| genome | start | end | strand | repeat-name | repeat-class |
|---|---|---|---|---|---|
| scaffold8643 | 766 | 858 | - | RS750 | Unspecified |
| scaffold8643 | 1336 | 1555 | + | RS16888 | Unspecified |
| scaffold8643 | 3008 | 3040 | + | A-rich | Low_complexity |
| scaffold8643 | 4561 | 4582 | + | (A)n | Simple_repeat |
| scaffold8643 | 6494 | 6676 | + | RS179 | Unspecified |
| scaffold8643 | 7301 | 7362 | + | (A)n | Simple_repeat |
| scaffold8643 | 7690 | 7719 | + | A-rich | Low_complexity |
| scaffold8643 | 7990 | 8077 | - | RS18 | Unspecified |
| scaffold8643 | 8076 | 8323 | + | RS581 | Unspecified |
| scaffold8643 | 8318 | 8466 | - | RS18 | Unspecified |
| scaffold8643 | 8799 | 9511 | - | PL956 | Unspecified |
| scaffold8643 | 8824 | 8842 | + | (T)n | Simple_repeat |
| scaffold8643 | 8952 | 9134 | - | RS79 | Unspecified |
| scaffold8643 | 9977 | 10017 | + | (TCAC)n | Simple_repeat |
| scaffold8643 | 10084 | 10125 | + | (CGA)n | Simple_repeat |
| scaffold8643 | 10278 | 10298 | + | (CCT)n | Simple_repeat |
| scaffold8643 | 10389 | 10424 | + | (TTTTAA)n | Simple_repeat |
| scaffold8643 | 14082 | 14115 | + | GA-rich | Low_complexity |
| scaffold8643 | 14533 | 14570 | + | (AACTG)n | Simple_repeat |
| scaffold8643 | 14752 | 14787 | + | (TTA)n | Simple_repeat |
| scaffold8643 | 15060 | 15120 | + | (ATGAA)n | Simple_repeat |
| scaffold8643 | 15774 | 16172 | + | PL565 | Unspecified |
| scaffold8643 | 16825 | 17086 | + | RS365 | Unspecified |
| scaffold8643 | 17856 | 18015 | + | RS178 | Unspecified |
| scaffold8643 | 18259 | 18283 | + | (AAATT)n | Simple_repeat |
| scaffold8643 | 18496 | 18543 | + | (AT)n | Simple_repeat |
| scaffold8643 | 19146 | 19181 | + | (TTA)n | Simple_repeat |
| scaffold8643 | 19313 | 19349 | + | (TTTTGTT)n | Simple_repeat |
| scaffold8643 | 19332 | 19354 | + | (T)n | Simple_repeat |
| scaffold8643 | 19596 | 19664 | + | (TAA)n | Simple_repeat |
| scaffold8643 | 19816 | 19849 | + | (TAT)n | Simple_repeat |
| scaffold8643 | 19930 | 19966 | + | (ATAAT)n | Simple_repeat |
| scaffold8643 | 20536 | 20590 | + | A-rich | Low_complexity |
| scaffold8643 | 20686 | 20887 | + | RS4788 | Unspecified |
| scaffold8643 | 20954 | 21006 | + | A-rich | Low_complexity |
| scaffold8643 | 21135 | 21228 | + | RS16382 | Unspecified |
| scaffold8643 | 23088 | 23347 | - | RS26 | Unspecified |
| scaffold8643 | 23428 | 23465 | + | (GTAGAAG)n | Simple_repeat |
| scaffold8643 | 25017 | 25061 | + | A-rich | Low_complexity |
| scaffold8643 | 25639 | 25705 | + | A-rich | Low_complexity |
| scaffold8643 | 25803 | 25832 | + | (A)n | Simple_repeat |
| scaffold8643 | 26134 | 26376 | - | RS4 | Unspecified |
| scaffold8643 | 26235 | 26409 | - | RS6841 | Unspecified |
| scaffold8643 | 26705 | 26748 | + | (T)n | Simple_repeat |
| scaffold8643 | 27015 | 27153 | - | RS2995 | Unspecified |
