scaffold38619 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold38619 |
1 |
45 |
+ |
(T)n |
Simple_repeat |
| scaffold38619 |
178 |
202 |
+ |
(T)n |
Simple_repeat |
| scaffold38619 |
208 |
837 |
+ |
RS2036 |
Unspecified |
| scaffold38619 |
362 |
756 |
+ |
PL906 |
Unspecified |
| scaffold38619 |
464 |
846 |
+ |
PL906 |
Unspecified |
| scaffold38619 |
1052 |
1206 |
+ |
A-rich |
Low_complexity |
| scaffold38619 |
1204 |
1299 |
+ |
RS291 |
Unspecified |
| scaffold38619 |
3168 |
3186 |
+ |
(A)n |
Simple_repeat |
| scaffold38619 |
3850 |
3890 |
+ |
A-rich |
Low_complexity |
| scaffold38619 |
4290 |
4311 |
+ |
(TAA)n |
Simple_repeat |
| scaffold38619 |
4369 |
4506 |
+ |
RS1848 |
Unspecified |
| scaffold38619 |
4504 |
5215 |
- |
PL342 |
Unspecified |
| scaffold38619 |
5208 |
5272 |
+ |
RS1848 |
Unspecified |
| scaffold38619 |
5215 |
5358 |
+ |
RS1 |
Unspecified |
| scaffold38619 |
5841 |
5873 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold38619 |
6047 |
6104 |
+ |
(ACTA)n |
Simple_repeat |
| scaffold38619 |
6158 |
7733 |
- |
Copia-96_GM-I |
LTR/Copia |
| scaffold38619 |
7942 |
7974 |
+ |
GA-rich |
Low_complexity |
| scaffold38619 |
8055 |
8992 |
- |
Copia-96_GM-I |
LTR/Copia |
| scaffold38619 |
9164 |
9296 |
- |
Copia-96_GM-I |
LTR/Copia |
| scaffold38619 |
9409 |
9453 |
- |
Copia-96_GM-I |
LTR/Copia |
| scaffold38619 |
9786 |
10628 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold38619 |
10292 |
10509 |
- |
Copia-96_GM-I |
LTR/Copia |
| scaffold38619 |
11126 |
11225 |
- |
RS1182 |
Unspecified |
| scaffold38619 |
11209 |
11411 |
- |
PL288 |
Unspecified |
| scaffold38619 |
11997 |
12268 |
+ |
PL773 |
Unspecified |
| scaffold38619 |
12388 |
12490 |
+ |
RS4475 |
Unspecified |
| scaffold38619 |
13763 |
13806 |
+ |
(T)n |
Simple_repeat |
| scaffold38619 |
13960 |
13994 |
- |
RS1900 |
Unspecified |
| scaffold38619 |
13994 |
14089 |
- |
RS2322 |
Unspecified |
| scaffold38619 |
14267 |
14892 |
- |
PL435 |
Unspecified |
| scaffold38619 |
15058 |
15628 |
+ |
PL5 |
Unspecified |
| scaffold38619 |
16073 |
16402 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold38619 |
16672 |
16788 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold38619 |
17025 |
17681 |
- |
RS1207 |
Unspecified |
| scaffold38619 |
17120 |
17798 |
- |
RS661 |
Unspecified |
| scaffold38619 |
17231 |
17804 |
- |
RS1706 |
Unspecified |
| scaffold38619 |
17300 |
17803 |
- |
RS6060 |
Unspecified |
| scaffold38619 |
17333 |
17863 |
- |
RS1930 |
Unspecified |
| scaffold38619 |
17999 |
18565 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold38619 |
18788 |
18822 |
+ |
(GATGGA)n |
Simple_repeat |
| scaffold38619 |
19088 |
20414 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold38619 |
20667 |
20760 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold38619 |
20937 |
21028 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold38619 |
22194 |
22284 |
- |
RS7417 |
Unspecified |
| scaffold38619 |
22582 |
22843 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold38619 |
22951 |
23411 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold38619 |
23469 |
23752 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold38619 |
23957 |
24240 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold38619 |
24255 |
24627 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold38619 |
