scaffold40491 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold40491 |
2 |
1278 |
+ |
RS254 |
Unspecified |
| scaffold40491 |
99 |
745 |
+ |
RS661 |
Unspecified |
| scaffold40491 |
3686 |
3718 |
+ |
(T)n |
Simple_repeat |
| scaffold40491 |
3776 |
3818 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold40491 |
4056 |
4096 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold40491 |
4853 |
5336 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold40491 |
5526 |
6067 |
- |
RS3329 |
Unspecified |
| scaffold40491 |
6308 |
6499 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold40491 |
6721 |
6794 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold40491 |
8086 |
8118 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold40491 |
8573 |
9189 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
9126 |
9189 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
9206 |
9455 |
+ |
RS1963 |
Unspecified |
| scaffold40491 |
9263 |
9867 |
+ |
RS69 |
Unspecified |
| scaffold40491 |
9964 |
9989 |
+ |
(TAA)n |
Simple_repeat |
| scaffold40491 |
10455 |
10513 |
+ |
(AATA)n |
Simple_repeat |
| scaffold40491 |
10564 |
10609 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold40491 |
10624 |
10679 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
12344 |
13198 |
+ |
RS245 |
Unspecified |
| scaffold40491 |
13364 |
13396 |
+ |
(A)n |
Simple_repeat |
| scaffold40491 |
13408 |
13447 |
+ |
(T)n |
Simple_repeat |
| scaffold40491 |
13780 |
14332 |
+ |
PL69 |
Unspecified |
| scaffold40491 |
14467 |
14495 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold40491 |
14587 |
14624 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
15627 |
15698 |
- |
HAT-N16_Mad |
DNA/hAT-Tip100 |
| scaffold40491 |
16092 |
16186 |
- |
PL506 |
Unspecified |
| scaffold40491 |
16185 |
16465 |
- |
RS776 |
Unspecified |
| scaffold40491 |
16943 |
17446 |
- |
PL481 |
Unspecified |
| scaffold40491 |
17638 |
17663 |
+ |
(A)n |
Simple_repeat |
| scaffold40491 |
17957 |
18194 |
- |
RS10268 |
Unspecified |
| scaffold40491 |
18281 |
18321 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
18410 |
18430 |
+ |
(A)n |
Simple_repeat |
| scaffold40491 |
25064 |
25090 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
26123 |
26278 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold40491 |
26288 |
26319 |
+ |
(GATTG)n |
Simple_repeat |
| scaffold40491 |
26634 |
26713 |
- |
MuDR-18_VV |
DNA/MULE-MuDR |
| scaffold40491 |
28770 |
28805 |
+ |
(ACTTC)n |
Simple_repeat |
| scaffold40491 |
28897 |
29452 |
- |
PL301 |
Unspecified |
| scaffold40491 |
30839 |
30882 |
+ |
(A)n |
Simple_repeat |
| scaffold40491 |
31025 |
31076 |
+ |
(A)n |
Simple_repeat |
| scaffold40491 |
31880 |
31970 |
+ |
(ATACA)n |
Simple_repeat |
| scaffold40491 |
32363 |
32392 |
+ |
(T)n |
Simple_repeat |
| scaffold40491 |
32743 |
32912 |
- |
TWIF |
DNA/hAT-Ac |
| scaffold40491 |
33303 |
33336 |
+ |
(GCCGT)n |
Simple_repeat |
| scaffold40491 |
33391 |
33416 |
+ |
(CGTGC)n |
Simple_repeat |
| scaffold40491 |
35255 |
35330 |
- |
Gypsy-9_Mad-I |
LTR/Gypsy |
| scaffold40491 |
36734 |
36787 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
37029 |
37066 |
+ |
(CAT)n |
Simple_repeat |
| scaffold40491 |
37245 |
37915 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold40491 |
38533 |
38565 |
+ |
(TTG)n |
Simple_repeat |
| scaffold40491 |
39034 |
39513 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold40491 |
39833 |
39859 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold40491 |
41961 |
42048 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold40491 |
42813 |
42851 |
+ |
(TCATAAG)n |
Simple_repeat |
| scaffold40491 |
42976 |
43330 |
+ |
RS4448 |
Unspecified |
| scaffold40491 |
43917 |
43997 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
45352 |
45397 |
+ |
(CAA)n |
Simple_repeat |
| scaffold40491 |
45709 |
46221 |
+ |
RS449 |
Unspecified |
| scaffold40491 |
46191 |
47640 |
- |
Gypsy-26_ST-I |
LTR/Gypsy |
| scaffold40491 |
47824 |
48601 |
- |
RIRE8A_I-int |
LTR/Gypsy |
| scaffold40491 |
49710 |
49949 |
+ |
RS3091 |
Unspecified |
| scaffold40491 |
49943 |
50266 |
- |
RS1988 |
Unspecified |
| scaffold40491 |
50377 |
50445 |
+ |
(TAA)n |
Simple_repeat |
| scaffold40491 |
50909 |
51296 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold40491 |
51484 |
51916 |
+ |
RS5945 |
Unspecified |
| scaffold40491 |
52107 |
52161 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold40491 |
53109 |
53569 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold40491 |
54795 |
54858 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold40491 |
55430 |
55916 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold40491 |
55916 |
56332 |
+ |
PL111 |
Unspecified |
| scaffold40491 |
56331 |
56838 |
- |
PL255 |
Unspecified |
| scaffold40491 |
57297 |
57356 |
+ |
(TAA)n |
Simple_repeat |
| scaffold40491 |
58288 |
58343 |
+ |
(TTCTAA)n |
Simple_repeat |
| scaffold40491 |
58345 |
58395 |
+ |
(AT)n |
Simple_repeat |
| scaffold40491 |
58431 |
58459 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold40491 |
58842 |
58911 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold40491 |
58993 |
59029 |
+ |
(ATTCTC)n |
Simple_repeat |
| scaffold40491 |
59224 |
59700 |
+ |
PL188 |
Unspecified |
| scaffold40491 |
60923 |
61034 |
+ |
RS756 |
Unspecified |
| scaffold40491 |
62810 |
62846 |
+ |
A-rich |
Low_complexity |
| scaffold40491 |
63035 |
63356 |
- |
RS78 |
Unspecified |
| scaffold40491 |
63772 |
63992 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold40491 |
64958 |
65116 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold40491 |
65473 |
65504 |
+ |
A-rich |
Low_complexity |