| scaffold8643 | 27315 | 27381 | + | (CACCACA)n | Simple_repeat |
| scaffold8643 | 27689 | 27750 | + | (CCT)n | Simple_repeat |
| scaffold8643 | 29255 | 29377 | + | RS10591 | Unspecified |
| scaffold8643 | 29346 | 30443 | + | RS940 | Unspecified |
| scaffold8643 | 30466 | 30542 | + | RS1975 | Unspecified |
| scaffold8643 | 30559 | 30645 | + | RS1975 | Unspecified |
| scaffold8643 | 30668 | 30734 | + | RS940 | Unspecified |
| scaffold8643 | 30680 | 30750 | + | RS1309 | Unspecified |
| scaffold8643 | 30751 | 30834 | + | RS1975 | Unspecified |
| scaffold8643 | 31109 | 31650 | + | RS1309 | Unspecified |
| scaffold8643 | 31193 | 31706 | + | RS12322 | Unspecified |
| scaffold8643 | 32103 | 32411 | - | MuDR_A_B | MuDR_A_B(TransposonPSI) |
| scaffold8643 | 32529 | 32573 | + | (ACAT)n | Simple_repeat |
| scaffold8643 | 32633 | 32684 | + | A-rich | Low_complexity |
| scaffold8643 | 32721 | 32997 | + | RS600 | Unspecified |
| scaffold8643 | 33120 | 33457 | - | MuDR-5_OS | DNA/MULE-MuDR |
| scaffold8643 | 33834 | 33886 | + | A-rich | Low_complexity |
| scaffold8643 | 34402 | 35157 | + | RS994 | Unspecified |
| scaffold8643 | 35304 | 35360 | + | (GGTCTG)n | Simple_repeat |
| scaffold8643 | 42512 | 42569 | + | (ACTAATG)n | Simple_repeat |
| scaffold8643 | 43452 | 43493 | + | (TAC)n | Simple_repeat |
| scaffold8643 | 44831 | 44921 | - | LT1_EPa | LTR? |
| scaffold8643 | 44955 | 45271 | + | PL622 | Unspecified |
| scaffold8643 | 45272 | 45469 | - | PL562 | Unspecified |
| scaffold8643 | 47195 | 47780 | + | RS1154 | Unspecified |
| scaffold8643 | 47347 | 47963 | - | PL936 | Unspecified |
| scaffold8643 | 47488 | 48025 | - | PL915 | Unspecified |
| scaffold8643 | 48049 | 48159 | - | PL143 | Unspecified |
| scaffold8643 | 48371 | 48410 | + | (TTCACTA)n | Simple_repeat |
| scaffold8643 | 48417 | 48535 | + | (TTATAC)n | Simple_repeat |
| scaffold8643 | 49119 | 49198 | + | (TTTA)n | Simple_repeat |
| scaffold8643 | 49280 | 49329 | + | (TTTTAGT)n | Simple_repeat |
| scaffold8643 | 49967 | 50003 | + | (TAT)n | Simple_repeat |
| scaffold8643 | 50701 | 50732 | + | A-rich | Low_complexity |
| scaffold8643 | 51621 | 51782 | - | RS3891 | Unspecified |
| scaffold8643 | 51817 | 51881 | - | RS3891 | Unspecified |
| scaffold8643 | 52620 | 52650 | + | (GTTG)n | Simple_repeat |
| scaffold8643 | 54282 | 54355 | + | RS12199 | Unspecified |
| scaffold8643 | 55248 | 55281 | + | (TGG)n | Simple_repeat |
| scaffold8643 | 55452 | 55479 | + | (TA)n | Simple_repeat |
| scaffold8643 | 58289 | 58565 | + | (TA)n | Simple_repeat |
| scaffold8643 | 58530 | 58565 | + | (TA)n | Simple_repeat |
| scaffold8643 | 58811 | 58835 | + | (TA)n | Simple_repeat |
| scaffold8643 | 60904 | 60977 | + | Gypsy-72-LTR_ZM | LTR/Gypsy |
| scaffold8643 | 60988 | 61049 | + | (CGTATTT)n | Simple_repeat |
| scaffold8643 | 61649 | 61723 | + | (TATT)n | Simple_repeat |
