scaffold40465 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold40465 |
1 |
607 |
- |
PL14 |
Unspecified |
| scaffold40465 |
54 |
81 |
+ |
Gypsy-127_SBi-I |
LTR/Gypsy |
| scaffold40465 |
584 |
945 |
+ |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold40465 |
1053 |
1117 |
+ |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold40465 |
1782 |
2035 |
+ |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold40465 |
2189 |
2221 |
+ |
(GAA)n |
Simple_repeat |
| scaffold40465 |
2749 |
2971 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold40465 |
2982 |
3097 |
+ |
(TAG)n |
Simple_repeat |
| scaffold40465 |
3098 |
3165 |
+ |
(TTGTTA)n |
Simple_repeat |
| scaffold40465 |
3311 |
3424 |
+ |
ENSPM2_VV |
DNA/CMC-EnSpm |
| scaffold40465 |
3510 |
3672 |
- |
RS3878 |
Unspecified |
| scaffold40465 |
3683 |
3716 |
+ |
(T)n |
Simple_repeat |
| scaffold40465 |
3738 |
3916 |
- |
RS1795 |
Unspecified |
| scaffold40465 |
3924 |
3970 |
+ |
(ATC)n |
Simple_repeat |
| scaffold40465 |
4017 |
4770 |
- |
RS1795 |
Unspecified |
| scaffold40465 |
4969 |
5150 |
+ |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold40465 |
5172 |
5665 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold40465 |
5961 |
6232 |
- |
RS1 |
Unspecified |
| scaffold40465 |
7966 |
8084 |
- |
RS26 |
Unspecified |
| scaffold40465 |
8575 |
8607 |
+ |
(TTTTTATT)n |
Simple_repeat |
| scaffold40465 |
8654 |
8749 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold40465 |
9546 |
9809 |
- |
PL882 |
Unspecified |
| scaffold40465 |
9832 |
9885 |
+ |
A-rich |
Low_complexity |
| scaffold40465 |
10025 |
10086 |
+ |
(CCA)n |
Simple_repeat |
| scaffold40465 |
10482 |
10507 |
+ |
(T)n |
Simple_repeat |
| scaffold40465 |
10557 |
10758 |
+ |
RS3635 |
Unspecified |
| scaffold40465 |
11585 |
11627 |
+ |
(TA)n |
Simple_repeat |
| scaffold40465 |
11628 |
11652 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold40465 |
11665 |
11688 |
+ |
(A)n |
Simple_repeat |
| scaffold40465 |
11712 |
11950 |
+ |
RS16888 |
Unspecified |
| scaffold40465 |
12401 |
12465 |
+ |
A-rich |
Low_complexity |
| scaffold40465 |
12619 |
12658 |
+ |
(GATTTG)n |
Simple_repeat |
| scaffold40465 |
12807 |
12843 |
+ |
ENSPM_AC |
DNA/CMC-EnSpm |
| scaffold40465 |
13019 |
13340 |
+ |
RS3221 |
Unspecified |
| scaffold40465 |
13497 |
13533 |
+ |
(A)n |
Simple_repeat |
| scaffold40465 |
13669 |
13863 |
+ |
PL774 |
Unspecified |
| scaffold40465 |
13868 |
14350 |
- |
PL6 |
Unspecified |
| scaffold40465 |
14345 |
14524 |
+ |
PL774 |
Unspecified |
| scaffold40465 |
15146 |
15214 |
+ |
(TG)n |
Simple_repeat |
| scaffold40465 |
15222 |
15361 |
- |
RS2535 |
Unspecified |
| scaffold40465 |
15502 |
15602 |
+ |
RS51 |
Unspecified |
| scaffold40465 |
16704 |
16763 |
+ |
(ATCATT)n |
Simple_repeat |
| scaffold40465 |
18797 |
18839 |
+ |
(TATT)n |
Simple_repeat |
| scaffold40465 |
19046 |
19161 |
- |
RS3332 |
Unspecified |
| scaffold40465 |
19140 |
19186 |
+ |
PL344 |
Unspecified |
| scaffold40465 |
19140 |
19192 |
+ |
RS3286 |
Unspecified |
| scaffold40465 |
19594 |
19753 |
+ |
RS189 |
Unspecified |
| scaffold40465 |
20481 |
20624 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold40465 |
20629 |
20701 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold40465 |
21150 |
21220 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold40465 |
21301 |
21747 |
- |
PL963 |
Unspecified |
| scaffold40465 |
21793 |
21856 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold40465 |
22459 |
22501 |
+ |
(TTTATAT)n |
Simple_repeat |
| scaffold40465 |
22489 |
22590 |
+ |
A-rich |
Low_complexity |
| scaffold40465 |
23032 |
23077 |
+ |
A-rich |
Low_complexity |
| scaffold40465 |
24855 |
24890 |
+ |
A-rich |
Low_complexity |
| scaffold40465 |
24937 |
24998 |
- |
RS488 |
Unspecified |
| scaffold40465 |
24998 |
25268 |
- |
RS9613 |
Unspecified |
| scaffold40465 |
25317 |
25583 |
- |
RS11292 |
Unspecified |
| scaffold40465 |
25731 |
25920 |
+ |
RS15040 |
Unspecified |
| scaffold40465 |
26223 |
26263 |
+ |
(ACA)n |
Simple_repeat |