |
49164 |
+ |
RS11030 |
Unspecified |
scaffold3850 |
49701 |
49890 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold3850 |
50117 |
51235 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold3850 |
51217 |
51618 |
+ |
RS299 |
Unspecified |
scaffold3850 |
51932 |
53547 |
+ |
Copia-71_VV-I |
LTR/Copia |
scaffold3850 |
53539 |
53740 |
+ |
RS11030 |
Unspecified |
scaffold3850 |
54829 |
55021 |
+ |
RS7512 |
Unspecified |
scaffold3850 |
55144 |
55271 |
+ |
RS14081 |
Unspecified |
scaffold3850 |
55193 |
55387 |
- |
RS13756 |
Unspecified |
scaffold3850 |
55207 |
55438 |
- |
RS3729 |
Unspecified |
scaffold3850 |
57307 |
57916 |
+ |
L1-5_STu |
LINE/L1 |
scaffold3850 |
58063 |
58189 |
+ |
L1-5_STu |
LINE/L1 |