scaffold5556 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold5556 |
3 |
183 |
- |
PL547 |
Unspecified |
scaffold5556 |
672 |
822 |
+ |
RS620 |
Unspecified |
scaffold5556 |
826 |
980 |
- |
RS459 |
Unspecified |
scaffold5556 |
5902 |
5928 |
+ |
(AAATA)n |
Simple_repeat |
scaffold5556 |
10948 |
11083 |
+ |
RS425 |
Unspecified |
scaffold5556 |
11081 |
11260 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
scaffold5556 |
11221 |
11260 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
scaffold5556 |
11394 |
11448 |
+ |
(GTCAAG)n |
Simple_repeat |
scaffold5556 |
11682 |
11787 |
- |
RS4475 |
Unspecified |
scaffold5556 |
13511 |
13544 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
13983 |
14037 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
15552 |
15579 |
+ |
(AATAA)n |
Simple_repeat |
scaffold5556 |
15762 |
16201 |
+ |
RS338 |
Unspecified |
scaffold5556 |
16202 |
16365 |
+ |
RS275 |
Unspecified |
scaffold5556 |
17082 |
17314 |
- |
RS4 |
Unspecified |
scaffold5556 |
17319 |
17425 |
- |
RS575 |
Unspecified |
scaffold5556 |
18291 |
18744 |
- |
RS4632 |
Unspecified |
scaffold5556 |
18484 |
19495 |
+ |
RS7544 |
Unspecified |
scaffold5556 |
19515 |
19546 |
+ |
(TATTAA)n |
Simple_repeat |
scaffold5556 |
21602 |
21627 |
+ |
(TTGGA)n |
Simple_repeat |
scaffold5556 |
22075 |
22108 |
+ |
(GATCAT)n |
Simple_repeat |
scaffold5556 |
22646 |
22746 |
+ |
RS16300 |
Unspecified |
scaffold5556 |
23336 |
23454 |
+ |
RS16280 |
Unspecified |
scaffold5556 |
24574 |
24720 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
27414 |
27469 |
- |
PL737 |
Unspecified |
scaffold5556 |
27425 |
27476 |
+ |
PL613 |
Unspecified |
scaffold5556 |
27580 |
27611 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
28782 |
28877 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
29309 |
29573 |
- |
RS10 |
Unspecified |
scaffold5556 |
29847 |
30068 |
+ |
RS2696 |
Unspecified |
scaffold5556 |
30126 |
30156 |
+ |
(AATCA)n |
Simple_repeat |
scaffold5556 |
30960 |
31118 |
+ |
RS387 |
Unspecified |
scaffold5556 |
31272 |
31424 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
31913 |
31952 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
32240 |
32256 |
+ |
(A)n |
Simple_repeat |
scaffold5556 |
33287 |
33431 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
33747 |
33888 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
35589 |
35686 |
- |
RS11998 |
Unspecified |
scaffold5556 |
35938 |
36070 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold5556 |
37212 |
37355 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
38009 |
38042 |
+ |
(TATTT)n |
Simple_repeat |
scaffold5556 |
38053 |
38229 |
- |
PL640 |
Unspecified |
scaffold5556 |
38231 |
38274 |
+ |
(TTTGA)n |
Simple_repeat |
scaffold5556 |
40405 |
40551 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
41516 |
41580 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
41752 |
41780 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
42822 |
42968 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
43745 |
43771 |
+ |
(A)n |
Simple_repeat |
scaffold5556 |
44332 |
44372 |
+ |
(AAGAAC)n |
Simple_repeat |
scaffold5556 |
45101 |
45143 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
45773 |
45816 |
+ |
(ATTATAC)n |
Simple_repeat |
scaffold5556 |
47449 |
47531 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
scaffold5556 |
47960 |
48061 |
+ |
PL769 |
Unspecified |
scaffold5556 |
48202 |
48318 |
+ |
RS45 |
Unspecified |
scaffold5556 |
48606 |
