scaffold4042 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4042 |
1 |
531 |
+ |
RS169 |
Unspecified |
| scaffold4042 |
589 |
620 |
+ |
(ATGTTT)n |
Simple_repeat |
| scaffold4042 |
976 |
1527 |
+ |
RS2548 |
Unspecified |
| scaffold4042 |
1987 |
2310 |
+ |
RS4151 |
Unspecified |
| scaffold4042 |
2314 |
2583 |
- |
RS1 |
Unspecified |
| scaffold4042 |
2584 |
2669 |
+ |
PL425 |
Unspecified |
| scaffold4042 |
5915 |
6067 |
+ |
RS9583 |
Unspecified |
| scaffold4042 |
7056 |
7208 |
+ |
RS9583 |
Unspecified |
| scaffold4042 |
10148 |
10202 |
- |
RS4151 |
Unspecified |
| scaffold4042 |
10203 |
10257 |
+ |
RS405 |
Unspecified |
| scaffold4042 |
10209 |
10958 |
- |
RS12 |
Unspecified |
| scaffold4042 |
10955 |
11157 |
+ |
RS2330 |
Unspecified |
| scaffold4042 |
11214 |
11386 |
+ |
L1-4_VC |
LINE/L1 |
| scaffold4042 |
11372 |
12273 |
+ |
RS51 |
Unspecified |
| scaffold4042 |
12731 |
12843 |
- |
RS549 |
Unspecified |
| scaffold4042 |
12918 |
12948 |
+ |
(T)n |
Simple_repeat |
| scaffold4042 |
14724 |
16796 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold4042 |
14905 |
15795 |
- |
L1-9_Mad |
LINE/L1 |
| scaffold4042 |
17258 |
17380 |
+ |
RS12633 |
Unspecified |
| scaffold4042 |
17654 |
17712 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold4042 |
18255 |
18410 |
- |
RS2760 |
Unspecified |
| scaffold4042 |
18348 |
18451 |
+ |
RS1117 |
Unspecified |
| scaffold4042 |
18820 |
18856 |
+ |
(AATATCT)n |
Simple_repeat |
| scaffold4042 |
18845 |
18908 |
+ |
(AATATAG)n |
Simple_repeat |
| scaffold4042 |
19907 |
19927 |
+ |
(A)n |
Simple_repeat |
| scaffold4042 |
20010 |
20052 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold4042 |
20058 |
20345 |
+ |
RS756 |
Unspecified |
| scaffold4042 |
20346 |
20725 |
+ |
RS1117 |
Unspecified |
| scaffold4042 |
22643 |
22691 |
+ |
(TTATTATA)n |
Simple_repeat |
| scaffold4042 |
23233 |
23357 |
+ |
RS11990 |
Unspecified |
| scaffold4042 |
23398 |
23516 |
- |
RS1555 |
Unspecified |
| scaffold4042 |
23696 |
23823 |
+ |
RS11990 |
Unspecified |
| scaffold4042 |
23872 |
23988 |
+ |
RS12739 |
Unspecified |
| scaffold4042 |
24720 |
24744 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold4042 |
26650 |
27037 |
+ |
PL904 |
Unspecified |
| scaffold4042 |
27043 |
27079 |
+ |
(CATACAA)n |
Simple_repeat |
| scaffold4042 |
27179 |
27439 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4042 |
27708 |
27889 |
- |
RS18111 |
Unspecified |
| scaffold4042 |
28625 |
28675 |
+ |
(TTGCTA)n |
Simple_repeat |
| scaffold4042 |
29302 |
29360 |
- |
RS18111 |
Unspecified |
| scaffold4042 |
29431 |
29797 |
+ |
RS8 |
Unspecified |
| scaffold4042 |
31746 |
31942 |
- |
RS13795 |
Unspecified |
| scaffold4042 |
32704 |
32820 |
+ |
RS972 |
Unspecified |
| scaffold4042 |
32826 |
32933 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold4042 |
33128 |
33147 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4042 |
34133 |
34163 |
+ |
(AATT)n |
Simple_repeat |
| scaffold4042 |
36155 |
36239 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4042 |
36303 |
36348 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4042 |
36505 |
36525 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4042 |
38347 |
38465 |
+ |
RS14305 |
Unspecified |
| scaffold4042 |
38608 |
38636 |
+ |
(T)n |
Simple_repeat |
| scaffold4042 |
38764 |
38865 |
- |
RS11483 |
Unspecified |
| scaffold4042 |
