scaffold5554 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5554 |
34 |
126 |
+ |
G-rich |
Low_complexity |
| scaffold5554 |
142 |
364 |
+ |
RS4 |
Unspecified |
| scaffold5554 |
361 |
441 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5554 |
712 |
904 |
+ |
RS163 |
Unspecified |
| scaffold5554 |
753 |
1231 |
+ |
PL306 |
Unspecified |
| scaffold5554 |
1246 |
1279 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5554 |
1915 |
2002 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5554 |
2428 |
2588 |
+ |
RS1253 |
Unspecified |
| scaffold5554 |
3056 |
3100 |
+ |
A-rich |
Low_complexity |
| scaffold5554 |
4176 |
5126 |
+ |
L1-15_GM |
LINE/L1 |
| scaffold5554 |
5628 |
6158 |
+ |
RS3091 |
Unspecified |
| scaffold5554 |
5798 |
6689 |
- |
PL532 |
Unspecified |
| scaffold5554 |
6803 |
6841 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5554 |
7040 |
7071 |
+ |
(TTTTATTT)n |
Simple_repeat |
| scaffold5554 |
7040 |
7188 |
+ |
(TTTTATTT)n |
Simple_repeat |
| scaffold5554 |
7057 |
7188 |
- |
RS17927 |
Unspecified |
| scaffold5554 |
7588 |
7685 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5554 |
7974 |
8475 |
+ |
PL448 |
Unspecified |
| scaffold5554 |
8476 |
8953 |
+ |
RS4748 |
Unspecified |
| scaffold5554 |
9964 |
10068 |
+ |
RS3708 |
Unspecified |
| scaffold5554 |
10042 |
10198 |
- |
RS2290 |
Unspecified |
| scaffold5554 |
10083 |
10428 |
+ |
RS3708 |
Unspecified |
| scaffold5554 |
10429 |
10522 |
- |
RS3897 |
Unspecified |
| scaffold5554 |
10524 |
10869 |
+ |
RS3708 |
Unspecified |
| scaffold5554 |
11284 |
11328 |
+ |
(AATAATA)n |
Simple_repeat |
| scaffold5554 |
11375 |
11414 |
+ |
A-rich |
Low_complexity |
| scaffold5554 |
11665 |
11803 |
+ |
RS948 |
Unspecified |
| scaffold5554 |
11879 |
12349 |
+ |
RS8565 |
Unspecified |
| scaffold5554 |
16668 |
16943 |
- |
RS10420 |
Unspecified |
| scaffold5554 |
16851 |
16985 |
- |
RS11293 |
Unspecified |
| scaffold5554 |
17726 |
17764 |
+ |
GA-rich |
Low_complexity |
| scaffold5554 |
18000 |
18044 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold5554 |
18301 |
18343 |
+ |
(TCAT)n |
Simple_repeat |
| scaffold5554 |
18417 |
18552 |
- |
RS2414 |
Unspecified |
| scaffold5554 |
18683 |
18743 |
+ |
ATHAT10 |
DNA/hAT-Ac |
| scaffold5554 |
19926 |
20770 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5554 |
21085 |
21129 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold5554 |
23367 |
23394 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
24108 |
24330 |
- |
RS6481 |
Unspecified |
| scaffold5554 |
24229 |
24346 |
- |
RS15618 |
Unspecified |
| scaffold5554 |
24380 |
24629 |
+ |
(CTG)n |
Simple_repeat |
| scaffold5554 |
24973 |
25083 |
+ |
RS12840 |
Unspecified |
| scaffold5554 |
26104 |
26261 |
+ |
RS2987 |
Unspecified |
| scaffold5554 |
27481 |
27603 |
+ |
RS5740 |
Unspecified |
| scaffold5554 |
28054 |
28086 |
+ |
(A)n |
Simple_repeat |
| scaffold5554 |
28109 |
28138 |
+ |
(TA)n |
Simple_repeat |
| scaffold5554 |
29141 |
29159 |
+ |
(TGAGGA)n |
Simple_repeat |
| scaffold5554 |
29160 |
29239 |
+ |
(GAT)n |
Simple_repeat |
| scaffold5554 |
29433 |
29577 |
+ |
RS10407 |
Unspecified |
| scaffold5554 |
29570 |
29724 |
+ |
RS9963 |
Unspecified |
| scaffold5554 |
30273 |
30533 |
- |
RS12851 |
Unspecified |
| scaffold5554 |
30790 |
30841 |
+ |
(ATGTGTC)n |
Simple_repeat |
| scaffold5554 |
31566 |
31927 |
+ |
RS14275 |
Unspecified |
| scaffold5554 |
31995 |
32119 |
+ |
RS12624 |
Unspecified |
| scaffold5554 |
33101 |
33330 |
- |
RS9707 |
Unspecified |
| scaffold5554 |
33702 |
33731 |
+ |
Gypsy-206_ZM-I |
LTR/Gypsy |
| scaffold5554 |
33962 |
34169 |
- |
RS6444 |
Unspecified |
| scaffold5554 |
34205 |
34228 |
+ |
(AGAA)n |
Simple_repeat |
| scaffold5554 |
34259 |
34404 |
+ |
RS7425 |
Unspecified |
| scaffold5554 |
34390 |
34643 |
+ |
RS12522 |
Unspecified |
| scaffold5554 |
35174 |
35201 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5554 |
36330 |
36354 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5554 |
36840 |
36902 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
36962 |
37039 |
+ |
(TTTGTTA)n |
Simple_repeat |
| scaffold5554 |
39700 |
39758 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold5554 |
39839 |
39920 |
- |
RS6477 |
Unspecified |
| scaffold5554 |
42612 |
42664 |
+ |
(A)n |
Simple_repeat |
| scaffold5554 |
43873 |
43930 |
+ |
(A)n |
Simple_repeat |
| scaffold5554 |
44055 |
44073 |
+ |
(A)n |