| scaffold8643 | 63084 | 63126 | + | (GAAGAT)n | Simple_repeat |
| scaffold8643 | 63205 | 63266 | + | (ATGTAGT)n | Simple_repeat |
| scaffold8643 | 63736 | 63788 | + | A-rich | Low_complexity |
| scaffold8643 | 64376 | 64491 | - | COPI1_LTR | LTR/Copia |
| scaffold8643 | 66748 | 66848 | + | RS11707 | Unspecified |
| scaffold8643 | 66927 | 67120 | + | RS9331 | Unspecified |
| scaffold8643 | 68418 | 68851 | + | PL133 | Unspecified |
| scaffold8643 | 68935 | 69373 | + | RS283 | Unspecified |
| scaffold8643 | 69757 | 69790 | + | (TAA)n | Simple_repeat |
| scaffold8643 | 70509 | 70586 | + | (ATCAACA)n | Simple_repeat |
| scaffold8643 | 71943 | 72181 | - | RS350 | Unspecified |
| scaffold8643 | 72281 | 72667 | + | VIHAT2 | DNA/hAT-Tag1 |
| scaffold8643 | 72752 | 73084 | + | hAT-10_VV | DNA/hAT-Tag1 |
| scaffold8643 | 73378 | 73654 | + | hAT-12_VVi | DNA/hAT-Tag1 |
| scaffold8643 | 74298 | 74491 | - | RS7231 | Unspecified |
| scaffold8643 | 74498 | 74731 | + | RS5020 | Unspecified |
| scaffold8643 | 74971 | 75056 | + | (CGAGAC)n | Simple_repeat |
| scaffold8643 | 77716 | 77793 | + | (A)n | Simple_repeat |
| scaffold8643 | 78832 | 78853 | + | (A)n | Simple_repeat |
| scaffold8643 | 78855 | 78879 | + | (AATA)n | Simple_repeat |
| scaffold8643 | 83668 | 83848 | + | RS509 | Unspecified |
| scaffold8643 | 85220 | 85255 | + | A-rich | Low_complexity |
| scaffold8643 | 85835 | 85879 | + | (TCA)n | Simple_repeat |
| scaffold8643 | 86867 | 86956 | + | (ACA)n | Simple_repeat |
| scaffold8643 | 86988 | 87161 | + | RS8078 | Unspecified |
| scaffold8643 | 87204 | 87586 | + | RS13486 | Unspecified |
| scaffold8643 | 87645 | 87678 | + | GA-rich | Low_complexity |
| scaffold8643 | 87687 | 87743 | + | (TGA)n | Simple_repeat |
| scaffold8643 | 87748 | 87828 | + | (AATG)n | Simple_repeat |
| scaffold8643 | 87813 | 87839 | + | (GAA)n | Simple_repeat |
| scaffold8643 | 87871 | 87983 | - | PL358 | Unspecified |
| scaffold8643 | 87980 | 88153 | + | RS1033 | Unspecified |
| scaffold8643 | 88153 | 88397 | + | RS13486 | Unspecified |
| scaffold8643 | 88453 | 88513 | + | CACTA_LP | DNA/CMC-EnSpm |
| scaffold8643 | 88463 | 88551 | + | (ATG)n | Simple_repeat |
| scaffold8643 | 89204 | 89322 | + | (ATG)n | Simple_repeat |
| scaffold8643 | 89453 | 89630 | + | PL948 | Unspecified |
| scaffold8643 | 92289 | 92682 | + | RS2033 | Unspecified |
| scaffold8643 | 92930 | 93043 | - | EnSpm-1_GM | DNA/CMC-EnSpm |
| scaffold8643 | 93308 | 93807 | + | RS14236 | Unspecified |
| scaffold8643 | 93882 | 94535 | + | MEGY-I_MT | LTR/Gypsy |
| scaffold8643 | 94538 | 94580 | + | (TTG)n | Simple_repeat |
| scaffold8643 | 94921 | 95461 | - | Gypsy-2_Pru-I | LTR/Gypsy |
| scaffold8643 | 95525 | 95811 | - | RS9975 | Unspecified |
| scaffold8643 | 95802 | 96706 | - | RS1565 | Unspecified |
