scaffold3887 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3887 |
711 |
1265 |
+ |
RS72 |
Unspecified |
| scaffold3887 |
1729 |
1780 |
+ |
(TTTAACCCA)n |
Simple_repeat |
| scaffold3887 |
2110 |
2181 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold3887 |
2490 |
2527 |
+ |
(AGTACTC)n |
Simple_repeat |
| scaffold3887 |
3202 |
3332 |
+ |
RS16984 |
Unspecified |
| scaffold3887 |
3698 |
3799 |
+ |
RS8276 |
Unspecified |
| scaffold3887 |
4119 |
4152 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
4549 |
4600 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold3887 |
4670 |
4820 |
- |
PL612 |
Unspecified |
| scaffold3887 |
5688 |
5916 |
- |
RS2604 |
Unspecified |
| scaffold3887 |
5863 |
6230 |
- |
RS346 |
Unspecified |
| scaffold3887 |
6773 |
8278 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold3887 |
7441 |
8217 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold3887 |
8286 |
8707 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold3887 |
9065 |
9184 |
+ |
VLINE2_VV |
LINE/L1 |
| scaffold3887 |
10027 |
10053 |
+ |
(A)n |
Simple_repeat |
| scaffold3887 |
10341 |
10763 |
+ |
PL580 |
Unspecified |
| scaffold3887 |
11616 |
11868 |
- |
RS677 |
Unspecified |
| scaffold3887 |
11956 |
11994 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold3887 |
12051 |
12097 |
+ |
(ATT)n |
Simple_repeat |
| scaffold3887 |
12181 |
12247 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold3887 |
12261 |
12314 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
12412 |
12499 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
12969 |
13027 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
13478 |
13604 |
- |
RS16315 |
Unspecified |
| scaffold3887 |
14139 |
14168 |
+ |
(T)n |
Simple_repeat |
| scaffold3887 |
14378 |
14442 |
+ |
SINE2-1_STu |
SINE/tRNA |
| scaffold3887 |
15308 |
15369 |
+ |
(GTGTAGT)n |
Simple_repeat |
| scaffold3887 |
15638 |
15736 |
- |
PL315 |
Unspecified |
| scaffold3887 |
17228 |
18038 |
- |
L1-1_GM |
LINE/L1 |
| scaffold3887 |
19391 |
19444 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
20051 |
20108 |
+ |
LINE1-12_ZM |
LINE/L1 |
| scaffold3887 |
20822 |
21091 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold3887 |
20848 |
20934 |
- |
LINE1-51_ZM |
LINE/L1 |
| scaffold3887 |
21002 |
21069 |
- |
LINE1-14_SBi |
LINE/L1 |
| scaffold3887 |
23880 |
24118 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold3887 |
25208 |
26882 |
- |
RS265 |
Unspecified |
| scaffold3887 |
27455 |
27712 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold3887 |
27807 |
28139 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold3887 |
27808 |
28138 |
- |
L1-4_EPa |
LINE/L1 |
| scaffold3887 |
28139 |
28428 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold3887 |
28483 |
29013 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold3887 |
28522 |
28937 |
- |
LINE1-26_SBi |
LINE/L1 |
| scaffold3887 |
30772 |
30816 |
+ |
(TT)n |
Simple_repeat |
| scaffold3887 |
30817 |
30865 |
+ |
(CTTTCT)n |
Simple_repeat |
| scaffold3887 |
31116 |
31159 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
32896 |
32924 |
+ |
(CT)n |
Simple_repeat |
| scaffold3887 |
33523 |
33552 |
+ |
(A)n |
Simple_repeat |
| scaffold3887 |
34402 |
34960 |
- |
RS6072 |
Unspecified |
| scaffold3887 |
34600 |
34780 |
+ |
RS2961 |
Unspecified |
| scaffold3887 |
35962 |
36319 |
- |
PL171 |
Unspecified |
| scaffold3887 |
36505 |
36532 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold3887 |
36775 |
36885 |
- |
PL539 |
Unspecified |
| scaffold3887 |
36775 |
36870 |
+ |
PL607 |
Unspecified |
| scaffold3887 |
37358 |
37392 |
+ |
(TATA)n |
Simple_repeat |
| scaffold3887 |
37531 |
37569 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
37940 |
38000 |
+ |
A-rich |
Low_complexity |
| scaffold3887 |
38128 |
38192 |
+ |
(AATATTC)n |
Simple_repeat |
| scaffold3887 |
38210 |
38276 |
+ |
(TTATCA)n |
Simple_repeat |
| scaffold3887 |
38310 |
38492 |
+ |
RS5762 |
Unspecified |
| scaffold3887 |
38824 |
38944 |
+ |
RS5848 |
Unspecified |
| scaffold3887 |
39552 |
39580 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold3887 |
41447 |
41470 |
+ |
(ATGAT)n |
Simple_repeat |
| scaffold3887 |
41984 |
42014 |
+ |
(ATAACA)n |
Simple_repeat |
| scaffold3887 |
42220 |
42412 |
+ |
EnSpm-10_STu |
DNA/CMC-EnSpm |
| scaffold3887 |
42743 |
42775 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold3887 |
43012 |
43153 |
- |
RS115 |
Unspecified |
| scaffold3887 |
43438 |
43539 |
+ |
RS8276 |
Unspecified |
| scaffold3887 |
43559 |
43856 |
- |
PL613 |
Unspecified |
| scaffold3887 |
45566 |
45590 |
+ |
(TGCA)n |
Simple_repeat |
| scaffold3887 |
46567 |
47090 |
- |
PL326 |
Unspecified |
| scaffold3887 |
47087 |
47255 |
- |
PL26 |
Unspecified |
| scaffold3887 |
49438 |
49595 |
- |
PL326 |
Unspecified |
| scaffold3887 |
50870 |
50986 |
- |
RS12967 |
Unspecified |
| scaffold3887 |
51891 |
51926 |
+ |
(CTTGAT)n |
Simple_repeat |
| scaffold3887 |
51936 |
52616 |
- |
RS715 |
Unspecified |