scaffold5499 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5499 |
111 |
2294 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold5499 |
2498 |
3737 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold5499 |
3734 |
4826 |
+ |
PL403 |
Unspecified |
| scaffold5499 |
3754 |
5037 |
- |
RS443 |
Unspecified |
| scaffold5499 |
4823 |
5583 |
+ |
RS2123 |
Unspecified |
| scaffold5499 |
5838 |
5864 |
+ |
(CTTG)n |
Simple_repeat |
| scaffold5499 |
6190 |
6206 |
+ |
(T)n |
Simple_repeat |
| scaffold5499 |
6229 |
6890 |
+ |
RS67 |
Unspecified |
| scaffold5499 |
6412 |
6991 |
+ |
RS67 |
Unspecified |
| scaffold5499 |
8073 |
9706 |
+ |
(TTTGCC)n |
Simple_repeat |
| scaffold5499 |
9673 |
9706 |
+ |
(TTTGCC)n |
Simple_repeat |
| scaffold5499 |
10697 |
10745 |
+ |
GA-rich |
Low_complexity |
| scaffold5499 |
11795 |
11955 |
- |
RS572 |
Unspecified |
| scaffold5499 |
12837 |
12885 |
+ |
GA-rich |
Low_complexity |
| scaffold5499 |
14974 |
16406 |
+ |
RS1686 |
Unspecified |
| scaffold5499 |
16856 |
18038 |
+ |
RS122 |
Unspecified |
| scaffold5499 |
17784 |
18479 |
+ |
RS122 |
Unspecified |
| scaffold5499 |
18540 |
19317 |
+ |
RS122 |
Unspecified |
| scaffold5499 |
19065 |
19759 |
+ |
RS122 |
Unspecified |
| scaffold5499 |
19114 |
19199 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold5499 |
20252 |
20694 |
+ |
PL910 |
Unspecified |
| scaffold5499 |
21212 |
21271 |
+ |
(TGTTGTT)n |
Simple_repeat |
| scaffold5499 |
21494 |
21587 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold5499 |
21778 |
22884 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold5499 |
23137 |
23493 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5499 |
23640 |
24926 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5499 |
25953 |
26058 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5499 |
26576 |
26612 |
+ |
(GTTGTA)n |
Simple_repeat |
| scaffold5499 |
26576 |
26897 |
+ |
(GTTGTA)n |
Simple_repeat |
| scaffold5499 |
26605 |
26897 |
- |
RS11094 |
Unspecified |
| scaffold5499 |
27064 |
27161 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5499 |
27910 |
29409 |
- |
RS3148 |
Unspecified |
| scaffold5499 |
29696 |
30793 |
+ |
PL403 |
Unspecified |
| scaffold5499 |
29717 |
30964 |
- |
RS443 |
Unspecified |
| scaffold5499 |
31454 |
31732 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold5499 |
31515 |
31732 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold5499 |
31735 |
32394 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold5499 |
32392 |
33879 |
+ |
RS482 |
Unspecified |
| scaffold5499 |
32790 |
33689 |
- |
RS3808 |
Unspecified |
| scaffold5499 |
35230 |
35517 |
- |
RS146 |
Unspecified |
| scaffold5499 |
35580 |
35799 |
+ |
RS35 |
Unspecified |
| scaffold5499 |
36343 |
36425 |
+ |
(GAT)n |
Simple_repeat |
| scaffold5499 |
36533 |
36559 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold5499 |
36682 |
36728 |
+ |
(AGGACA)n |
Simple_repeat |
| scaffold5499 |
36792 |
36838 |
+ |
(AGAATC)n |
Simple_repeat |
| scaffold5499 |
37848 |
38118 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold5499 |
38191 |
38421 |
- |
RS4187 |
Unspecified |
| scaffold5499 |
38344 |
38663 |
- |
RS1152 |
Unspecified |
| scaffold5499 |
38966 |
39002 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5499 |
39604 |
39648 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5499 |
39823 |
40359 |
- |
RS132 |
Unspecified |
| scaffold5499 |
40453 |
40514 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5499 |
40619 |
40646 |
+ |
(A)n |
Simple_repeat |
| scaffold5499 |
43772 |
45270 |
- |
Copia-25_BRa-I |
LTR/Copia |
| scaffold5499 |
45821 |
45868 |
- |
Copia-25_BRa-I |
LTR/Copia |
| scaffold5499 |
45981 |
46464 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold5499 |
48977 |
49188 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold5499 |
49632 |
49795 |
+ |
RS480 |
Unspecified |
| scaffold5499 |
49796 |
50142 |
+ |
RS2881 |
Unspecified |
| scaffold5499 |
50372 |
50439 |
+ |
A-rich |
Low_complexity |
| scaffold5499 |
50772 |
50867 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold5499 |
51040 |
51087 |
+ |
(TTATTT)n |
Simple_repeat |