| scaffold8643 | 96707 | 96861 | - | RS1367 | Unspecified |
| scaffold8643 | 97763 | 98784 | + | (T)n | Simple_repeat |
| scaffold8643 | 98713 | 98784 | + | (T)n | Simple_repeat |
| scaffold8643 | 99386 | 99870 | - | PREM3_ZM_I-int | LTR/Copia |
| scaffold8643 | 100078 | 101029 | - | Copia10-VV_I-int | LTR/Copia |
| scaffold8643 | 101480 | 102372 | - | Copia10-VV_I-int | LTR/Copia |
| scaffold8643 | 102539 | 102893 | - | COPIA-I_MT | LTR/Copia |
| scaffold8643 | 102963 | 104906 | - | TY1_Copia | TY1_Copia(TransposonPSI) |
| scaffold8643 | 103627 | 103693 | + | (CTTTCA)n | Simple_repeat |
| scaffold8643 | 104143 | 104315 | - | COPIA-I_MT | LTR/Copia |
| scaffold8643 | 104383 | 104474 | - | COPIA-I_MT | LTR/Copia |
| scaffold8643 | 105069 | 105970 | - | RS1367 | Unspecified |
| scaffold8643 | 105779 | 106365 | - | RS3121 | Unspecified |
| scaffold8643 | 106362 | 106793 | - | RS810 | Unspecified |
| scaffold8643 | 107611 | 107772 | + | helitronORF | helitronORF(TransposonPSI) |
| scaffold8643 | 108750 | 108811 | + | RS5939 | Unspecified |
| scaffold8643 | 108750 | 108799 | - | PL814 | Unspecified |
| scaffold8643 | 108895 | 109350 | - | RS5950 | Unspecified |
| scaffold8643 | 111168 | 112161 | - | RS2700 | Unspecified |
| scaffold8643 | 112157 | 112672 | + | PL770 | Unspecified |
| scaffold8643 | 112393 | 113879 | + | RS801 | Unspecified |
| scaffold8643 | 112974 | 114746 | + | RS200 | Unspecified |
| scaffold8643 | 113324 | 116368 | + | RS21 | Unspecified |
| scaffold8643 | 115733 | 116902 | + | RS44 | Unspecified |
| scaffold8643 | 117296 | 117347 | + | (GCATCCAA)n | Simple_repeat |
| scaffold8643 | 118366 | 118398 | + | (ATACCC)n | Simple_repeat |
| scaffold8643 | 120462 | 120518 | + | (T)n | Simple_repeat |
| scaffold8643 | 121225 | 121349 | - | Copia-10_TC-I | LTR/Copia |
| scaffold8643 | 121577 | 121614 | + | (CCGG)n | Simple_repeat |
| scaffold8643 | 123277 | 123333 | + | (AAACTTCACG)n | Simple_repeat |
| scaffold8643 | 123506 | 123553 | - | MEGY-I_MT | LTR/Gypsy |
| scaffold8643 | 124999 | 125037 | + | (AAAGC)n | Simple_repeat |
| scaffold8643 | 126351 | 126391 | + | A-rich | Low_complexity |
| scaffold8643 | 127631 | 127687 | + | (AAACTTCACG)n | Simple_repeat |
| scaffold8643 | 128183 | 128700 | - | MEGY-I_MT | LTR/Gypsy |
| scaffold8643 | 128961 | 129445 | + | PL945 | Unspecified |
| scaffold8643 | 131885 | 132296 | - | RS2929 | Unspecified |
| scaffold8643 | 133651 | 134292 | + | TY1_Copia | TY1_Copia(TransposonPSI) |
| scaffold8643 | 133706 | 133856 | + | COP_I_MT-int | LTR/Copia |
| scaffold8643 | 134534 | 137677 | + | COP_I_MT-int | LTR/Copia |
| scaffold8643 | 138160 | 138229 | + | (ATTTTT)n | Simple_repeat |
| scaffold8643 | 138299 | 138361 | + | (ATTAT)n | Simple_repeat |
| scaffold8643 | 140038 | 140308 | + | RS1 | Unspecified |
| scaffold8643 | 140633 | 140737 | + | (TTTGTAAT)n | Simple_repeat |
