scaffold527 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold527 |
855 |
999 |
- |
RS5014 |
Unspecified |
| scaffold527 |
2807 |
2828 |
+ |
(TATT)n |
Simple_repeat |
| scaffold527 |
4306 |
4531 |
+ |
RS13321 |
Unspecified |
| scaffold527 |
5569 |
8393 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold527 |
8297 |
9823 |
- |
PL816 |
Unspecified |
| scaffold527 |
10046 |
10113 |
+ |
(TAT)n |
Simple_repeat |
| scaffold527 |
10431 |
11131 |
+ |
(TGT)n |
Simple_repeat |
| scaffold527 |
11085 |
11131 |
+ |
(TGT)n |
Simple_repeat |
| scaffold527 |
11161 |
11243 |
+ |
(GTGCTT)n |
Simple_repeat |
| scaffold527 |
11278 |
11321 |
+ |
(GTGTAT)n |
Simple_repeat |
| scaffold527 |
11534 |
11866 |
+ |
RS1064 |
Unspecified |
| scaffold527 |
13765 |
13776 |
+ |
(TTGCTT)n |
Simple_repeat |
| scaffold527 |
13777 |
13818 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold527 |
13819 |
13837 |
+ |
(TTGCTT)n |
Simple_repeat |
| scaffold527 |
14856 |
15059 |
+ |
RS1317 |
Unspecified |
| scaffold527 |
15671 |
15733 |
+ |
(AATAGAA)n |
Simple_repeat |
| scaffold527 |
17664 |
17709 |
+ |
GA-rich |
Low_complexity |
| scaffold527 |
17977 |
18018 |
+ |
(TTA)n |
Simple_repeat |
| scaffold527 |
18019 |
18037 |
+ |
(TTATTGA)n |
Simple_repeat |
| scaffold527 |
18769 |
18818 |
+ |
(TTAGTT)n |
Simple_repeat |
| scaffold527 |
19930 |
20039 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold527 |
20117 |
20160 |
+ |
A-rich |
Low_complexity |
| scaffold527 |
23813 |
24078 |
- |
RS126 |
Unspecified |
| scaffold527 |
24191 |
24242 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold527 |
24593 |
25659 |
- |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold527 |
25975 |
27746 |
- |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold527 |
27967 |
28023 |
+ |
(TTGGTTG)n |
Simple_repeat |
| scaffold527 |
29431 |
29487 |
+ |
(GGTTTT)n |
Simple_repeat |
| scaffold527 |
31010 |
31630 |
- |
RS1207 |
Unspecified |
| scaffold527 |
31105 |
31721 |
- |
RS661 |
Unspecified |
| scaffold527 |
31297 |
31835 |
- |
RS1930 |
Unspecified |
| scaffold527 |
31936 |
32616 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold527 |
33063 |
33155 |
- |
Copia15-VV_I-int |
LTR/Copia |
| scaffold527 |
33429 |
33606 |
+ |
RS1120 |
Unspecified |
| scaffold527 |
35587 |
35639 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold527 |
35660 |
36369 |
- |
RS101 |
Unspecified |
| scaffold527 |
36772 |
36836 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold527 |
38391 |
38447 |
+ |
(GGTTTT)n |
Simple_repeat |
| scaffold527 |
39280 |
39387 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold527 |
39968 |
40073 |
+ |
RS110 |
Unspecified |
| scaffold527 |
42121 |
42175 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold527 |
44771 |
44885 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold527 |
46231 |
46264 |
+ |
(TTA)n |
Simple_repeat |
| scaffold527 |
46391 |
46443 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold527 |
47540 |
48930 |
+ |
RS7 |
Unspecified |
| scaffold527 |
50248 |
50318 |
+ |
Gypsy-19_SB-I |
LTR/Gypsy |
| scaffold527 |
51010 |
51125 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold527 |
51588 |
51645 |
+ |
(GTTGA)n |
Simple_repeat |
| scaffold527 |
52585 |
53608 |
+ |
PL956 |
Unspecified |
| scaffold527 |
53629 |
54031 |
+ |
RS52 |
Unspecified |
| scaffold527 |
54031 |
54256 |
- |
RS830 |
Unspecified |
| scaffold527 |
57637 |
57821 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold527 |
58340 |
58380 |
+ |
(TTTGC)n |
Simple_repeat |
| scaffold527 |
58584 |
58624 |
+ |
(TTTGC)n |
Simple_repeat |
| scaffold527 |
59038 |
59075 |
+ |
(TTTGCA)n |
Simple_repeat |
| scaffold527 |
59584 |
59628 |
+ |
A-rich |
Low_complexity |
| scaffold527 |
61833 |
62379 |
- |
RS1154 |
Unspecified |
| scaffold527 |
61902 |
62480 |
- |
RS6457 |
Unspecified |
| scaffold527 |
62516 |
62693 |
+ |
(ATACGT)n |
Simple_repeat |
| scaffold527 |
62694 |
62747 |
+ |
(GTGAATA)n |
Simple_repeat |
| scaffold527 |
65295 |
65577 |
+ |
PL219 |
Unspecified |
| scaffold527 |
66099 |
66592 |
+ |
RS3423 |
Unspecified |
| scaffold527 |
67050 |
67086 |
+ |
(AAACACG)n |
Simple_repeat |
| scaffold527 |
67169 |
68498 |
+ |
RS443 |
Unspecified |
| scaffold527 |
68542 |
68591 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold527 |
71132 |
71176 |
+ |
(TCCAACAT)n |
Simple_repeat |
| scaffold527 |
71466 |
71505 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold527 |
71869 |
71908 |
+ |
A-rich |
Low_complexity |
| scaffold527 |
72426 |
72950 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold527 |
73056 |
73650 |
- |
RS4884 |
Unspecified |
| scaffold527 |
73719 |
74144 |
+ |
RS756 |
Unspecified |
| scaffold527 |
73719 |
74079 |
+ |
RS4278 |
Unspecified |
| scaffold527 |
74027 |
74645 |
- |
RS1210 |
Unspecified |
| scaffold527 |
74647 |
74683 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold527 |
139442 |
139544 |
+ |
RS14794 |
Unspecified |