39017 |
39217 |
- |
RS1155 |
Unspecified |
| scaffold4042 |
39173 |
39317 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4042 |
39249 |
39317 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4042 |
39540 |
39684 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4042 |
39540 |
39608 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4042 |
39592 |
39684 |
- |
RS1259 |
Unspecified |
| scaffold4042 |
39638 |
39690 |
+ |
RS997 |
Unspecified |
| scaffold4042 |
39685 |
39779 |
+ |
RS16382 |
Unspecified |
| scaffold4042 |
39775 |
39955 |
+ |
RS1155 |
Unspecified |
| scaffold4042 |
39873 |
40070 |
+ |
RS6306 |
Unspecified |
| scaffold4042 |
39986 |
40086 |
- |
RS8136 |
Unspecified |
| scaffold4042 |
40104 |
40149 |
+ |
(T)n |
Simple_repeat |
| scaffold4042 |
40155 |
40253 |
+ |
RS11483 |
Unspecified |
| scaffold4042 |
40406 |
40487 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold4042 |
40735 |
42418 |
+ |
PL124 |
Unspecified |
| scaffold4042 |
43521 |
43595 |
- |
ATHATN4 |
DNA/hAT-Ac |
| scaffold4042 |
43958 |
45121 |
- |
L1-1_GM |
LINE/L1 |
| scaffold4042 |
45305 |
45365 |
- |
L1-5_GM |
LINE/L1 |
| scaffold4042 |
47313 |
47347 |
+ |
(GATCCA)n |
Simple_repeat |
| scaffold4042 |
48738 |
50013 |
+ |
RS658 |
Unspecified |
| scaffold4042 |
50533 |
50654 |
+ |
RS223 |
Unspecified |
| scaffold4042 |
50721 |
50987 |
+ |
RS1436 |
Unspecified |
| scaffold4042 |
50721 |
50917 |
+ |
RS3550 |
Unspecified |
| scaffold4042 |
50974 |
51100 |
- |
RS1362 |
Unspecified |
| scaffold4042 |
51319 |
51694 |
+ |
RS614 |
Unspecified |
| scaffold4042 |
52037 |
52119 |
+ |
(ATAAGAT)n |
Simple_repeat |
| scaffold4042 |
54148 |
54164 |
+ |
(T)n |
Simple_repeat |
| scaffold4042 |
54196 |
54251 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold4042 |
54300 |
54544 |
- |
PL469 |
Unspecified |
| scaffold4042 |
56017 |
56050 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4042 |
56061 |
56231 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold4042 |
56395 |
56418 |
+ |
(TA)n |
Simple_repeat |
| scaffold4042 |
57121 |
57139 |
+ |
(A)n |
Simple_repeat |
| scaffold4042 |
57850 |
57952 |
+ |
RS750 |
Unspecified |
| scaffold4042 |
58673 |
58764 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold4042 |
59618 |
59666 |
+ |
A-rich |
Low_complexity |
| scaffold4042 |
60790 |
60826 |
+ |
(TT)n |
Simple_repeat |
| scaffold4042 |
60896 |
60937 |
+ |
(TCAATT)n |
Simple_repeat |
| scaffold4042 |
60896 |
61122 |
+ |
(TCAATT)n |
Simple_repeat |
| scaffold4042 |
60918 |
61122 |
+ |
RS5660 |
Unspecified |
| scaffold4042 |
61132 |
61141 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold4042 |
61142 |
61186 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4042 |
61317 |
61401 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold4042 |
61468 |
61502 |
+ |
(A)n |
Simple_repeat |
| scaffold4042 |
62037 |
62132 |
+ |
RS18358 |
Unspecified |
| scaffold4042 |
62772 |
62816 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold4042 |
63998 |
64014 |
+ |
(T)n |
Simple_repeat |
| scaffold4042 |
64179 |
64202 |
+ |
(T)n |
Simple_repeat |
| scaffold4042 |
64938 |
64955 |
+ |
(T)n |
Simple_repeat |
| scaffold4042 |
64986 |
65036 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold4042 |
65140 |
65197 |
+ |
(TA)n |
Simple_repeat |
| scaffold4042 |
65195 |
65475 |
+ |
RS7960 |
Unspecified |