| scaffold8643 | 140917 | 140950 | + | (CGTGTC)n | Simple_repeat |
| scaffold8643 | 141234 | 141658 | - | PL105 | Unspecified |
| scaffold8643 | 142140 | 142196 | + | (ACAGTGA)n | Simple_repeat |
| scaffold8643 | 142312 | 142493 | - | RS79 | Unspecified |
| scaffold8643 | 142494 | 142708 | - | RS898 | Unspecified |
| scaffold8643 | 142601 | 142730 | + | RS4042 | Unspecified |
| scaffold8643 | 143302 | 143483 | - | RS79 | Unspecified |
| scaffold8643 | 144009 | 144069 | + | A-rich | Low_complexity |
| scaffold8643 | 144970 | 145506 | - | RS372 | Unspecified |
| scaffold8643 | 145620 | 145667 | + | (ATTAA)n | Simple_repeat |
| scaffold8643 | 147263 | 147841 | + | RS418 | Unspecified |
| scaffold8643 | 147915 | 147946 | + | A-rich | Low_complexity |
| scaffold8643 | 147957 | 148286 | - | RS13440 | Unspecified |
| scaffold8643 | 149360 | 149481 | + | (CAGCT)n | Simple_repeat |
| scaffold8643 | 149804 | 149906 | + | RS18072 | Unspecified |
| scaffold8643 | 150179 | 150221 | - | RS17699 | Unspecified |
| scaffold8643 | 150188 | 150446 | - | RS1 | Unspecified |
| scaffold8643 | 152936 | 153080 | + | RS7315 | Unspecified |
| scaffold8643 | 153184 | 153391 | + | RS11351 | Unspecified |
| scaffold8643 | 153395 | 153499 | - | RS7579 | Unspecified |
| scaffold8643 | 153498 | 153960 | - | PL352 | Unspecified |
| scaffold8643 | 153959 | 154120 | - | RS7579 | Unspecified |
| scaffold8643 | 154421 | 154543 | + | RS12619 | Unspecified |
| scaffold8643 | 154794 | 154833 | + | (TCCCT)n | Simple_repeat |
| scaffold8643 | 156497 | 156619 | + | RS8982 | Unspecified |
| scaffold8643 | 157518 | 157667 | + | (AAT)n | Simple_repeat |
| scaffold8643 | 157518 | 157552 | + | (AAT)n | Simple_repeat |
| scaffold8643 | 157546 | 157667 | - | RS22 | Unspecified |
| scaffold8643 | 157667 | 157807 | + | A-rich | Low_complexity |
| scaffold8643 | 157729 | 157807 | + | A-rich | Low_complexity |
| scaffold8643 | 158341 | 158374 | + | A-rich | Low_complexity |
| scaffold8643 | 158388 | 158588 | - | RS5660 | Unspecified |
| scaffold8643 | 158438 | 158709 | - | RS2054 | Unspecified |
| scaffold8643 | 159105 | 159191 | - | Gypsy-3_PD-I | LTR/Gypsy |
| scaffold8643 | 159160 | 159196 | - | DIASPORA_I-int | LTR/Gypsy |
| scaffold8643 | 159439 | 159538 | + | RS1201 | Unspecified |
| scaffold8643 | 159498 | 159624 | + | RS1201 | Unspecified |
| scaffold8643 | 159647 | 159764 | - | TPN1_IN | DNA/CMC-EnSpm |
| scaffold8643 | 159662 | 159782 | + | TPN1_IN | DNA/CMC-EnSpm |
| scaffold8643 | 159905 | 160030 | - | RS10217 | Unspecified |
| scaffold8643 | 161633 | 161900 | + | RS937 | Unspecified |
| scaffold8643 | 161903 | 162947 | - | Copia-4_GM-I | LTR/Copia |
| scaffold8643 | 164978 | 165016 | + | A-rich | Low_complexity |
| scaffold8643 | 165599 | 165920 | + | RS132 | Unspecified |