25067 |
25116 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold38619 |
25306 |
26667 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold38619 |
25310 |
26628 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold38619 |
26889 |
26993 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold38619 |
27070 |
27242 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold38619 |
29927 |
29953 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold38619 |
30055 |
30102 |
+ |
(A)n |
Simple_repeat |
| scaffold38619 |
30235 |
30906 |
+ |
RS2883 |
Unspecified |
| scaffold38619 |
30329 |
31024 |
+ |
RS10831 |
Unspecified |
| scaffold38619 |
31042 |
31091 |
+ |
(TG)n |
Simple_repeat |
| scaffold38619 |
31165 |
31250 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold38619 |
31486 |
31692 |
+ |
RS4413 |
Unspecified |
| scaffold38619 |
31608 |
31768 |
+ |
RS8258 |
Unspecified |
| scaffold38619 |
31999 |
32159 |
+ |
RS4945 |
Unspecified |
| scaffold38619 |
32028 |
32184 |
+ |
RS5722 |
Unspecified |
| scaffold38619 |
32217 |
32333 |
+ |
RS8105 |
Unspecified |
| scaffold38619 |
32529 |
32564 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold38619 |
32858 |
32874 |
+ |
(A)n |
Simple_repeat |
| scaffold38619 |
33461 |
33643 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold38619 |
33803 |
34042 |
- |
RS564 |
Unspecified |
| scaffold38619 |
35106 |
35135 |
+ |
(T)n |
Simple_repeat |
| scaffold38619 |
35314 |
35551 |
+ |
RS158 |
Unspecified |
| scaffold38619 |
40761 |
41924 |
+ |
RS67 |
Unspecified |
| scaffold38619 |
41471 |
42243 |
+ |
RS1027 |
Unspecified |
| scaffold38619 |
42780 |
42812 |
+ |
(GAGGCT)n |
Simple_repeat |
| scaffold38619 |
42813 |
42860 |
+ |
(GCT)n |
Simple_repeat |
| scaffold38619 |
42861 |
43023 |
+ |
(GAGGCT)n |
Simple_repeat |
| scaffold38619 |
44116 |
44208 |
+ |
(GTGTTT)n |
Simple_repeat |
| scaffold38619 |
45208 |
45665 |
+ |
RS519 |
Unspecified |
| scaffold38619 |
47692 |
47741 |
+ |
(TTATGTA)n |
Simple_repeat |
| scaffold38619 |
49277 |
49572 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold38619 |
49587 |
50195 |
+ |
RS535 |
Unspecified |
| scaffold38619 |
49587 |
50291 |
+ |
RS1210 |
Unspecified |
| scaffold38619 |
50340 |
50974 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold38619 |
50934 |
50974 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold38619 |
51341 |
51419 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold38619 |
51575 |
51657 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold38619 |
51937 |
52420 |
- |
PL945 |
Unspecified |
| scaffold38619 |
52456 |
52479 |
+ |
(GGA)n |
Simple_repeat |
| scaffold38619 |
52662 |
53145 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold38619 |
53942 |
54091 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold38619 |
54114 |
54383 |
- |
PL755 |
Unspecified |
| scaffold38619 |
57893 |
58017 |
+ |
RS1210 |
Unspecified |
| scaffold38619 |
57944 |
58661 |
+ |
RS695 |
Unspecified |
| scaffold38619 |
58066 |
58663 |
- |
PL150 |
Unspecified |
| scaffold38619 |
58986 |
60772 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold38619 |
60715 |
61189 |
- |
PSAT19 |
LTR/Gypsy |
| scaffold38619 |
61315 |
61418 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold38619 |
64186 |
65300 |
+ |
RS398 |
Unspecified |