scaffold4860 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold4860 |
6 |
86 |
- |
ATENSPM1A |
DNA/CMC-EnSpm |
| scaffold4860 |
183 |
261 |
- |
ATENSPM1 |
DNA/CMC-EnSpm |
| scaffold4860 |
262 |
357 |
+ |
ATENSPM1A |
DNA/CMC-EnSpm |
| scaffold4860 |
761 |
824 |
+ |
(TATATAT)n |
Simple_repeat |
| scaffold4860 |
761 |
863 |
+ |
(TATATAT)n |
Simple_repeat |
| scaffold4860 |
808 |
863 |
- |
RS212 |
Unspecified |
| scaffold4860 |
856 |
1084 |
+ |
RS884 |
Unspecified |
| scaffold4860 |
1074 |
1463 |
+ |
RS283 |
Unspecified |
| scaffold4860 |
2228 |
2320 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
2332 |
2518 |
- |
RS1512 |
Unspecified |
| scaffold4860 |
2523 |
2574 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4860 |
2678 |
2695 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
2696 |
2724 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
2725 |
2747 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
2823 |
2872 |
- |
PL599 |
Unspecified |
| scaffold4860 |
2872 |
3036 |
- |
PL599 |
Unspecified |
| scaffold4860 |
3035 |
3428 |
- |
PL599 |
Unspecified |
| scaffold4860 |
3424 |
3631 |
- |
RS263 |
Unspecified |
| scaffold4860 |
3627 |
4163 |
- |
RS263 |
Unspecified |
| scaffold4860 |
4929 |
5000 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
4971 |
5012 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4860 |
6081 |
6180 |
+ |
RS250 |
Unspecified |
| scaffold4860 |
6418 |
6481 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold4860 |
6529 |
6567 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
7884 |
7943 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
10731 |
10754 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
12513 |
12543 |
+ |
(ATC)n |
Simple_repeat |
| scaffold4860 |
12692 |
12739 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold4860 |
12778 |
12838 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
13532 |
13558 |
+ |
G-rich |
Low_complexity |
| scaffold4860 |
16979 |
17181 |
+ |
RS13821 |
Unspecified |
| scaffold4860 |
19273 |
19536 |
- |
RS356 |
Unspecified |
| scaffold4860 |
19903 |
20032 |
- |
RS3398 |
Unspecified |
| scaffold4860 |
21088 |
21141 |
+ |
(TATAATT)n |
Simple_repeat |
| scaffold4860 |
21733 |
21766 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4860 |
22682 |
22715 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4860 |
23085 |
23146 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4860 |
23523 |
23574 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
24407 |
24460 |
+ |
(AACTC)n |
Simple_repeat |
| scaffold4860 |
27015 |
27264 |
- |
RS3169 |
Unspecified |
| scaffold4860 |
32589 |
32616 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4860 |
33008 |
33092 |
+ |
(TTT)n |
Simple_repeat |
| scaffold4860 |
33199 |
33288 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold4860 |
34051 |
34199 |
+ |
RS38 |
Unspecified |
| scaffold4860 |
34144 |
34221 |
+ |
RS13501 |
Unspecified |
| scaffold4860 |
34656 |
34694 |
+ |
(GTACTAC)n |
Simple_repeat |
| scaffold4860 |
35585 |
35629 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold4860 |
37013 |
37182 |
- |
PL699 |
Unspecified |
| scaffold4860 |
37484 |
37527 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold4860 |
37862 |
37891 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
38431 |
38472 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4860 |
38740 |
38806 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold4860 |
39614 |
39672 |
+ |
(AATA)n |
Simple_repeat |
| scaffold4860 |
42224 |
42344 |
+ |
RS12254 |
Unspecified |
| scaffold4860 |
42338 |
42418 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold4860 |
42674 |
42701 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
43605 |
43648 |
+ |
(TTTTTTC)n |
Simple_repeat |
| scaffold4860 |
43648 |
43741 |
+ |
RS4475 |
Unspecified |
| scaffold4860 |
43858 |
43902 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold4860 |
44300 |
44326 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