Simple_repeat |
| scaffold5554 |
44204 |
44241 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold5554 |
44901 |
44923 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
45166 |
45200 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
47146 |
47178 |
+ |
(AATTGG)n |
Simple_repeat |
| scaffold5554 |
47343 |
47372 |
+ |
(A)n |
Simple_repeat |
| scaffold5554 |
47437 |
47502 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5554 |
47790 |
47813 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5554 |
47842 |
47895 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5554 |
48055 |
48231 |
+ |
RS7095 |
Unspecified |
| scaffold5554 |
48237 |
48255 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5554 |
50470 |
50499 |
+ |
A-rich |
Low_complexity |
| scaffold5554 |
50547 |
50702 |
+ |
RS782 |
Unspecified |
| scaffold5554 |
52484 |
52512 |
+ |
(AG)n |
Simple_repeat |
| scaffold5554 |
52626 |
52677 |
+ |
(TTTTAAT)n |
Simple_repeat |
| scaffold5554 |
53423 |
53622 |
+ |
RS4 |
Unspecified |
| scaffold5554 |
55246 |
55369 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5554 |
55370 |
55446 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5554 |
56478 |
56831 |
- |
RS2390 |
Unspecified |
| scaffold5554 |
57011 |
57049 |
+ |
A-rich |
Low_complexity |
| scaffold5554 |
57502 |
57530 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
57642 |
57663 |
+ |
(AATC)n |
Simple_repeat |
| scaffold5554 |
58017 |
58040 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5554 |
58335 |
58368 |
+ |
A-rich |
Low_complexity |
| scaffold5554 |
58774 |
58983 |
+ |
RS981 |
Unspecified |
| scaffold5554 |
58797 |
58982 |
+ |
RS904 |
Unspecified |
| scaffold5554 |
59571 |
59620 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
59765 |
59800 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
60895 |
60924 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
65589 |
65621 |
+ |
(AATCAG)n |
Simple_repeat |
| scaffold5554 |
65955 |
65977 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
66068 |
66506 |
- |
PL272 |
Unspecified |
| scaffold5554 |
66599 |
66765 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5554 |
66930 |
67036 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold5554 |
67190 |
67230 |
+ |
(TATTATT)n |
Simple_repeat |
| scaffold5554 |
67271 |
67355 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold5554 |
67489 |
67542 |
+ |
(TATATTT)n |
Simple_repeat |
| scaffold5554 |
68702 |
68727 |
+ |
(CA)n |
Simple_repeat |
| scaffold5554 |
69747 |
69795 |
+ |
A-rich |
Low_complexity |
| scaffold5554 |
69791 |
70074 |
+ |
RS2997 |
Unspecified |
| scaffold5554 |
70106 |
70165 |
+ |
A-rich |
Low_complexity |
| scaffold5554 |
70673 |
70714 |
+ |
(ATCAACA)n |
Simple_repeat |
| scaffold5554 |
71040 |
71123 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold5554 |
72527 |
72591 |
+ |
(GGTGAT)n |
Simple_repeat |
| scaffold5554 |
72965 |
72994 |
+ |
(T)n |
Simple_repeat |
| scaffold5554 |
73130 |
73360 |
- |
Sat-1_CPa |
Satellite |
| scaffold5554 |
73275 |
73360 |
- |
Sat-1_CPa |
Satellite |
| scaffold5554 |
73288 |
73370 |
- |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold5554 |
73364 |
73575 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold5554 |
73492 |
73585 |
+ |
T-rich |
Low_complexity |
| scaffold5554 |
74106 |
74748 |
- |
RS257 |
Unspecified |
| scaffold5554 |
75307 |
75341 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold5554 |
75490 |
75558 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5554 |
76634 |
76696 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5554 |
76911 |
76947 |
+ |
(A)n |
Simple_repeat |
| scaffold5554 |
76964 |
77450 |
- |
PL637 |
Unspecified |
| scaffold5554 |
78569 |
78616 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5554 |
78619 |
78648 |
+ |
(TTAAA)n |
Simple_repeat |
| scaffold5554 |
78870 |
79041 |
- |
PL352 |
Unspecified |
| scaffold5554 |
79096 |
79150 |
+ |
(TAAATTAAGC)n |
Simple_repeat |
| scaffold5554 |
80443 |
81024 |
- |
RS1133 |
Unspecified |
| scaffold5554 |
81102 |
81129 |
+ |
(TA)n |
Simple_repeat |
| scaffold5554 |
81669 |
81697 |
+ |
(A)n |
Simple_repeat |
| scaffold5554 |
81828 |
82141 |
+ |
RS726 |
Unspecified |
| scaffold5554 |
82904 |
83440 |
- |
PL22 |
Unspecified |
| scaffold5554 |
84034 |
84076 |
+ |
STOWAWAY20_SB |
DNA/TcMar-Stowaway |
| scaffold5554 |
84586 |
84694 |
- |
PL904 |
Unspecified |