48671 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
48758 |
48864 |
- |
RS7775 |
Unspecified |
scaffold5556 |
49153 |
49188 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
49255 |
49291 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
49409 |
49644 |
- |
RS2135 |
Unspecified |
scaffold5556 |
49607 |
49711 |
+ |
RS3564 |
Unspecified |
scaffold5556 |
49959 |
49975 |
+ |
(A)n |
Simple_repeat |
scaffold5556 |
51398 |
51544 |
+ |
RS14229 |
Unspecified |
scaffold5556 |
52475 |
52513 |
+ |
(TGATT)n |
Simple_repeat |
scaffold5556 |
59249 |
59278 |
+ |
(A)n |
Simple_repeat |
scaffold5556 |
59706 |
59829 |
+ |
RS641 |
Unspecified |
scaffold5556 |
59912 |
60003 |
- |
RS641 |
Unspecified |
scaffold5556 |
60048 |
60068 |
+ |
(A)n |
Simple_repeat |
scaffold5556 |
60201 |
60439 |
- |
RS581 |
Unspecified |
scaffold5556 |
60671 |
60742 |
- |
STOWAWAY14_SB |
DNA/TcMar-Stowaway |
scaffold5556 |
60743 |
60817 |
+ |
RS133 |
Unspecified |
scaffold5556 |
61074 |
61368 |
- |
RS574 |
Unspecified |
scaffold5556 |
61755 |
61810 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
62281 |
62427 |
+ |
RS5090 |
Unspecified |
scaffold5556 |
62738 |
62771 |
+ |
(AAT)n |
Simple_repeat |
scaffold5556 |
62804 |
62930 |
+ |
RS1172 |
Unspecified |
scaffold5556 |
62818 |
62979 |
- |
RS11189 |
Unspecified |
scaffold5556 |
63438 |
63478 |
+ |
(ATATTTA)n |
Simple_repeat |
scaffold5556 |
63783 |
63915 |
+ |
RS356 |
Unspecified |
scaffold5556 |
64316 |
64336 |
+ |
(T)n |
Simple_repeat |
scaffold5556 |
64658 |
64829 |
+ |
RS179 |
Unspecified |
scaffold5556 |
64853 |
64881 |
+ |
(CGACC)n |
Simple_repeat |
scaffold5556 |
65323 |
65407 |
+ |
(GACCC)n |
Simple_repeat |
scaffold5556 |
66764 |
66905 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
scaffold5556 |
67030 |
67261 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold5556 |
67195 |
67261 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold5556 |
67493 |
67563 |
+ |
A-rich |
Low_complexity |
scaffold5556 |
67574 |
67631 |
+ |
(TTGAGAT)n |
Simple_repeat |
scaffold5556 |
67761 |
67793 |
+ |
(T)n |
Simple_repeat |
scaffold5556 |
68076 |
68224 |
- |
RS178 |
Unspecified |
scaffold5556 |
68362 |
68709 |
+ |
RS42 |
Unspecified |
scaffold5556 |
68849 |
68872 |
+ |
(T)n |
Simple_repeat |
scaffold5556 |
68901 |
69091 |
- |
RS4 |
Unspecified |
scaffold5556 |
69104 |
69140 |
+ |
(T)n |
Simple_repeat |
scaffold5556 |
69610 |
69649 |
+ |
(T)n |
Simple_repeat |
scaffold5556 |
69650 |
69678 |
+ |
(TTTTAT)n |
Simple_repeat |
scaffold5556 |
69915 |
70012 |
- |
RS16911 |
Unspecified |
scaffold5556 |
75971 |
76006 |
+ |
(GATTT)n |
Simple_repeat |
scaffold5556 |
76807 |
76830 |
+ |
(TCC)n |
Simple_repeat |
scaffold5556 |
77512 |
77590 |
+ |
RS7221 |
Unspecified |
scaffold5556 |
77736 |
77768 |
+ |
(A)n |
Simple_repeat |
scaffold5556 |
77826 |
77914 |
- |
RS9692 |
Unspecified |
scaffold5556 |
78345 |
78445 |
+ |
RS17947 |
Unspecified |
scaffold5556 |
78428 |
78484 |
+ |
RS17947 |
Unspecified |
scaffold5556 |
78864 |
78951 |
- |
RS18078 |
Unspecified |
scaffold5556 |
79110 |
79250 |
+ |
RS8232 |
Unspecified |
scaffold5556 |
79277 |
79442 |
+ |
RS10375 |
Unspecified |
scaffold5556 |
80259 |
80584 |
+ |
RS7221 |
Unspecified |
scaffold5556 |
81047 |
81121 |
+ |
RS17947 |
Unspecified |
scaffold5556 |
81378 |
81408 |
+ |
(ATAATT)n |
Simple_repeat |
scaffold5556 |
81413 |
81510 |
+ |
RS972 |
Unspecified |
scaffold5556 |
81587 |
81620 |
+ |
(TTAA)n |
Simple_repeat |
scaffold5556 |
81784 |
81923 |
+ |
RS8232 |
Unspecified |