scaffold5462 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5462 |
1 |
77 |
- |
RS189 |
Unspecified |
| scaffold5462 |
347 |
447 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5462 |
709 |
830 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold5462 |
832 |
853 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold5462 |
889 |
975 |
- |
RS14066 |
Unspecified |
| scaffold5462 |
1990 |
2020 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5462 |
2018 |
2579 |
+ |
PL503 |
Unspecified |
| scaffold5462 |
3891 |
3947 |
+ |
A-rich |
Low_complexity |
| scaffold5462 |
4346 |
4365 |
+ |
(ATG)n |
Simple_repeat |
| scaffold5462 |
4456 |
4488 |
+ |
A-rich |
Low_complexity |
| scaffold5462 |
4500 |
4673 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold5462 |
5857 |
5900 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5462 |
5958 |
6040 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5462 |
6085 |
6331 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5462 |
6085 |
6236 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5462 |
6180 |
6331 |
+ |
RS1323 |
Unspecified |
| scaffold5462 |
6971 |
7150 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold5462 |
6991 |
7083 |
+ |
LINE1-7_SBi |
LINE/L1 |
| scaffold5462 |
7238 |
7419 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold5462 |
7486 |
7510 |
+ |
(T)n |
Simple_repeat |
| scaffold5462 |
7516 |
7560 |
+ |
LINE1G_MT |
LINE/L1 |
| scaffold5462 |
8746 |
9741 |
+ |
PL465 |
Unspecified |
| scaffold5462 |
10020 |
10120 |
+ |
A-rich |
Low_complexity |
| scaffold5462 |
11706 |
11790 |
+ |
Helitron-N10_SBi |
RC/Helitron |
| scaffold5462 |
19034 |
19252 |
- |
RS356 |
Unspecified |
| scaffold5462 |
19360 |
19387 |
+ |
(CCG)n |
Simple_repeat |
| scaffold5462 |
20066 |
20100 |
+ |
A-rich |
Low_complexity |
| scaffold5462 |
20139 |
20524 |
- |
RS783 |
Unspecified |
| scaffold5462 |
21252 |
21271 |
+ |
(T)n |
Simple_repeat |
| scaffold5462 |
21431 |
21661 |
+ |
RS18 |
Unspecified |
| scaffold5462 |
23476 |
23513 |
+ |
(TCAT)n |
Simple_repeat |
| scaffold5462 |
23515 |
23546 |
+ |
(TC)n |
Simple_repeat |
| scaffold5462 |
24803 |
25042 |
- |
RS860 |
Unspecified |
| scaffold5462 |
25980 |
26020 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold5462 |
26106 |
26139 |
+ |
(A)n |
Simple_repeat |
| scaffold5462 |
26350 |
26374 |
+ |
(T)n |
Simple_repeat |
| scaffold5462 |
26475 |
26553 |
+ |
(TA)n |
Simple_repeat |
| scaffold5462 |
26631 |
26756 |
- |
PL777 |
Unspecified |
| scaffold5462 |
26674 |
26834 |
- |
RS767 |
Unspecified |
| scaffold5462 |
26849 |
27174 |
- |
RS767 |
Unspecified |
| scaffold5462 |
27358 |
27591 |
+ |
PL130 |
Unspecified |
| scaffold5462 |
27881 |
27901 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold5462 |
28059 |
28092 |
+ |
(T)n |
Simple_repeat |
| scaffold5462 |
28216 |
28644 |
- |
PL352 |
Unspecified |
| scaffold5462 |
28657 |
28741 |
+ |
(ATTGTT)n |
Simple_repeat |
| scaffold5462 |
28705 |
28747 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold5462 |
28828 |
28947 |
+ |
RS11794 |
Unspecified |
| scaffold5462 |
29526 |
29560 |
+ |
(TTTAATA)n |