44775 |
44815 |
+ |
(TTTGTAA)n |
Simple_repeat |
| scaffold4860 |
44965 |
45030 |
+ |
(ATAATTA)n |
Simple_repeat |
| scaffold4860 |
46139 |
46168 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
46364 |
46384 |
+ |
(TTG)n |
Simple_repeat |
| scaffold4860 |
46628 |
46700 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
46845 |
46877 |
+ |
(TTCTA)n |
Simple_repeat |
| scaffold4860 |
47970 |
48231 |
- |
RS11316 |
Unspecified |
| scaffold4860 |
48051 |
48143 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
48624 |
48665 |
+ |
(TAA)n |
Simple_repeat |
| scaffold4860 |
48666 |
48673 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold4860 |
48815 |
48997 |
- |
RS3596 |
Unspecified |
| scaffold4860 |
50519 |
50541 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
52083 |
52129 |
+ |
(CTTTTA)n |
Simple_repeat |
| scaffold4860 |
53691 |
53775 |
+ |
Athila8B_I-int |
LTR/Gypsy |
| scaffold4860 |
53944 |
54210 |
- |
RS10 |
Unspecified |
| scaffold4860 |
54436 |
54484 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
54587 |
54621 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
54622 |
54665 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold4860 |
55179 |
55226 |
+ |
RS18371 |
Unspecified |
| scaffold4860 |
55285 |
55329 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
55672 |
55688 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
58470 |
58658 |
- |
RS12287 |
Unspecified |
| scaffold4860 |
62433 |
62498 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
62530 |
62649 |
- |
RS17518 |
Unspecified |
| scaffold4860 |
63746 |
63785 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
64121 |
64158 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold4860 |
64455 |
64483 |
+ |
(GGT)n |
Simple_repeat |
| scaffold4860 |
65821 |
66052 |
- |
RS17062 |
Unspecified |
| scaffold4860 |
66070 |
66180 |
- |
RS17509 |
Unspecified |
| scaffold4860 |
67169 |
67291 |
+ |
RS15423 |
Unspecified |
| scaffold4860 |
67298 |
67414 |
- |
RS15686 |
Unspecified |
| scaffold4860 |
67426 |
67483 |
- |
RS15686 |
Unspecified |
| scaffold4860 |
70202 |
70380 |
- |
RS11186 |
Unspecified |
| scaffold4860 |
70331 |
70499 |
- |
RS11523 |
Unspecified |
| scaffold4860 |
70613 |
70737 |
- |
RS14624 |
Unspecified |
| scaffold4860 |
70733 |
70814 |
- |
RS1 |
Unspecified |
| scaffold4860 |
70733 |
70827 |
+ |
RS2994 |
Unspecified |
| scaffold4860 |
70884 |
70956 |
+ |
RS2994 |
Unspecified |
| scaffold4860 |
70903 |
71120 |
- |
RS1 |
Unspecified |
| scaffold4860 |
70936 |
71121 |
- |
RS1848 |
Unspecified |
| scaffold4860 |
71090 |
71126 |
+ |
RS1 |
Unspecified |
| scaffold4860 |
71121 |
71260 |
- |
RS511 |
Unspecified |
| scaffold4860 |
71269 |
71497 |
+ |
RS18 |
Unspecified |
| scaffold4860 |
71683 |
71734 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
71850 |
72049 |
- |
RS11557 |
Unspecified |
| scaffold4860 |
72096 |
72273 |
- |
RS11469 |
Unspecified |
| scaffold4860 |
76353 |
76378 |
+ |
(CGACC)n |
Simple_repeat |
| scaffold4860 |
77198 |
77378 |
- |
RS5 |
Unspecified |
| scaffold4860 |
78227 |
78243 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
78924 |
79023 |
- |
RS8095 |
Unspecified |
| scaffold4860 |
82089 |
82113 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
83981 |
84011 |
+ |
(AAAACAA)n |
Simple_repeat |
| scaffold4860 |
84142 |
84166 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
84391 |
84514 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
84808 |
84839 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
85572 |
85592 |
+ |
(AG)n |
Simple_repeat |
| scaffold4860 |
86521 |
86584 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
86745 |
86787 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
87015 |
87062 |
+ |
(CGG)n |
Simple_repeat |
| scaffold4860 |
87041 |
87082 |
+ |
(GCGGAG)n |
Simple_repeat |
| scaffold4860 |
87486 |
87549 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
87710 |
87752 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
87980 |
