scaffold5283 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold5283 |
627 |
645 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
789 |
856 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
1015 |
1062 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
1390 |
1425 |
+ |
(TATTTT)n |
Simple_repeat |
scaffold5283 |
2429 |
2453 |
+ |
(ATAAA)n |
Simple_repeat |
scaffold5283 |
5010 |
5452 |
+ |
RS15697 |
Unspecified |
scaffold5283 |
5957 |
5997 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
6089 |
6134 |
+ |
(AAT)n |
Simple_repeat |
scaffold5283 |
6292 |
6338 |
+ |
(ATT)n |
Simple_repeat |
scaffold5283 |
6346 |
6363 |
+ |
(TTG)n |
Simple_repeat |
scaffold5283 |
6796 |
6838 |
+ |
(GTTACC)n |
Simple_repeat |
scaffold5283 |
7205 |
7233 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
7459 |
7489 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
7922 |
8183 |
- |
RS68 |
Unspecified |
scaffold5283 |
8021 |
8463 |
+ |
RS15697 |
Unspecified |
scaffold5283 |
8997 |
9056 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold5283 |
9098 |
9623 |
+ |
PL28 |
Unspecified |
scaffold5283 |
9616 |
10251 |
- |
PL38 |
Unspecified |
scaffold5283 |
10415 |
10453 |
- |
RS308 |
Unspecified |
scaffold5283 |
11376 |
11457 |
- |
RS54 |
Unspecified |
scaffold5283 |
11385 |
11524 |
+ |
RS54 |
Unspecified |
scaffold5283 |
11899 |
12068 |
+ |
RS10787 |
Unspecified |
scaffold5283 |
11917 |
12359 |
- |
PL125 |
Unspecified |
scaffold5283 |
12339 |
12922 |
+ |
PL503 |
Unspecified |
scaffold5283 |
12913 |
13103 |
+ |
PL466 |
Unspecified |
scaffold5283 |
13024 |
13113 |
- |
PL132 |
Unspecified |
scaffold5283 |
14142 |
14169 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
14235 |
14298 |
+ |
GA-rich |
Low_complexity |
scaffold5283 |
14949 |
15049 |
+ |
(CAC)n |
Simple_repeat |
scaffold5283 |
15603 |
15652 |
+ |
RS3884 |
Unspecified |
scaffold5283 |
15653 |
16119 |
- |
RS668 |
Unspecified |
scaffold5283 |
16257 |
16287 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
16431 |
16563 |
+ |
RS8 |
Unspecified |
scaffold5283 |
16630 |
16697 |
+ |
(ACA)n |
Simple_repeat |
scaffold5283 |
16805 |
16875 |
+ |
(TTCACT)n |
Simple_repeat |
scaffold5283 |
17160 |
17230 |
+ |
GA-rich |
Low_complexity |
scaffold5283 |
17670 |
17705 |
+ |
(CTT)n |
Simple_repeat |
scaffold5283 |
17990 |
18002 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
18003 |
18019 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
18020 |
18061 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
18534 |
18624 |
+ |
RS3087 |
Unspecified |
scaffold5283 |
18629 |
18716 |
- |
RS9602 |
Unspecified |
scaffold5283 |
18772 |
18817 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
19423 |
19519 |
+ |
RS8134 |
Unspecified |
scaffold5283 |
19514 |
19612 |
+ |
RS13324 |
Unspecified |
scaffold5283 |
19705 |
19860 |
+ |
(TC)n |
Simple_repeat |
scaffold5283 |
19926 |
20017 |
+ |
(TTG)n |
Simple_repeat |
scaffold5283 |
19972 |
20031 |
+ |
(TTT)n |
Simple_repeat |
scaffold5283 |
20648 |
20675 |
+ |
(ATAAT)n |
Simple_repeat |
scaffold5283 |
20780 |
20832 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
20896 |
20943 |
+ |
RS8134 |
Unspecified |
scaffold5283 |
21041 |
21198 |
+ |
RS3087 |
Unspecified |
scaffold5283 |
21164 |
21317 |
+ |
RS10239 |
Unspecified |
scaffold5283 |
21517 |
21642 |
+ |
RS5992 |
Unspecified |
scaffold5283 |
21770 |
21894 |
- |
RS2382 |
Unspecified |
scaffold5283 |
21784 |
21961 |
+ |
RS503 |
Unspecified |
scaffold5283 |
22200 |
22570 |
- |
RS8179 |
Unspecified |
scaffold5283 |
22452 |
22784 |
