scaffold5527 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5527 |
1 |
549 |
- |
RS732 |
Unspecified |
| scaffold5527 |
116 |
795 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold5527 |
740 |
795 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold5527 |
1454 |
1686 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold5527 |
2498 |
2558 |
- |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold5527 |
3586 |
4077 |
+ |
PL111 |
Unspecified |
| scaffold5527 |
6832 |
6910 |
+ |
(TATG)n |
Simple_repeat |
| scaffold5527 |
7432 |
7474 |
+ |
(TTTGTC)n |
Simple_repeat |
| scaffold5527 |
7860 |
8916 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5527 |
9222 |
9595 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold5527 |
9663 |
11142 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5527 |
11212 |
11278 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold5527 |
11459 |
11482 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5527 |
11493 |
11568 |
+ |
(GAGCTGCTT)n |
Simple_repeat |
| scaffold5527 |
11493 |
12335 |
+ |
(GAGCTGCTT)n |
Simple_repeat |
| scaffold5527 |
11533 |
12335 |
+ |
RS3631 |
Unspecified |
| scaffold5527 |
12514 |
12596 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold5527 |
13506 |
14507 |
+ |
PL956 |
Unspecified |
| scaffold5527 |
18080 |
18120 |
+ |
A-rich |
Low_complexity |
| scaffold5527 |
19336 |
19791 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold5527 |
19562 |
20150 |
- |
PL166 |
Unspecified |
| scaffold5527 |
22381 |
22457 |
- |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold5527 |
22512 |
22542 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold5527 |
22563 |
22884 |
+ |
PL787 |
Unspecified |
| scaffold5527 |
23810 |
23856 |
+ |
(TTACTTA)n |
Simple_repeat |
| scaffold5527 |
24052 |
24119 |
+ |
(TTTCAATA)n |
Simple_repeat |
| scaffold5527 |
24094 |
24132 |
+ |
(ATTTGAA)n |
Simple_repeat |
| scaffold5527 |
24276 |
24477 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5527 |
24890 |
24953 |
+ |
(ATTATTA)n |
Simple_repeat |
| scaffold5527 |
25233 |
25315 |
+ |
A-rich |
Low_complexity |
| scaffold5527 |
25476 |
25509 |
+ |
A-rich |
Low_complexity |
| scaffold5527 |
26960 |
27221 |
+ |
RS898 |
Unspecified |
| scaffold5527 |
27249 |
27292 |
+ |
A-rich |
Low_complexity |
| scaffold5527 |
28614 |
28643 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5527 |
30475 |
30518 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold5527 |
31105 |
31177 |
- |
EnSpm-11_ZM |
DNA/CMC-EnSpm |
| scaffold5527 |
32217 |
32298 |
+ |
A-rich |
Low_complexity |
| scaffold5527 |
32605 |
32651 |
+ |
(AATCTT)n |
Simple_repeat |
| scaffold5527 |
34183 |
34224 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold5527 |
34736 |
34834 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5527 |
34859 |
34917 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5527 |
35597 |
35666 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold5527 |
36016 |
36731 |
- |
PL730 |
Unspecified |
| scaffold5527 |
36739 |
36782 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5527 |
37161 |
37237 |
+ |
(CATCTT)n |
Simple_repeat |
| scaffold5527 |
37193 |
37255 |
+ |
(TCT)n |
Simple_repeat |
| scaffold5527 |
37676 |
37718 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold5527 |
38392 |
38425 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold5527 |
38719 |
38774 |
+ |
(TTTTAGT)n |
Simple_repeat |
| scaffold5527 |
39337 |
39404 |
+ |
A-rich |
Low_complexity |
| scaffold5527 |
39337 |
40017 |
+ |
A-rich |
Low_complexity |
| scaffold5527 |
39392 |
40017 |
- |
PL39 |
Unspecified |
| scaffold5527 |
41209 |
41566 |
- |
RS5093 |
Unspecified |
| scaffold5527 |
41507 |
41577 |
+ |
PL139 |
Unspecified |
| scaffold5527 |
41874 |
42015 |
- |
SHACOP15_LTR_MT |
LTR/Copia |
| scaffold5527 |
45280 |
45529 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold5527 |
46993 |
47297 |
+ |
PL444 |
Unspecified |
| scaffold5527 |
47353 |
47447 |
+ |
(TAGAATT)n |
Simple_repeat |
| scaffold5527 |
47811 |
47900 |
+ |
(AATTTGT)n |
Simple_repeat |
| scaffold5527 |
49289 |
49478 |
- |
RS265 |
Unspecified |
| scaffold5527 |
49479 |
49903 |
- |
PL578 |
Unspecified |