88027 |
+ |
(CGG)n |
Simple_repeat |
| scaffold4860 |
88006 |
88047 |
+ |
(GCGGAG)n |
Simple_repeat |
| scaffold4860 |
88169 |
88200 |
+ |
(GAT)n |
Simple_repeat |
| scaffold4860 |
88234 |
88301 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4860 |
88408 |
88440 |
+ |
(GGT)n |
Simple_repeat |
| scaffold4860 |
88506 |
88545 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
88807 |
88893 |
- |
RS3665 |
Unspecified |
| scaffold4860 |
88879 |
88957 |
- |
RS13929 |
Unspecified |
| scaffold4860 |
89392 |
89749 |
- |
RS8 |
Unspecified |
| scaffold4860 |
89934 |
89950 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
91032 |
91087 |
+ |
PL560 |
Unspecified |
| scaffold4860 |
91039 |
91087 |
+ |
RS915 |
Unspecified |
| scaffold4860 |
91140 |
91231 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
92289 |
92495 |
+ |
RS14642 |
Unspecified |
| scaffold4860 |
92494 |
92758 |
+ |
RS356 |
Unspecified |
| scaffold4860 |
93796 |
94050 |
- |
RS8868 |
Unspecified |
| scaffold4860 |
94061 |
94087 |
+ |
(AATA)n |
Simple_repeat |
| scaffold4860 |
94585 |
94611 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
95022 |
95047 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
96193 |
96259 |
+ |
(ATTTG)n |
Simple_repeat |
| scaffold4860 |
96924 |
96952 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
96953 |
96959 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold4860 |
97522 |
97547 |
+ |
(AAAGT)n |
Simple_repeat |
| scaffold4860 |
99173 |
99215 |
+ |
(AATTTTG)n |
Simple_repeat |
| scaffold4860 |
99281 |
99364 |
- |
PL517 |
Unspecified |
| scaffold4860 |
99308 |
99393 |
- |
PL517 |
Unspecified |
| scaffold4860 |
99501 |
99536 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold4860 |
100280 |
100312 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
101686 |
101795 |
+ |
RS14428 |
Unspecified |
| scaffold4860 |
104541 |
104618 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
104772 |
104788 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
104820 |
104896 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold4860 |
105318 |
105404 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold4860 |
105405 |
105420 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold4860 |
105433 |
105527 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4860 |
107531 |
107561 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold4860 |
107759 |
107803 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
108520 |
108724 |
+ |
RS15443 |
Unspecified |
| scaffold4860 |
108785 |
109007 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4860 |
109233 |
109437 |
+ |
RS15443 |
Unspecified |
| scaffold4860 |
109498 |
109720 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4860 |
109744 |
109921 |
+ |
RS38 |
Unspecified |
| scaffold4860 |
110618 |
110648 |
+ |
(TTTCGA)n |
Simple_repeat |
| scaffold4860 |
110830 |
110884 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
110897 |
110988 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4860 |
111002 |
111031 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold4860 |
111243 |
111300 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
111504 |
111525 |
+ |
(AACC)n |
Simple_repeat |
| scaffold4860 |
112462 |
112514 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4860 |
113032 |
113140 |
- |
ATRAN |
DNA? |
| scaffold4860 |
113273 |
113345 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold4860 |
113370 |
113429 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4860 |
113859 |
113898 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
114876 |
114904 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
115481 |
115582 |
- |
LTR-13_Mad |
LTR/Gypsy |
| scaffold4860 |
116662 |
116709 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
116895 |
116922 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
116925 |
116967 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
117527 |
117550 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
