scaffold8712 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8712 |
1 |
328 |
+ |
RS15722 |
Unspecified |
| scaffold8712 |
344 |
385 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold8712 |
437 |
473 |
+ |
(TT)n |
Simple_repeat |
| scaffold8712 |
1649 |
2088 |
+ |
RS14801 |
Unspecified |
| scaffold8712 |
2265 |
2475 |
+ |
RS8081 |
Unspecified |
| scaffold8712 |
3064 |
3110 |
+ |
RS6713 |
Unspecified |
| scaffold8712 |
3368 |
3454 |
+ |
RS41 |
Unspecified |
| scaffold8712 |
3934 |
3957 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8712 |
5184 |
5374 |
+ |
RS16371 |
Unspecified |
| scaffold8712 |
11353 |
11369 |
+ |
(A)n |
Simple_repeat |
| scaffold8712 |
13833 |
13859 |
+ |
(ATTATC)n |
Simple_repeat |
| scaffold8712 |
14393 |
14422 |
+ |
(A)n |
Simple_repeat |
| scaffold8712 |
14723 |
14761 |
+ |
(CGC)n |
Simple_repeat |
| scaffold8712 |
17547 |
17596 |
- |
RS7056 |
Unspecified |
| scaffold8712 |
17763 |
18158 |
- |
RS7056 |
Unspecified |
| scaffold8712 |
20951 |
21016 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8712 |
21547 |
21660 |
+ |
RS12449 |
Unspecified |
| scaffold8712 |
21567 |
21660 |
- |
RS4475 |
Unspecified |
| scaffold8712 |
21778 |
21893 |
+ |
RS11180 |
Unspecified |
| scaffold8712 |
22307 |
22333 |
+ |
A-rich |
Low_complexity |
| scaffold8712 |
22334 |
22349 |
+ |
(ACACAA)n |
Simple_repeat |
| scaffold8712 |
22807 |
22863 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold8712 |
23052 |
23078 |
+ |
(T)n |
Simple_repeat |
| scaffold8712 |
23196 |
23391 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold8712 |
25781 |
26160 |
+ |
RS15502 |
Unspecified |
| scaffold8712 |
27080 |
27195 |
- |
RS6807 |
Unspecified |
| scaffold8712 |
27109 |
27439 |
- |
RS11044 |
Unspecified |
| scaffold8712 |
27315 |
27496 |
+ |
RS17244 |
Unspecified |
| scaffold8712 |
27777 |
27910 |
- |
RS11488 |
Unspecified |
| scaffold8712 |
27852 |
27923 |
- |
RS221 |
Unspecified |
| scaffold8712 |
27949 |
27981 |
+ |
A-rich |
Low_complexity |
| scaffold8712 |
28729 |
28758 |
+ |
(AACA)n |
Simple_repeat |
| scaffold8712 |
28930 |
29229 |
+ |
RS12428 |
Unspecified |
| scaffold8712 |
29239 |
29412 |
+ |
RS5983 |
Unspecified |
| scaffold8712 |
29365 |
29556 |
+ |
RS14116 |
Unspecified |
| scaffold8712 |
29643 |
29750 |
- |
RS6074 |
Unspecified |
| scaffold8712 |
29938 |
29969 |
+ |
(AACAGA)n |
Simple_repeat |
| scaffold8712 |
30019 |
30089 |
- |
RS14205 |
Unspecified |
| scaffold8712 |
30021 |
30098 |
+ |
RS8 |
Unspecified |
| scaffold8712 |
30075 |
30203 |
+ |
RS8 |
Unspecified |
| scaffold8712 |
30385 |
30413 |
+ |
(T)n |
Simple_repeat |
| scaffold8712 |
30464 |
30621 |
- |
RS12683 |
Unspecified |
| scaffold8712 |
30735 |
30771 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold8712 |
31834 |
32037 |
- |
RS11488 |
Unspecified |
| scaffold8712 |
32653 |
32952 |
+ |
RS12428 |
Unspecified |
| scaffold8712 |
32962 |
33135 |
+ |
RS5983 |
Unspecified |
| scaffold8712 |
33088 |
33273 |
+ |
RS14116 |
Unspecified |
