scaffold4184 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold4184 |
11 |
516 |
+ |
RIRE1_I-int |
LTR/Copia |
scaffold4184 |
3885 |
4445 |
+ |
RS4060 |
Unspecified |
scaffold4184 |
5077 |
5102 |
+ |
(TCC)n |
Simple_repeat |
scaffold4184 |
6067 |
6257 |
- |
RS676 |
Unspecified |
scaffold4184 |
6255 |
6498 |
- |
RS581 |
Unspecified |
scaffold4184 |
6497 |
6897 |
+ |
RS541 |
Unspecified |
scaffold4184 |
7209 |
7246 |
+ |
(GCCG)n |
Simple_repeat |
scaffold4184 |
7411 |
8198 |
+ |
RS695 |
Unspecified |
scaffold4184 |
9226 |
9501 |
- |
RS1941 |
Unspecified |
scaffold4184 |
9731 |
9765 |
+ |
(TGCTAG)n |
Simple_repeat |
scaffold4184 |
10381 |
10683 |
- |
RS225 |
Unspecified |
scaffold4184 |
10543 |
11104 |
- |
RS706 |
Unspecified |
scaffold4184 |
10598 |
11174 |
- |
RS225 |
Unspecified |
scaffold4184 |
10869 |
11857 |
+ |
RS166 |
Unspecified |
scaffold4184 |
11851 |
11888 |
+ |
RS903 |
Unspecified |
scaffold4184 |
11984 |
12590 |
+ |
RS1381 |
Unspecified |
scaffold4184 |
12278 |
13742 |
+ |
RS838 |
Unspecified |
scaffold4184 |
13182 |
13839 |
- |
RS21 |
Unspecified |
scaffold4184 |
13843 |
14096 |
+ |
RS670 |
Unspecified |
scaffold4184 |
14240 |
14259 |
+ |
(C)n |
Simple_repeat |
scaffold4184 |
14240 |
14825 |
+ |
(C)n |
Simple_repeat |
scaffold4184 |
14255 |
14825 |
- |
RS706 |
Unspecified |
scaffold4184 |
14588 |
15423 |
+ |
RS166 |
Unspecified |
scaffold4184 |
15420 |
15703 |
- |
LTR-1_SBi-LTR |
LTR |
scaffold4184 |
15761 |
16009 |
+ |
RS435 |
Unspecified |
scaffold4184 |
15761 |
15943 |
+ |
RS166 |
Unspecified |
scaffold4184 |
15962 |
16262 |
+ |
RS437 |
Unspecified |
scaffold4184 |
16026 |
16282 |
+ |
RS903 |
Unspecified |
scaffold4184 |
16102 |
16669 |
+ |
RS1381 |
Unspecified |
scaffold4184 |
17321 |
17376 |
+ |
(ACTTTTG)n |
Simple_repeat |
scaffold4184 |
17805 |
18562 |
- |
RS730 |
Unspecified |
scaffold4184 |
18173 |
19086 |
+ |
RS1123 |
Unspecified |
scaffold4184 |
19351 |
19534 |
+ |
RS984 |
Unspecified |
scaffold4184 |
19688 |
19763 |
+ |
PL956 |
Unspecified |
scaffold4184 |
20078 |
20119 |
+ |
(ATGTTAG)n |
Simple_repeat |
scaffold4184 |
20179 |
22244 |
+ |
RS934 |
Unspecified |
scaffold4184 |
22244 |
22328 |
+ |
RS1123 |
Unspecified |
scaffold4184 |
22759 |
22780 |
+ |
(A)n |
Simple_repeat |
scaffold4184 |
24076 |
24461 |
+ |
Gypsy10-PTR_I-int |
LTR/Gypsy |
scaffold4184 |
24637 |
27191 |
+ |
Gypsy-33_VV-I |
LTR/Gypsy |
scaffold4184 |
26721 |
27848 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