120853 |
120982 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
122471 |
122572 |
+ |
RS2386 |
Unspecified |
| scaffold4860 |
125598 |
125619 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
127646 |
127690 |
+ |
Copia3_HV-int |
LTR/Copia |
| scaffold4860 |
129794 |
129812 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
131473 |
131598 |
- |
RS421 |
Unspecified |
| scaffold4860 |
131805 |
131849 |
+ |
MuDR-3_VV |
DNA/MULE-MuDR |
| scaffold4860 |
132930 |
132952 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold4860 |
132953 |
132985 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4860 |
135754 |
135779 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4860 |
135986 |
136147 |
+ |
RS355 |
Unspecified |
| scaffold4860 |
136308 |
136578 |
- |
RS356 |
Unspecified |
| scaffold4860 |
136708 |
136789 |
+ |
RS355 |
Unspecified |
| scaffold4860 |
136784 |
136892 |
+ |
RS16382 |
Unspecified |
| scaffold4860 |
136925 |
137063 |
+ |
(TTATAAT)n |
Simple_repeat |
| scaffold4860 |
137019 |
137063 |
+ |
(TTATAAT)n |
Simple_repeat |
| scaffold4860 |
137649 |
137699 |
+ |
(ATAATA)n |
Simple_repeat |
| scaffold4860 |
137849 |
137875 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4860 |
138102 |
138128 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
138308 |
138330 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold4860 |
138434 |
138454 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
140446 |
140568 |
+ |
RS13675 |
Unspecified |
| scaffold4860 |
140671 |
140787 |
+ |
RS14447 |
Unspecified |
| scaffold4860 |
141867 |
142060 |
+ |
(CAT)n |
Simple_repeat |
| scaffold4860 |
142176 |
142211 |
+ |
(TGAATT)n |
Simple_repeat |
| scaffold4860 |
142317 |
142369 |
- |
RS1248 |
Unspecified |
| scaffold4860 |
142368 |
142437 |
+ |
RS1248 |
Unspecified |
| scaffold4860 |
142949 |
143075 |
+ |
(CAT)n |
Simple_repeat |
| scaffold4860 |
143076 |
143136 |
- |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold4860 |
143137 |
143142 |
+ |
(CAT)n |
Simple_repeat |
| scaffold4860 |
143258 |
143293 |
+ |
(TGAATT)n |
Simple_repeat |
| scaffold4860 |
143399 |
143451 |
- |
RS1248 |
Unspecified |
| scaffold4860 |
143450 |
143546 |
+ |
RS1248 |
Unspecified |
| scaffold4860 |
144154 |
144171 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
144305 |
144805 |
+ |
RS454 |
Unspecified |
| scaffold4860 |
144805 |
144988 |
+ |
RS454 |
Unspecified |
| scaffold4860 |
147486 |
147515 |
+ |
(AATAAAA)n |
Simple_repeat |
| scaffold4860 |
148073 |
148120 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
148178 |
148305 |
- |
RS9199 |
Unspecified |
| scaffold4860 |
149806 |
149928 |
+ |
RS13675 |
Unspecified |
| scaffold4860 |
150067 |
150183 |
+ |
RS14447 |
Unspecified |
| scaffold4860 |
151485 |
151542 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold4860 |
151793 |
151837 |
+ |
(TTTGAGAT)n |
Simple_repeat |
| scaffold4860 |
152823 |
152885 |
- |
RS1323 |
Unspecified |
| scaffold4860 |
159558 |
159612 |
+ |
(TC)n |
Simple_repeat |
| scaffold4860 |
160842 |
160976 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold4860 |
161361 |
161436 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold4860 |
161674 |
161801 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold4860 |
161802 |
161819 |
+ |
EnSpm-7_STu |
DNA/CMC-EnSpm |
| scaffold4860 |
161924 |
162060 |
- |
Copia-1_ST-LTR |
LTR/Copia |
| scaffold4860 |
168610 |
168953 |
+ |
RS224 |
Unspecified |
| scaffold4860 |
170549 |
170712 |
- |
RS2386 |
Unspecified |
| scaffold4860 |
170746 |
170764 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
171245 |
171389 |
+ |
RS115 |
Unspecified |
| scaffold4860 |
171499 |
171744 |
+ |
RS41 |
Unspecified |
| scaffold4860 |
172040 |
172084 |
+ |
(TAATTTC)n |
Simple_repeat |
| scaffold4860 |
172316 |
172811 |
+ |
RS894 |
Unspecified |
| scaffold4860 |
173266 |
173437 |
- |
RS106 |
Unspecified |
| scaffold4860 |
173523 |
173614 |
- |
RS1570 |
Unspecified |
| scaffold4860 |
173597 |
173659 |
+ |
RS14780 |