| scaffold8712 |
33360 |
33467 |
- |
RS6074 |
Unspecified |
| scaffold8712 |
34333 |
34360 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold8712 |
34414 |
34577 |
- |
RS12683 |
Unspecified |
| scaffold8712 |
34799 |
34822 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8712 |
34883 |
35187 |
+ |
RS873 |
Unspecified |
| scaffold8712 |
34886 |
35262 |
+ |
RS29 |
Unspecified |
| scaffold8712 |
35261 |
35293 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8712 |
35385 |
35457 |
+ |
(TATTATT)n |
Simple_repeat |
| scaffold8712 |
35805 |
35919 |
+ |
RS12142 |
Unspecified |
| scaffold8712 |
36212 |
36241 |
+ |
(AACA)n |
Simple_repeat |
| scaffold8712 |
36862 |
37161 |
+ |
RS12428 |
Unspecified |
| scaffold8712 |
37168 |
37338 |
+ |
RS5983 |
Unspecified |
| scaffold8712 |
37291 |
37476 |
+ |
RS14116 |
Unspecified |
| scaffold8712 |
37548 |
37664 |
- |
RS6074 |
Unspecified |
| scaffold8712 |
37927 |
37959 |
+ |
(A)n |
Simple_repeat |
| scaffold8712 |
38173 |
38197 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold8712 |
38352 |
38402 |
+ |
(AATTTTA)n |
Simple_repeat |
| scaffold8712 |
39056 |
39161 |
+ |
RS1751 |
Unspecified |
| scaffold8712 |
39161 |
39295 |
+ |
RS4200 |
Unspecified |
| scaffold8712 |
39662 |
39953 |
+ |
RS1751 |
Unspecified |
| scaffold8712 |
39769 |
40265 |
+ |
RS3835 |
Unspecified |
| scaffold8712 |
40199 |
40419 |
+ |
RS1554 |
Unspecified |
| scaffold8712 |
42084 |
42139 |
+ |
(TA)n |
Simple_repeat |
| scaffold8712 |
42657 |
42747 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold8712 |
43003 |
43093 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold8712 |
43304 |
43337 |
+ |
(T)n |
Simple_repeat |
| scaffold8712 |
44518 |
44627 |
+ |
RS41 |
Unspecified |
| scaffold8712 |
44676 |
44824 |
+ |
RS41 |
Unspecified |
| scaffold8712 |
45022 |
45346 |
+ |
L1-1_STu |
LINE/L1 |
| scaffold8712 |
45744 |
45877 |
+ |
RS16057 |
Unspecified |
| scaffold8712 |
46125 |
46188 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold8712 |
46243 |
46380 |
+ |
RS8327 |
Unspecified |
| scaffold8712 |
46391 |
46803 |
+ |
(CATG)n |
Simple_repeat |
| scaffold8712 |
46391 |
46424 |
+ |
(CATG)n |
Simple_repeat |
| scaffold8712 |
46418 |
46803 |
+ |
RS11581 |
Unspecified |
| scaffold8712 |
46823 |
46851 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold8712 |
47609 |
47696 |
+ |
(AT)n |
Simple_repeat |
| scaffold8712 |
47856 |
47875 |
+ |
(AT)n |
Simple_repeat |
| scaffold8712 |
47961 |
48161 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8712 |
47961 |
48016 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8712 |
47993 |
48161 |
- |
RS15131 |
Unspecified |
| scaffold8712 |
48321 |
48404 |
+ |
(TA)n |
Simple_repeat |
| scaffold8712 |
48492 |
49595 |
+ |
hAT |
hAT(TransposonPSI) |
| scaffold8712 |
48769 |
48871 |
+ |
METRAHAT |
DNA/hAT-Ac |
| scaffold8712 |
49094 |
49357 |
+ |
hAT-6_STu |
DNA/hAT-Ac |
| scaffold8712 |
49362 |
49404 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold8712 |
50230 |