scaffold4184 |
28904 |
29538 |
+ |
RS984 |
Unspecified |
scaffold4184 |
29871 |
29910 |
+ |
RS265 |
Unspecified |
scaffold4184 |
29940 |
30705 |
+ |
RS265 |
Unspecified |
scaffold4184 |
30681 |
31301 |
+ |
RS265 |
Unspecified |
scaffold4184 |
32790 |
32812 |
+ |
(T)n |
Simple_repeat |
scaffold4184 |
32927 |
33272 |
+ |
RS42 |
Unspecified |
scaffold4184 |
33350 |
33418 |
+ |
(ATGTAAT)n |
Simple_repeat |
scaffold4184 |
33676 |
33944 |
+ |
RS1766 |
Unspecified |
scaffold4184 |
33781 |
34096 |
+ |
RS2524 |
Unspecified |
scaffold4184 |
37655 |
37678 |
+ |
(A)n |
Simple_repeat |
scaffold4184 |
37776 |
37834 |
+ |
A-rich |
Low_complexity |
scaffold4184 |
38234 |
38865 |
+ |
RS7326 |
Unspecified |
scaffold4184 |
40370 |
40407 |
+ |
(CTT)n |
Simple_repeat |
scaffold4184 |
40591 |
40803 |
+ |
RS2327 |
Unspecified |
scaffold4184 |
40865 |
41121 |
+ |
RS14530 |
Unspecified |
scaffold4184 |
41848 |
41871 |
+ |
(A)n |
Simple_repeat |
scaffold4184 |
42646 |
42786 |
+ |
(ACA)n |
Simple_repeat |
scaffold4184 |
43248 |
43432 |
+ |
RS10367 |
Unspecified |
scaffold4184 |
43911 |
43935 |
+ |
(GA)n |
Simple_repeat |
scaffold4184 |
44009 |
44117 |
- |
PL425 |
Unspecified |
scaffold4184 |
44034 |
44340 |
- |
RS4151 |
Unspecified |
scaffold4184 |
44552 |
44580 |
+ |
G-rich |
Low_complexity |
scaffold4184 |
45720 |
45804 |
+ |
(ATTTCAA)n |
Simple_repeat |
scaffold4184 |
45825 |
45862 |
+ |
A-rich |
Low_complexity |
scaffold4184 |
50534 |
51151 |
+ |
RS599 |
Unspecified |
scaffold4184 |
51702 |
51752 |
+ |
(TTTTCTT)n |
Simple_repeat |
scaffold4184 |
55422 |
55654 |
- |
RS18 |
Unspecified |
scaffold4184 |
55886 |
55944 |
+ |
A-rich |
Low_complexity |
scaffold4184 |
56137 |
56214 |
+ |
(TTTTTA)n |
Simple_repeat |
scaffold4184 |
56576 |
56749 |
+ |
(TC)n |
Simple_repeat |
scaffold4184 |
56683 |
56749 |
+ |
(TC)n |
Simple_repeat |
scaffold4184 |
56772 |
56814 |
+ |
(TTCTT)n |
Simple_repeat |
scaffold4184 |
57931 |
57997 |
+ |
(AATT)n |
Simple_repeat |
scaffold4184 |
58191 |
58815 |
+ |
LINE1-60_SBi |
LINE/L1 |
scaffold4184 |
58998 |
59339 |
+ |
LINE1-24_SBi |
LINE/L1 |
scaffold4184 |
59916 |
60089 |
+ |
RS5330 |
Unspecified |
scaffold4184 |
60172 |
60713 |
+ |
RS6244 |
Unspecified |
scaffold4184 |
61111 |
61137 |
+ |
(TAAAT)n |
Simple_repeat |
scaffold4184 |
61781 |
61807 |
+ |
(AAGAA)n |
Simple_repeat |
scaffold4184 |
61949 |
61985 |
+ |
(AGT)n |
Simple_repeat |
scaffold4184 |
62488 |
62972 |
+ |