Unspecified |
| scaffold4860 |
174466 |
174621 |
+ |
RS1489 |
Unspecified |
| scaffold4860 |
174486 |
174738 |
+ |
RS3579 |
Unspecified |
| scaffold4860 |
175698 |
175787 |
+ |
(ATG)n |
Simple_repeat |
| scaffold4860 |
175715 |
175799 |
- |
ATCopia24I |
LTR/Copia |
| scaffold4860 |
176347 |
176366 |
+ |
(GGT)n |
Simple_repeat |
| scaffold4860 |
176445 |
176492 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold4860 |
176800 |
176947 |
+ |
RS356 |
Unspecified |
| scaffold4860 |
177206 |
177391 |
- |
RS17860 |
Unspecified |
| scaffold4860 |
177457 |
177556 |
- |
RS12449 |
Unspecified |
| scaffold4860 |
177657 |
177776 |
+ |
RS4475 |
Unspecified |
| scaffold4860 |
177954 |
178042 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold4860 |
178235 |
178324 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
178449 |
178973 |
+ |
PL202 |
Unspecified |
| scaffold4860 |
178766 |
179226 |
- |
PL266 |
Unspecified |
| scaffold4860 |
180480 |
180531 |
+ |
(ATACGT)n |
Simple_repeat |
| scaffold4860 |
181045 |
181089 |
- |
RS16382 |
Unspecified |
| scaffold4860 |
181133 |
181158 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
181160 |
181206 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
181396 |
181451 |
+ |
(TTC)n |
Simple_repeat |
| scaffold4860 |
181454 |
181498 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4860 |
183733 |
183795 |
+ |
RS17243 |
Unspecified |
| scaffold4860 |
183990 |
184092 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4860 |
184179 |
184238 |
+ |
(AATTTAT)n |
Simple_repeat |
| scaffold4860 |
184587 |
184620 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
184968 |
185002 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
185234 |
185361 |
+ |
RS7290 |
Unspecified |
| scaffold4860 |
186456 |
186638 |
- |
RS17860 |
Unspecified |
| scaffold4860 |
187024 |
187108 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold4860 |
187188 |
187240 |
+ |
(AATT)n |
Simple_repeat |
| scaffold4860 |
187783 |
187805 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
188462 |
188658 |
+ |
RS10706 |
Unspecified |
| scaffold4860 |
188665 |
188824 |
+ |
RS523 |
Unspecified |
| scaffold4860 |
188893 |
188970 |
+ |
hAT-14N1_ZM |
DNA/hAT-Tip100 |
| scaffold4860 |
192388 |
192467 |
+ |
(TTT)n |
Simple_repeat |
| scaffold4860 |
194275 |
194342 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold4860 |
194360 |
194488 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold4860 |
194527 |
194554 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
194703 |
194804 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold4860 |
194805 |
194873 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold4860 |
194874 |
194893 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold4860 |
195410 |
195456 |
+ |
(TTGGAT)n |
Simple_repeat |
| scaffold4860 |
196712 |
196742 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
196743 |
196749 |
+ |
(TGTTTT)n |
Simple_repeat |
| scaffold4860 |
198603 |
198782 |
+ |
RS18020 |
Unspecified |
| scaffold4860 |
198859 |
198904 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
199099 |
199319 |
- |
RS18 |
Unspecified |
| scaffold4860 |
199476 |
199510 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
202743 |
203008 |
- |
RS102 |
Unspecified |
| scaffold4860 |
203691 |
203711 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
204451 |
204490 |
+ |
(TGA)n |
Simple_repeat |
| scaffold4860 |
216518 |
216563 |
+ |
(AATTGAA)n |
Simple_repeat |
| scaffold4860 |
216896 |
216940 |
+ |
(CGG)n |
Simple_repeat |
| scaffold4860 |
216989 |
217010 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
217361 |
217406 |
- |
RS15316 |
Unspecified |
| scaffold4860 |
220034 |
220434 |
+ |
PL304 |
Unspecified |
| scaffold4860 |
220461 |
220537 |
+ |
(TT)n |
Simple_repeat |
| scaffold4860 |
220717 |
220774 |
+ |
PL601 |
Unspecified |
| scaffold4860 |
220854 |
220955 |
+ |
RS4475 |
Unspecified |
| scaffold4860 |
221067 |
221120 |
+ |
RS2827 |
Unspecified |