- |
RS3884 |
Unspecified |
scaffold5283 |
26142 |
26422 |
- |
RS8579 |
Unspecified |
scaffold5283 |
26830 |
27472 |
+ |
LINE1I_MT |
LINE/L1 |
scaffold5283 |
28711 |
29074 |
+ |
RS12598 |
Unspecified |
scaffold5283 |
29056 |
29212 |
+ |
RS14548 |
Unspecified |
scaffold5283 |
29258 |
29947 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold5283 |
29748 |
29882 |
+ |
Copia-16_CP-I |
LTR/Copia |
scaffold5283 |
30372 |
30615 |
+ |
Copia-16_CP-I |
LTR/Copia |
scaffold5283 |
30842 |
31745 |
+ |
Copia-16_CP-I |
LTR/Copia |
scaffold5283 |
32132 |
33716 |
+ |
Copia-16_CP-I |
LTR/Copia |
scaffold5283 |
33746 |
34109 |
+ |
RS12598 |
Unspecified |
scaffold5283 |
34145 |
34168 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
34631 |
34699 |
+ |
RS146 |
Unspecified |
scaffold5283 |
34691 |
35011 |
- |
RS1649 |
Unspecified |
scaffold5283 |
35225 |
35263 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
35635 |
35653 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
35827 |
35850 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
37634 |
37812 |
- |
RS549 |
Unspecified |
scaffold5283 |
37876 |
37912 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold5283 |
38185 |
38271 |
+ |
RS285 |
Unspecified |
scaffold5283 |
38763 |
38811 |
+ |
(AACCAG)n |
Simple_repeat |
scaffold5283 |
39697 |
39764 |
+ |
(TAAT)n |
Simple_repeat |
scaffold5283 |
39902 |
39999 |
- |
RS4475 |
Unspecified |
scaffold5283 |
40086 |
40138 |
+ |
(AATTAA)n |
Simple_repeat |
scaffold5283 |
40742 |
40775 |
+ |
(ATTTCT)n |
Simple_repeat |
scaffold5283 |
42279 |
42328 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
42462 |
42500 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
43185 |
43325 |
- |
RS4838 |
Unspecified |
scaffold5283 |
45216 |
45374 |
+ |
PL517 |
Unspecified |
scaffold5283 |
46328 |
46423 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
46940 |
46970 |
+ |
(TTTTAG)n |
Simple_repeat |
scaffold5283 |
47401 |
47475 |
- |
RS3755 |
Unspecified |
scaffold5283 |
47828 |
47929 |
+ |
RS2701 |
Unspecified |
scaffold5283 |
48016 |
48047 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
49469 |
49556 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
50476 |
50614 |
+ |
RS4765 |
Unspecified |
scaffold5283 |
50779 |
50813 |
+ |
(TTA)n |
Simple_repeat |
scaffold5283 |
51124 |
51155 |
+ |
(ATTTA)n |
Simple_repeat |
scaffold5283 |
54903 |
54921 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
55006 |
55047 |
+ |
(GTGAATG)n |
Simple_repeat |
scaffold5283 |
55078 |
55097 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
56512 |
56682 |
- |
RS17860 |
Unspecified |
scaffold5283 |
58098 |
58121 |
+ |
(TAT)n |
Simple_repeat |
scaffold5283 |
62353 |
62380 |
+ |
(GGCCC)n |
Simple_repeat |
scaffold5283 |
63010 |
63030 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
63624 |
63647 |
+ |
(TTA)n |
Simple_repeat |
scaffold5283 |
63647 |
63829 |
+ |
PL81 |
Unspecified |
scaffold5283 |
63862 |
64374 |
- |
RS12218 |
Unspecified |
scaffold5283 |
64536 |
64562 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
64816 |
64917 |
+ |
RS656 |
Unspecified |
scaffold5283 |
64917 |
65329 |
+ |
PL714 |
Unspecified |
scaffold5283 |
65331 |
65650 |
- |
RS266 |
Unspecified |
scaffold5283 |
65649 |
65883 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
65860 |
65883 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
66018 |
66042 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
66675 |
66852 |
- |
RS7396 |
Unspecified |
scaffold5283 |
66883 |
67180 |
- |
RS266 |
Unspecified |
scaffold5283 |