50377 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold8712 |
50576 |
50630 |
+ |
(T)n |
Simple_repeat |
| scaffold8712 |
50672 |
50833 |
- |
RS12683 |
Unspecified |
| scaffold8712 |
51097 |
51147 |
+ |
A-rich |
Low_complexity |
| scaffold8712 |
51341 |
51370 |
+ |
(AACA)n |
Simple_repeat |
| scaffold8712 |
51967 |
51994 |
+ |
(AT)n |
Simple_repeat |
| scaffold8712 |
52025 |
52327 |
+ |
RS12428 |
Unspecified |
| scaffold8712 |
52334 |
52504 |
+ |
RS5983 |
Unspecified |
| scaffold8712 |
52457 |
52642 |
+ |
RS14116 |
Unspecified |
| scaffold8712 |
52720 |
52830 |
- |
RS6074 |
Unspecified |
| scaffold8712 |
53187 |
53238 |
+ |
A-rich |
Low_complexity |
| scaffold8712 |
53384 |
53406 |
+ |
(T)n |
Simple_repeat |
| scaffold8712 |
53459 |
53619 |
- |
RS12683 |
Unspecified |
| scaffold8712 |
53643 |
54033 |
+ |
RS10808 |
Unspecified |
| scaffold8712 |
54369 |
54630 |
+ |
RS185 |
Unspecified |
| scaffold8712 |
55172 |
55245 |
+ |
DNA-TA-2_STu |
DNA/TcMar-Stowaway |
| scaffold8712 |
55245 |
55355 |
- |
RS82 |
Unspecified |
| scaffold8712 |
55579 |
55632 |
+ |
A-rich |
Low_complexity |
| scaffold8712 |
55946 |
56151 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold8712 |
56861 |
56911 |
- |
RS12789 |
Unspecified |
| scaffold8712 |
56870 |
57273 |
+ |
RS29 |
Unspecified |
| scaffold8712 |
58774 |
58965 |
+ |
L1-1_STu |
LINE/L1 |
| scaffold8712 |
59168 |
59271 |
+ |
RS3409 |
Unspecified |
| scaffold8712 |
59408 |
59534 |
+ |
RS16057 |
Unspecified |
| scaffold8712 |
60147 |
60163 |
+ |
(A)n |
Simple_repeat |
| scaffold8712 |
60316 |
60703 |
+ |
RS11581 |
Unspecified |
| scaffold8712 |
60836 |
60876 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold8712 |
60887 |
60992 |
- |
RS285 |
Unspecified |
| scaffold8712 |
61040 |
61166 |
+ |
RS16057 |
Unspecified |
| scaffold8712 |
61614 |
61754 |
+ |
RS8327 |
Unspecified |
| scaffold8712 |
61778 |
62165 |
+ |
RS11581 |
Unspecified |
| scaffold8712 |
62298 |
62338 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold8712 |
62349 |
62454 |
- |
RS285 |
Unspecified |
| scaffold8712 |
62488 |
62507 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8712 |
62988 |
63139 |
+ |
(TCTATAA)n |
Simple_repeat |
| scaffold8712 |
63863 |
63921 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold8712 |
63931 |
64311 |
+ |
RS160 |
Unspecified |
| scaffold8712 |
64210 |
64334 |
+ |
RS3590 |
Unspecified |
| scaffold8712 |
64625 |
64795 |
+ |
RS11291 |
Unspecified |
| scaffold8712 |
64837 |
64878 |
+ |
GA-rich |
Low_complexity |
| scaffold8712 |
65170 |
65425 |
+ |
RS9324 |
Unspecified |
| scaffold8712 |
65468 |
65620 |
+ |
RS492 |
Unspecified |
| scaffold8712 |
65642 |
65845 |
+ |
RS8081 |
Unspecified |
| scaffold8712 |
66374 |
66545 |
+ |
RS8026 |
Unspecified |
| scaffold8712 |
66571 |
67019 |
- |
RS8300 |
Unspecified |
| scaffold8712 |
67239 |
67274 |
+ |
(A)n |
Simple_repeat |
| scaffold8712 |
67317 |
67527 |
+ |
RS2858 |
Unspecified |
| scaffold8712 |
67595 |
67650 |
+ |
(A)n |
Simple_repeat |