| scaffold4860 |
221074 |
221250 |
- |
RS7235 |
Unspecified |
| scaffold4860 |
221522 |
221577 |
- |
RLG_scMaximus_1_3-I |
LTR/Copia |
| scaffold4860 |
221703 |
222162 |
+ |
PL90 |
Unspecified |
| scaffold4860 |
222255 |
222282 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold4860 |
222723 |
222771 |
+ |
(TCAGT)n |
Simple_repeat |
| scaffold4860 |
224990 |
225060 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold4860 |
225485 |
225513 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
226078 |
226111 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4860 |
228974 |
229069 |
- |
RS4971 |
Unspecified |
| scaffold4860 |
229487 |
229527 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
229887 |
229993 |
+ |
RS13341 |
Unspecified |
| scaffold4860 |
229935 |
230040 |
- |
RS11314 |
Unspecified |
| scaffold4860 |
231028 |
231091 |
+ |
(AT)n |
Simple_repeat |
| scaffold4860 |
234637 |
234656 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
234788 |
234809 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
235739 |
235756 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
236394 |
236440 |
+ |
(AGA)n |
Simple_repeat |
| scaffold4860 |
238325 |
238388 |
- |
RS18151 |
Unspecified |
| scaffold4860 |
238489 |
238905 |
- |
RS3162 |
Unspecified |
| scaffold4860 |
240280 |
240686 |
- |
PL764 |
Unspecified |
| scaffold4860 |
242126 |
242166 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
242229 |
242272 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4860 |
242931 |
243014 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
244245 |
244347 |
- |
RS4475 |
Unspecified |
| scaffold4860 |
244252 |
244359 |
+ |
RS12449 |
Unspecified |
| scaffold4860 |
245795 |
245864 |
+ |
(AATT)n |
Simple_repeat |
| scaffold4860 |
246281 |
246308 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4860 |
248217 |
248235 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
248348 |
248370 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
248611 |
248812 |
+ |
RS1829 |
Unspecified |
| scaffold4860 |
249042 |
249060 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
249180 |
249331 |
- |
RS54 |
Unspecified |
| scaffold4860 |
250013 |
250255 |
- |
RS4 |
Unspecified |
| scaffold4860 |
250518 |
250554 |
+ |
(TAATAAT)n |
Simple_repeat |
| scaffold4860 |
250811 |
250859 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold4860 |
251714 |
251745 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold4860 |
253908 |
253952 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold4860 |
254296 |
254319 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
254873 |
254914 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
258563 |
258676 |
+ |
PL281 |
Unspecified |
| scaffold4860 |
258760 |
258854 |
+ |
RS972 |
Unspecified |
| scaffold4860 |
258760 |
258842 |
- |
RS750 |
Unspecified |
| scaffold4860 |
259395 |
259432 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
259496 |
259503 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
259504 |
259553 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
259566 |
259621 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4860 |
262052 |
262087 |
+ |
(TATATC)n |
Simple_repeat |
| scaffold4860 |
262593 |
262648 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
262645 |
262757 |
- |
PL422 |
Unspecified |
| scaffold4860 |
262757 |
263060 |
+ |
RS58 |
Unspecified |
| scaffold4860 |
263611 |
263691 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
263810 |
263848 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold4860 |
264532 |
264562 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
271853 |
271884 |
+ |
(TATT)n |
Simple_repeat |
| scaffold4860 |
274072 |
274103 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
274177 |
274194 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
274568 |
274693 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
276429 |
276450 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
276896 |
277051 |
+ |