| scaffold8643 | 165921 | 166149 | - | PL255 | Unspecified |
| scaffold8643 | 167507 | 167738 | + | RS132 | Unspecified |
| scaffold8643 | 167507 | 167768 | + | RS14842 | Unspecified |
| scaffold8643 | 167818 | 168053 | - | PL438 | Unspecified |
| scaffold8643 | 169422 | 169454 | + | (AAATA)n | Simple_repeat |
| scaffold8643 | 169509 | 169670 | + | RS7315 | Unspecified |
| scaffold8643 | 169765 | 169983 | + | RS11351 | Unspecified |
| scaffold8643 | 170129 | 170161 | + | (TTTGTT)n | Simple_repeat |
| scaffold8643 | 170595 | 170719 | + | RS12619 | Unspecified |
| scaffold8643 | 170871 | 170943 | + | (ATTT)n | Simple_repeat |
| scaffold8643 | 171168 | 171206 | + | (TTTTTA)n | Simple_repeat |
| scaffold8643 | 171586 | 171790 | + | RS880 | Unspecified |
| scaffold8643 | 173462 | 173584 | + | RS8982 | Unspecified |
| scaffold8643 | 173834 | 174120 | + | RS17362 | Unspecified |
| scaffold8643 | 174700 | 175076 | + | RS3032 | Unspecified |
| scaffold8643 | 175077 | 175221 | + | RS7315 | Unspecified |
| scaffold8643 | 175325 | 175532 | + | RS11351 | Unspecified |
| scaffold8643 | 175536 | 175640 | - | RS7579 | Unspecified |
| scaffold8643 | 175639 | 176101 | - | PL352 | Unspecified |
| scaffold8643 | 176100 | 176261 | - | RS7579 | Unspecified |
| scaffold8643 | 176562 | 176684 | + | RS12619 | Unspecified |
| scaffold8643 | 176935 | 176974 | + | (TCCCT)n | Simple_repeat |
| scaffold8643 | 178482 | 178604 | + | RS8982 | Unspecified |
| scaffold8643 | 179547 | 179643 | - | RS3380 | Unspecified |
| scaffold8643 | 179872 | 179901 | + | (GGT)n | Simple_repeat |
| scaffold8643 | 180135 | 180438 | + | RS221 | Unspecified |
| scaffold8643 | 180449 | 180707 | + | RS3535 | Unspecified |
| scaffold8643 | 180757 | 180809 | + | A-rich | Low_complexity |
| scaffold8643 | 180851 | 180992 | + | ATENSPM1 | DNA/CMC-EnSpm |
| scaffold8643 | 181033 | 181114 | - | RS598 | Unspecified |
| scaffold8643 | 181542 | 181691 | + | (AAT)n | Simple_repeat |
| scaffold8643 | 181542 | 181576 | + | (AAT)n | Simple_repeat |
| scaffold8643 | 181570 | 181691 | - | RS22 | Unspecified |
| scaffold8643 | 181691 | 181826 | + | A-rich | Low_complexity |
| scaffold8643 | 181753 | 181826 | + | A-rich | Low_complexity |
| scaffold8643 | 182360 | 182393 | + | A-rich | Low_complexity |
| scaffold8643 | 182407 | 182607 | - | RS5660 | Unspecified |
| scaffold8643 | 182457 | 182728 | - | RS2054 | Unspecified |
| scaffold8643 | 183121 | 183460 | - | RS3064 | Unspecified |
| scaffold8643 | 183438 | 183589 | + | RS1201 | Unspecified |
| scaffold8643 | 183883 | 184008 | - | RS10217 | Unspecified |
| scaffold8643 | 185608 | 185875 | + | RS937 | Unspecified |
| scaffold8643 | 185878 | 186921 | - | Copia-4_GM-I | LTR/Copia |
| scaffold8643 | 188953 | 188991 | + | A-rich | Low_complexity |
| scaffold8643 | 189574 | 189895 | + | RS132 | Unspecified |