PL582 |
Unspecified |
scaffold4184 |
62951 |
63216 |
- |
RS570 |
Unspecified |
scaffold4184 |
64134 |
64607 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
scaffold4184 |
65320 |
65346 |
+ |
(T)n |
Simple_repeat |
scaffold4184 |
65488 |
67013 |
- |
Gypsy-70-I_ZM |
LTR/Gypsy |
scaffold4184 |
65584 |
67013 |
- |
Gypsy-70-I_ZM |
LTR/Gypsy |
scaffold4184 |
67143 |
67769 |
- |
Gypsy-70-I_ZM |
LTR/Gypsy |
scaffold4184 |
67929 |
67954 |
+ |
(TA)n |
Simple_repeat |
scaffold4184 |
68073 |
68165 |
+ |
(A)n |
Simple_repeat |
scaffold4184 |
71079 |
71864 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
scaffold4184 |
72406 |
72615 |
+ |
RS752 |
Unspecified |
scaffold4184 |
72994 |
73056 |
+ |
A-rich |
Low_complexity |
scaffold4184 |
73479 |
73508 |
+ |
(T)n |
Simple_repeat |
scaffold4184 |
78351 |
78533 |
+ |
RS9239 |
Unspecified |
scaffold4184 |
79640 |
79749 |
- |
RS12199 |
Unspecified |
scaffold4184 |
79776 |
80037 |
+ |
RS12199 |
Unspecified |
scaffold4184 |
79839 |
80100 |
+ |
RS12199 |
Unspecified |
scaffold4184 |
79923 |
80178 |
+ |
RS12199 |
Unspecified |
scaffold4184 |
79965 |
80184 |
+ |
RS12199 |
Unspecified |
scaffold4184 |
80061 |
80527 |
- |
RS1299 |
Unspecified |
scaffold4184 |
80575 |
80794 |
- |
RS2560 |
Unspecified |
scaffold4184 |
81299 |
81362 |
+ |
(ACAGCA)n |
Simple_repeat |
scaffold4184 |
83818 |
84034 |
+ |
RS9922 |
Unspecified |
scaffold4184 |
84112 |
84493 |
+ |
(TA)n |
Simple_repeat |
scaffold4184 |
84958 |
85145 |
+ |
PL87 |
Unspecified |
scaffold4184 |
85543 |
85587 |
+ |
(TTATT)n |
Simple_repeat |
scaffold4184 |
86687 |
87431 |
- |
GYCUME1_I-int |
LTR/Gypsy |
scaffold4184 |
87571 |
87720 |
- |
Gypsy-25_BD-I |
LTR/Gypsy |
scaffold4184 |
87802 |
87962 |
- |
Gypsy-25_BD-I |
LTR/Gypsy |
scaffold4184 |
89066 |
89634 |
- |
RS645 |
Unspecified |
scaffold4184 |
91557 |
91593 |
+ |
(TGCTTG)n |
Simple_repeat |
scaffold4184 |
92281 |
92485 |
+ |
RS672 |
Unspecified |
scaffold4184 |
92482 |
92581 |
+ |
RS150 |
Unspecified |
scaffold4184 |
92575 |
93160 |
+ |
RS672 |
Unspecified |
scaffold4184 |
94657 |
94821 |
+ |
RS934 |
Unspecified |
scaffold4184 |
94872 |
95113 |
+ |
PL127 |
Unspecified |
scaffold4184 |
96621 |
96657 |
+ |
(TGCTTG)n |
Simple_repeat |
scaffold4184 |
97315 |
97746 |
- |
RS225 |
Unspecified |
scaffold4184 |
97464 |
98085 |
- |
RS706 |
Unspecified |
scaffold4184 |
98093 |
99068 |
+ |
RS166 |
Unspecified |
scaffold4184 |
99072 |
99365 |
+ |
RS437 |
Unspecified |