RS6841 |
Unspecified |
| scaffold4860 |
276913 |
277154 |
+ |
RS4 |
Unspecified |
| scaffold4860 |
277811 |
277841 |
+ |
(CAC)n |
Simple_repeat |
| scaffold4860 |
279415 |
279460 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
279754 |
279791 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
283641 |
283671 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4860 |
284747 |
284797 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
285715 |
285796 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
287291 |
287342 |
- |
RS16382 |
Unspecified |
| scaffold4860 |
288344 |
288360 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
289210 |
289270 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold4860 |
289770 |
289856 |
- |
RS18316 |
Unspecified |
| scaffold4860 |
289781 |
289865 |
+ |
RS4475 |
Unspecified |
| scaffold4860 |
290454 |
290505 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4860 |
291927 |
291971 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
292526 |
292564 |
+ |
(AAT)n |
Simple_repeat |
| scaffold4860 |
292708 |
292926 |
- |
RS726 |
Unspecified |
| scaffold4860 |
294013 |
294056 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4860 |
294917 |
294943 |
+ |
(TAAAT)n |
Simple_repeat |
| scaffold4860 |
296679 |
296712 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
298230 |
298291 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
298860 |
299361 |
+ |
RS922 |
Unspecified |
| scaffold4860 |
301757 |
301981 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold4860 |
302170 |
302201 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold4860 |
302237 |
302325 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
302700 |
302734 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
303113 |
303151 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
308257 |
308287 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4860 |
310212 |
310300 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
310711 |
310808 |
+ |
RS16382 |
Unspecified |
| scaffold4860 |
310715 |
310820 |
+ |
RS16836 |
Unspecified |
| scaffold4860 |
310958 |
311003 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
311241 |
311287 |
+ |
(TTAAG)n |
Simple_repeat |
| scaffold4860 |
311851 |
311905 |
+ |
(ATAATTT)n |
Simple_repeat |
| scaffold4860 |
312268 |
312340 |
+ |
RS908 |
Unspecified |
| scaffold4860 |
313027 |
313072 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold4860 |
313257 |
313298 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
313370 |
313405 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold4860 |
313453 |
313502 |
+ |
(AT)n |
Simple_repeat |
| scaffold4860 |
313554 |
313729 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold4860 |
314742 |
314801 |
- |
RS16382 |
Unspecified |
| scaffold4860 |
315031 |
315881 |
+ |
RS4181 |
Unspecified |
| scaffold4860 |
315364 |
316414 |
+ |
RS10962 |
Unspecified |
| scaffold4860 |
316435 |
316512 |
+ |
(TTATCA)n |
Simple_repeat |
| scaffold4860 |
316829 |
317067 |
+ |
Gypsy-120_GM-I |
LTR/Gypsy |
| scaffold4860 |
316829 |
316879 |
+ |
Gypsy-120_GM-I |
LTR/Gypsy |
| scaffold4860 |
316868 |
317067 |
+ |
RS3447 |
Unspecified |
| scaffold4860 |
317578 |
317666 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold4860 |
317667 |
317709 |
+ |
(ATA)n |
Simple_repeat |
| scaffold4860 |
317710 |
317799 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
317955 |
318010 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4860 |
318054 |
318126 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold4860 |
318781 |
319012 |
- |
RS445 |
Unspecified |
| scaffold4860 |
320368 |
320391 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
321866 |
321895 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
321990 |
322165 |
+ |
RS5223 |
Unspecified |
| scaffold4860 |
322342 |
323335 |
+ |
RS1730 |
Unspecified |
| scaffold4860 |
324456 |
324538 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold4860 |
324593 |
