scaffold3948 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold3948 |
2 |
308 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold3948 |
186 |
308 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold3948 |
360 |
990 |
- |
RS2778 |
Unspecified |
| scaffold3948 |
1513 |
2046 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold3948 |
2180 |
2353 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold3948 |
2877 |
2915 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold3948 |
2982 |
3122 |
+ |
RS123 |
Unspecified |
| scaffold3948 |
3650 |
4886 |
+ |
RS123 |
Unspecified |
| scaffold3948 |
5202 |
5235 |
+ |
(A)n |
Simple_repeat |
| scaffold3948 |
5343 |
5364 |
+ |
(ACA)n |
Simple_repeat |
| scaffold3948 |
5777 |
6363 |
+ |
RS706 |
Unspecified |
| scaffold3948 |
6236 |
6678 |
+ |
RS225 |
Unspecified |
| scaffold3948 |
7221 |
7252 |
+ |
(TC)n |
Simple_repeat |
| scaffold3948 |
7413 |
7453 |
+ |
(ATTTAGT)n |
Simple_repeat |
| scaffold3948 |
8778 |
10143 |
+ |
Gypsy-5_Pru-I |
LTR/Gypsy |
| scaffold3948 |
10154 |
11698 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold3948 |
10170 |
10404 |
+ |
Gypsy-5_Pru-I |
LTR/Gypsy |
| scaffold3948 |
10744 |
11631 |
+ |
Gypsy-5_Pru-I |
LTR/Gypsy |
| scaffold3948 |
11846 |
11873 |
+ |
Copia-3_SL-I |
LTR/Copia |
| scaffold3948 |
11874 |
11940 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold3948 |
11941 |
11972 |
+ |
Copia-3_SL-I |
LTR/Copia |
| scaffold3948 |
12217 |
12323 |
+ |
PL827 |
Unspecified |
| scaffold3948 |
12267 |
12466 |
+ |
RS1717 |
Unspecified |
| scaffold3948 |
12418 |
12617 |
+ |
RS1717 |
Unspecified |
| scaffold3948 |
12572 |
12735 |
+ |
RS12640 |
Unspecified |
| scaffold3948 |
12958 |
13504 |
+ |
RS824 |
Unspecified |
| scaffold3948 |
13735 |
13863 |
+ |
PL124 |
Unspecified |
| scaffold3948 |
17661 |
17727 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold3948 |
18003 |
18713 |
+ |
RS838 |
Unspecified |
| scaffold3948 |
18544 |
21453 |
- |
RS21 |
Unspecified |
| scaffold3948 |
20996 |
21730 |
+ |
RS2700 |
Unspecified |
| scaffold3948 |
21734 |
21782 |
+ |
hAT-N1c_SB |
DNA/hAT-Ac |
| scaffold3948 |
21794 |
21879 |
+ |
(TAACGG)n |
Simple_repeat |
| scaffold3948 |
24125 |
24280 |
- |
RS254 |
Unspecified |
| scaffold3948 |
25408 |
25439 |
+ |
(TC)n |
Simple_repeat |
| scaffold3948 |
25870 |
26839 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold3948 |
26905 |
27128 |
+ |
L1-10_GM |
LINE/L1 |
| scaffold3948 |
26994 |
28274 |
+ |
RS141 |
Unspecified |
| scaffold3948 |
28204 |
28752 |
- |
RS658 |
Unspecified |
| scaffold3948 |
28785 |
28837 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold3948 |
28951 |
28990 |
+ |
A-rich |
Low_complexity |
| scaffold3948 |
28951 |
29690 |
+ |
A-rich |
Low_complexity |
| scaffold3948 |
28984 |
29690 |
- |
RS890 |
Unspecified |
| scaffold3948 |
29886 |
29959 |
+ |
(ACA)n |
Simple_repeat |
| scaffold3948 |
32069 |
32135 |
+ |
G-rich |
Low_complexity |
| scaffold3948 |
32301 |
32343 |
- |
GYPSODE1_LTR |
LTR/Gypsy |
| scaffold3948 |
32491 |
32586 |
- |
DEL_LH_I-int |
LTR/Gypsy |
| scaffold3948 |
33187 |
34758 |
- |
RS184 |
Unspecified |
| scaffold3948 |
34758 |
35027 |
- |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold3948 |
35148 |
35184 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold3948 |
36329 |
36594 |
+ |
RS2804 |
Unspecified |
| scaffold3948 |
37709 |
37761 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold3948 |
38870 |
38918 |
+ |
(GTT)n |
Simple_repeat |
| scaffold3948 |
39134 |
39234 |
+ |
(ATTTT)n |
Simple_repeat |