67206 |
67280 |
+ |
(ATTAA)n |
Simple_repeat |
scaffold5283 |
67288 |
67320 |
+ |
(TTA)n |
Simple_repeat |
scaffold5283 |
67532 |
67596 |
+ |
(ATTTTT)n |
Simple_repeat |
scaffold5283 |
68646 |
68812 |
+ |
RS533 |
Unspecified |
scaffold5283 |
68811 |
69032 |
+ |
(ATCA)n |
Simple_repeat |
scaffold5283 |
68935 |
69032 |
+ |
(ATCA)n |
Simple_repeat |
scaffold5283 |
69703 |
69750 |
+ |
(TATAA)n |
Simple_repeat |
scaffold5283 |
70008 |
70040 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
70097 |
70368 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold5283 |
70646 |
70808 |
+ |
RS1168 |
Unspecified |
scaffold5283 |
70993 |
71015 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
71053 |
71102 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold5283 |
71184 |
71237 |
+ |
CEREBA_HV-int |
LTR/Gypsy |
scaffold5283 |
71393 |
71461 |
+ |
(TGTTTTG)n |
Simple_repeat |
scaffold5283 |
71918 |
72013 |
+ |
Copia-96_ST-I |
LTR/Copia |
scaffold5283 |
72190 |
72232 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
75635 |
75671 |
+ |
(TTTGTT)n |
Simple_repeat |
scaffold5283 |
76506 |
76550 |
+ |
(TGATTC)n |
Simple_repeat |
scaffold5283 |
80805 |
80864 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold5283 |
80840 |
80865 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
82226 |
82340 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold5283 |
82495 |
82637 |
+ |
(TCGGG)n |
Simple_repeat |
scaffold5283 |
82719 |
82837 |
+ |
RS370 |
Unspecified |
scaffold5283 |
83815 |
84037 |
+ |
GA-rich |
Low_complexity |
scaffold5283 |
84009 |
84037 |
+ |
GA-rich |
Low_complexity |
scaffold5283 |
84038 |
84078 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
84079 |
84183 |
- |
RS82 |
Unspecified |
scaffold5283 |
84271 |
84300 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
84492 |
84623 |
+ |
RS2251 |
Unspecified |
scaffold5283 |
85481 |
85516 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
85671 |
85714 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
86109 |
86144 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
86383 |
86467 |
+ |
RS2734 |
Unspecified |
scaffold5283 |
87203 |
87308 |
- |
RS82 |
Unspecified |
scaffold5283 |
87551 |
87576 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
87681 |
87756 |
+ |
(TTTATTT)n |
Simple_repeat |
scaffold5283 |
87909 |
87966 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
88032 |
88068 |
+ |
(AATGGAG)n |
Simple_repeat |
scaffold5283 |
88560 |
88611 |
+ |
GA-rich |
Low_complexity |
scaffold5283 |
88875 |
88974 |
- |
RS1412 |
Unspecified |
scaffold5283 |
91323 |
91391 |
+ |
(ACAT)n |
Simple_repeat |
scaffold5283 |
93059 |
93105 |
+ |
A-rich |
Low_complexity |
scaffold5283 |
93707 |
93747 |
+ |
(ATAGAT)n |
Simple_repeat |
scaffold5283 |
93771 |
93965 |
+ |
RS7727 |
Unspecified |
scaffold5283 |
93883 |
94148 |
+ |
RS10882 |
Unspecified |
scaffold5283 |
96786 |
96806 |
+ |
(ATT)n |
Simple_repeat |
scaffold5283 |
97114 |
97153 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
97684 |
97949 |
+ |
RS82 |
Unspecified |
scaffold5283 |
98016 |
98036 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
98591 |
98624 |
+ |
(TTCTT)n |
Simple_repeat |
scaffold5283 |
99128 |
99152 |
+ |
(T)n |
Simple_repeat |
scaffold5283 |
99477 |
99696 |
+ |
RS338 |
Unspecified |
scaffold5283 |
101980 |
102016 |
+ |
(AATTGAAT)n |
Simple_repeat |
scaffold5283 |
104207 |
104230 |
+ |
(TTTA)n |
Simple_repeat |
scaffold5283 |
104577 |
104611 |
+ |
(A)n |
Simple_repeat |
scaffold5283 |
107079 |
107456 |
+ |
PL580 |
Unspecified |