Simple_repeat |
| scaffold5462 |
37958 |
38046 |
- |
PL754 |
Unspecified |
| scaffold5462 |
38231 |
38275 |
+ |
(T)n |
Simple_repeat |
| scaffold5462 |
38979 |
39049 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5462 |
42888 |
43029 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5462 |
43177 |
43387 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5462 |
44652 |
44757 |
- |
RS10044 |
Unspecified |
| scaffold5462 |
44818 |
44983 |
- |
RS13655 |
Unspecified |
| scaffold5462 |
45319 |
45338 |
+ |
(TGA)n |
Simple_repeat |
| scaffold5462 |
45471 |
45519 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold5462 |
45607 |
45655 |
+ |
(TGTTTTG)n |
Simple_repeat |
| scaffold5462 |
45709 |
45787 |
+ |
G-rich |
Low_complexity |
| scaffold5462 |
45893 |
45975 |
+ |
RS16382 |
Unspecified |
| scaffold5462 |
45975 |
46034 |
+ |
RS16382 |
Unspecified |
| scaffold5462 |
45982 |
46043 |
- |
RS4475 |
Unspecified |
| scaffold5462 |
46149 |
46243 |
+ |
RS13324 |
Unspecified |
| scaffold5462 |
46452 |
46460 |
+ |
(CATA)n |
Simple_repeat |
| scaffold5462 |
46461 |
46496 |
+ |
(ATACAT)n |
Simple_repeat |
| scaffold5462 |
46497 |
46505 |
+ |
(CATA)n |
Simple_repeat |
| scaffold5462 |
46553 |
46597 |
+ |
(AGTTGTTGT)n |
Simple_repeat |
| scaffold5462 |
46895 |
47108 |
- |
RS1349 |
Unspecified |
| scaffold5462 |
47851 |
47925 |
+ |
RS6823 |
Unspecified |
| scaffold5462 |
50741 |
50759 |
+ |
(T)n |
Simple_repeat |
| scaffold5462 |
51027 |
51065 |
+ |
A-rich |
Low_complexity |
| scaffold5462 |
51679 |
51719 |
+ |
(CCCCG)n |
Simple_repeat |
| scaffold5462 |
51679 |
51825 |
+ |
(CCCCG)n |
Simple_repeat |
| scaffold5462 |
51704 |
51825 |
- |
PL819 |
Unspecified |
| scaffold5462 |
51954 |
52055 |
+ |
RS1167 |
Unspecified |
| scaffold5462 |
52186 |
52405 |
+ |
RS537 |
Unspecified |
| scaffold5462 |
52412 |
52443 |
+ |
A-rich |
Low_complexity |
| scaffold5462 |
53741 |
53844 |
- |
RS14507 |
Unspecified |
| scaffold5462 |
54386 |
54417 |
+ |
(T)n |
Simple_repeat |
| scaffold5462 |
54788 |
55028 |
+ |
RS193 |
Unspecified |
| scaffold5462 |
55267 |
55304 |
- |
RS15179 |
Unspecified |
| scaffold5462 |
55272 |
55313 |
+ |
RS178 |
Unspecified |
| scaffold5462 |
55327 |
55440 |
- |
RS15179 |
Unspecified |
| scaffold5462 |
55344 |
55523 |
- |
RS79 |
Unspecified |
| scaffold5462 |
55470 |
55539 |
+ |
RS18066 |
Unspecified |
| scaffold5462 |
56530 |
57928 |
- |
RS51 |
Unspecified |
| scaffold5462 |
59372 |
59475 |
- |
RS14507 |
Unspecified |
| scaffold5462 |
61580 |
61613 |
+ |
(A)n |
Simple_repeat |
| scaffold5462 |
62498 |
62557 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5462 |
62857 |
62908 |
+ |
A-rich |
Low_complexity |
| scaffold5462 |
63464 |
63514 |
+ |
(TTCAT)n |
Simple_repeat |
| scaffold5462 |
64176 |
64343 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5462 |
64265 |
64343 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold5462 |
64574 |
64720 |
+ |
RS8587 |
Unspecified |
| scaffold5462 |
64768 |
64873 |
- |
RS41 |
Unspecified |
| scaffold5462 |
64874 |
64975 |
- |
RS17243 |
Unspecified |
| scaffold5462 |
65543 |
65573 |
+ |
(AATTCT)n |
Simple_repeat |