scaffold5280 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5280 |
4 |
67 |
+ |
A-rich |
Low_complexity |
| scaffold5280 |
697 |
756 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5280 |
1930 |
2366 |
- |
RS3795 |
Unspecified |
| scaffold5280 |
2370 |
2549 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold5280 |
3100 |
4014 |
+ |
PL526 |
Unspecified |
| scaffold5280 |
3362 |
4110 |
- |
RS494 |
Unspecified |
| scaffold5280 |
4332 |
4385 |
+ |
(TTGACT)n |
Simple_repeat |
| scaffold5280 |
4976 |
4995 |
+ |
(T)n |
Simple_repeat |
| scaffold5280 |
6610 |
6646 |
+ |
A-rich |
Low_complexity |
| scaffold5280 |
7916 |
7963 |
+ |
A-rich |
Low_complexity |
| scaffold5280 |
8488 |
8517 |
+ |
(T)n |
Simple_repeat |
| scaffold5280 |
10507 |
10540 |
+ |
GA-rich |
Low_complexity |
| scaffold5280 |
12971 |
13010 |
+ |
CINFUL2_ZM-int |
LTR/Gypsy |
| scaffold5280 |
13397 |
13454 |
+ |
A-rich |
Low_complexity |
| scaffold5280 |
13951 |
13985 |
+ |
(CATACTA)n |
Simple_repeat |
| scaffold5280 |
14593 |
14626 |
+ |
(TTACAA)n |
Simple_repeat |
| scaffold5280 |
14847 |
14870 |
+ |
(ATG)n |
Simple_repeat |
| scaffold5280 |
14871 |
14947 |
- |
ATCopia24I |
LTR/Copia |
| scaffold5280 |
14948 |
14966 |
+ |
(ATG)n |
Simple_repeat |
| scaffold5280 |
14967 |
15009 |
+ |
GA-rich |
Low_complexity |
| scaffold5280 |
15029 |
15158 |
+ |
RS2064 |
Unspecified |
| scaffold5280 |
15750 |
15779 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5280 |
15922 |
16020 |
- |
RS3203 |
Unspecified |
| scaffold5280 |
16026 |
16083 |
+ |
SINE2-1_STu |
SINE/tRNA |
| scaffold5280 |
16186 |
16230 |
+ |
RS41 |
Unspecified |
| scaffold5280 |
16227 |
16361 |
- |
RS3203 |
Unspecified |
| scaffold5280 |
16459 |
16516 |
+ |
(TTATTA)n |
Simple_repeat |
| scaffold5280 |
16770 |
16794 |
+ |
(T)n |
Simple_repeat |
| scaffold5280 |
16816 |
16844 |
+ |
(ACA)n |
Simple_repeat |
| scaffold5280 |
16865 |
16987 |
+ |
A-rich |
Low_complexity |
| scaffold5280 |
17148 |
17256 |
- |
RS3203 |
Unspecified |
| scaffold5280 |
17759 |
17795 |
- |
RS3203 |
Unspecified |
| scaffold5280 |
17888 |
18067 |
+ |
RS5540 |
Unspecified |
| scaffold5280 |
17959 |
18187 |
+ |
RS10163 |
Unspecified |
| scaffold5280 |
18329 |
18347 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5280 |
19641 |
19764 |
+ |
RS9911 |
Unspecified |
| scaffold5280 |
20070 |
20127 |
+ |
(A)n |
Simple_repeat |
| scaffold5280 |
20211 |
20248 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold5280 |
20648 |
20679 |
+ |
(CATTTT)n |
Simple_repeat |
| scaffold5280 |
21440 |
21461 |
+ |
(A)n |
Simple_repeat |
| scaffold5280 |
21885 |
21946 |
+ |
(TTTTCTGAAG)n |
Simple_repeat |
| scaffold5280 |
23086 |
23132 |
+ |
PL608 |
Unspecified |
| scaffold5280 |
23178 |
23424 |
- |
RS1627 |
Unspecified |
| scaffold5280 |
23484 |
23834 |
+ |
RS158 |
Unspecified |
| scaffold5280 |
23860 |
24085 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5280 |
24578 |
24998 |
+ |
PL729 |
Unspecified |
| scaffold5280 |
25105 |
25134 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5280 |
25139 |
25246 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold5280 |
25437 |
25501 |
+ |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold5280 |
26027 |
26285 |
+ |
RS4151 |
Unspecified |
| scaffold5280 |
28063 |
28100 |
+ |
Copia-52_SB-I |
LTR/Copia |
| scaffold5280 |
29988 |
30032 |
+ |
A-rich |
Low_complexity |
| scaffold5280 |
30903 |
30920 |
+ |
(A)n |
Simple_repeat |
| scaffold5280 |
31179 |
31361 |
- |
RS453 |
Unspecified |
| scaffold5280 |
31983 |
32061 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold5280 |
33973 |
34063 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5280 |
34584 |
34641 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold5280 |
35062 |
35140 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5280 |
35141 |
35159 |
+ |
(CTA)n |
Simple_repeat |
| scaffold5280 |
36995 |
37032 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5280 |
37267 |
37287 |
+ |
(CAT)n |
Simple_repeat |
| scaffold5280 |
37288 |
37352 |
+ |
RLG_scMaximus_1_5-I |
LTR/Copia |
| scaffold5280 |
37353 |
37371 |
+ |
(CAT)n |
Simple_repeat |
| scaffold5280 |
38181 |
38226 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5280 |
38560 |
38773 |
- |
RS2364 |
Unspecified |
| scaffold5280 |
39311 |
40120 |
- |
RS608 |
Unspecified |
| scaffold5280 |
39536 |
40225 |
- |
RS253 |
Unspecified |
| scaffold5280 |
40233 |
40339 |
+ |
(CTTGTTG)n |
Simple_repeat |
| scaffold5280 |
40308 |
40341 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold5280 |
40347 |
40764 |
+ |
RS9597 |
Unspecified |
| scaffold5280 |
40739 |
40891 |
+ |
RS11477 |
Unspecified |
| scaffold5280 |
40891 |
41093 |
+ |
RS158 |
Unspecified |
| scaffold5280 |
44722 |
45170 |
+ |
RS519 |
Unspecified |
| scaffold5280 |
45164 |
45531 |
- |
RS1451 |
Unspecified |