324622 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
324844 |
324947 |
+ |
RS1 |
Unspecified |
| scaffold4860 |
324999 |
325048 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold4860 |
325433 |
325474 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4860 |
326142 |
326233 |
- |
RS16382 |
Unspecified |
| scaffold4860 |
326829 |
327010 |
- |
RS1 |
Unspecified |
| scaffold4860 |
327057 |
327086 |
+ |
A-rich |
Low_complexity |
| scaffold4860 |
327222 |
327278 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
327662 |
327703 |
+ |
(CATTAT)n |
Simple_repeat |
| scaffold4860 |
328303 |
328331 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold4860 |
328464 |
328907 |
- |
PL2 |
Unspecified |
| scaffold4860 |
329158 |
329281 |
+ |
RS329 |
Unspecified |
| scaffold4860 |
329301 |
329514 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold4860 |
329427 |
329514 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold4860 |
329953 |
330065 |
- |
RS6935 |
Unspecified |
| scaffold4860 |
331263 |
331431 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
331263 |
331297 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
331280 |
331431 |
- |
RS453 |
Unspecified |
| scaffold4860 |
331791 |
331865 |
+ |
RS5306 |
Unspecified |
| scaffold4860 |
333491 |
333537 |
+ |
(ATT)n |
Simple_repeat |
| scaffold4860 |
335244 |
335370 |
+ |
RS14499 |
Unspecified |
| scaffold4860 |
336538 |
336574 |
- |
RS1340 |
Unspecified |
| scaffold4860 |
336575 |
336770 |
- |
RS1340 |
Unspecified |
| scaffold4860 |
336583 |
336799 |
- |
RS1340 |
Unspecified |
| scaffold4860 |
337022 |
337060 |
+ |
(CCCAG)n |
Simple_repeat |
| scaffold4860 |
337134 |
337181 |
+ |
GA-rich |
Low_complexity |
| scaffold4860 |
337291 |
337356 |
+ |
(TTTCTTC)n |
Simple_repeat |
| scaffold4860 |
340944 |
340984 |
+ |
(CACTAGT)n |
Simple_repeat |
| scaffold4860 |
345003 |
345053 |
- |
RS13104 |
Unspecified |
| scaffold4860 |
345014 |
345525 |
- |
RS314 |
Unspecified |
| scaffold4860 |
346830 |
346882 |
+ |
(TTA)n |
Simple_repeat |
| scaffold4860 |
347445 |
347491 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
347496 |
347562 |
+ |
(TCTTTTC)n |
Simple_repeat |
| scaffold4860 |
347698 |
347731 |
+ |
(TAT)n |
Simple_repeat |
| scaffold4860 |
348072 |
348110 |
+ |
GA-rich |
Low_complexity |
| scaffold4860 |
348239 |
348276 |
+ |
(AACTAAT)n |
Simple_repeat |
| scaffold4860 |
348394 |
348422 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold4860 |
348423 |
348442 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
348898 |
348965 |
- |
RS748 |
Unspecified |
| scaffold4860 |
349472 |
349505 |
+ |
(CTT)n |
Simple_repeat |
| scaffold4860 |
349506 |
349540 |
+ |
(AAC)n |
Simple_repeat |
| scaffold4860 |
349553 |
349600 |
+ |
(AATTGA)n |
Simple_repeat |
| scaffold4860 |
356259 |
356310 |
+ |
(CTCCT)n |
Simple_repeat |
| scaffold4860 |
357793 |
357817 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
357991 |
358019 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
358208 |
358246 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold4860 |
358637 |
358675 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold4860 |
360562 |
360600 |
+ |
(TGA)n |
Simple_repeat |
| scaffold4860 |
363992 |
364031 |
+ |
(AATA)n |
Simple_repeat |
| scaffold4860 |
366510 |
366690 |
- |
Gypsy34-ZM_I-int |
LTR/Gypsy |
| scaffold4860 |
367695 |
367718 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
367721 |
367956 |
- |
Copia-33_GM-I |
LTR |
| scaffold4860 |
368021 |
368051 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
368339 |
368364 |
+ |
(T)n |
Simple_repeat |
| scaffold4860 |
368435 |
368473 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold4860 |
369048 |
369089 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
369048 |
369167 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
369084 |
369167 |
+ |
RS16201 |
Unspecified |
| scaffold4860 |
370174 |
370212 |
+ |
(A)n |
Simple_repeat |
| scaffold4860 |
370784 |
370811 |
+ |
(T)n |
Simple_repeat |