/*menu bar*/
body#syncircos-body a#syncircos-nav,
body#synbrowser-body a#synbrowser-nav,
body#tutorial-body a#tutorial-nav,
body#main-body a#main-nav {
	color: #fff;
}

body {
	margin:auto;
	margin-top:50px;
	width:1000px;
}

div {
	display: inline-block;
}

select {
	width: 100px;
	height: 30px;
	padding: 4px;
	display: inline-block;
	line-height:20px;
	font-size: 13px;
	border: 1px solid #ccc;
	-webkit-border-radius: 3px;
	-moz-border-radius: 3px;
	border-radius: 3px;
}

textarea {
	width: 300px;
	height: 30px;
	padding: 4px;
	display: inline-block;
	line-height:20px;
	font-size: 13px;
	border: 1px solid #ccc;
	-webkit-border-radius: 3px;
	-moz-border-radius: 3px;
	border-radius: 3px;
	resize: none;
	transition: border linear 0.2s, box-shadow linear 0.2s;
	box-shadow: inset 0 1px 3px rgba(0, 0, 0, 0.1);
	overflow: auto;
    vertical-align: top;
}

table td {
	text-align: center;
	border:none;
}

/* Circos & Browser */
.browser_txt {
	width: 100px;
	height: 30px;
	padding: 4px;
	display: inline-block;
	line-height:20px;
	font-size: 13px;
	border: 1px solid #ccc;
	-webkit-border-radius: 3px;
	-moz-border-radius: 3px;
	border-radius: 3px;
	resize: none;
	transition: border linear 0.2s, box-shadow linear 0.2s;
	box-shadow: inset 0 1px 3px rgba(0, 0, 0, 0.1);
	overflow: auto;
    vertical-align: top;
}

.msp_submit_btn {
	-moz-box-shadow:inset 0px 1px 0px 0px #bbdaf7;
	-webkit-box-shadow:inset 0px 1px 0px 0px #bbdaf7;
	box-shadow:inset 0px 1px 0px 0px #bbdaf7;
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #79bbff), color-stop(1, #378de5));
	background:-moz-linear-gradient(top, #79bbff 5%, #378de5 100%);
	background:-webkit-linear-gradient(top, #79bbff 5%, #378de5 100%);
	background:-o-linear-gradient(top, #79bbff 5%, #378de5 100%);
	background:-ms-linear-gradient(top, #79bbff 5%, #378de5 100%);
	background:linear-gradient(to bottom, #79bbff 5%, #378de5 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#79bbff', endColorstr='#378de5',GradientType=0);
	background-color:#79bbff;
	-moz-border-radius:6px;
	-webkit-border-radius:6px;
	border-radius:6px;
	border:1px solid #84bbf3;
	display:inline-block;
	cursor:pointer;
	font-family:Arial;
	color:#ffffff;
	font-size:13px;
	font-weight:bold;
	padding:4px 10px 4px;
	text-decoration:none;
	text-shadow:0px 1px 0px #528ecc;
	vertical-align: middle;
}
.msp_submit_btn:hover {
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #378de5), color-stop(1, #79bbff));
	background:-moz-linear-gradient(top, #378de5 5%, #79bbff 100%);
	background:-webkit-linear-gradient(top, #378de5 5%, #79bbff 100%);
	background:-o-linear-gradient(top, #378de5 5%, #79bbff 100%);
	background:-ms-linear-gradient(top, #378de5 5%, #79bbff 100%);
	background:linear-gradient(to bottom, #378de5 5%, #79bbff 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#378de5', endColorstr='#79bbff',GradientType=0);
	background-color:#378de5;
}
.msp_submit_btn:active {
	position:relative;
	top:1px;
}


.msp_publish_btn {
	-moz-box-shadow:inset 0px 1px 0px 0px #caefab;
	-webkit-box-shadow:inset 0px 1px 0px 0px #caefab;
	box-shadow:inset 0px 1px 0px 0px #caefab;
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #b7eb86), color-stop(1, #7ac240));
	background:-moz-linear-gradient(top, #b7eb86 5%, #7ac240 100%);
	background:-webkit-linear-gradient(top, #b7eb86 5%, #7ac240 100%);
	background:-o-linear-gradient(top, #b7eb86 5%, #7ac240 100%);
	background:-ms-linear-gradient(top, #b7eb86 5%, #7ac240 100%);
	background:linear-gradient(to bottom, #b7eb86 5%, #7ac240 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#b7eb86', endColorstr='#7ac240',GradientType=0);
	background-color:#b7eb86;
	-moz-border-radius:6px;
	-webkit-border-radius:6px;
	border-radius:6px;
	border:1px solid #8dcc82;
	display:inline-block;
	cursor:pointer;
	color:#ffffff;
	font-family:Arial;
	font-size:13px;
	font-weight:bold;
	padding:4px 14px 4px;
	text-decoration:none;
	text-shadow:0px 1px 0px #8a8a8a;
}
.msp_publish_btn:hover {
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #7ac240), color-stop(1, #b7eb86));
	background:-moz-linear-gradient(top, #7ac240 5%, #b7eb86 100%);
	background:-webkit-linear-gradient(top, #7ac240 5%, #b7eb86 100%);
	background:-o-linear-gradient(top, #7ac240 5%, #b7eb86 100%);
	background:-ms-linear-gradient(top, #7ac240 5%, #b7eb86 100%);
	background:linear-gradient(to bottom, #7ac240 5%, #b7eb86 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#7ac240', endColorstr='#b7eb86',GradientType=0);
	background-color:#7ac240;
}
.msp_publish_btn:active {
	position:relative;
	top:1px;
}

.msp_reset_btn,
.msp_delete_btn
{
	-moz-box-shadow:inset 0px 1px 0px 0px #f7c5c0;
	-webkit-box-shadow:inset 0px 1px 0px 0px #f7c5c0;
	box-shadow:inset 0px 1px 0px 0px #f7c5c0;
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #fc8d83), color-stop(1, #e4685d));
	background:-moz-linear-gradient(top, #fc8d83 5%, #e4685d 100%);
	background:-webkit-linear-gradient(top, #fc8d83 5%, #e4685d 100%);
	background:-o-linear-gradient(top, #fc8d83 5%, #e4685d 100%);
	background:-ms-linear-gradient(top, #fc8d83 5%, #e4685d 100%);
	background:linear-gradient(to bottom, #fc8d83 5%, #e4685d 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#fc8d83', endColorstr='#e4685d',GradientType=0);
	background-color:#fc8d83;
	-moz-border-radius:6px;
	-webkit-border-radius:6px;
	border-radius:6px;
	border:1px solid #FF7E7E;
	display:inline-block;
	cursor:pointer;
	color:#ffffff;
	font-family:Arial;
	font-size:13px;
	font-weight:bold;
	padding:4px 14px 4px;
	text-decoration:none;
	text-shadow:0px 1px 0px #b23e35;
}
.msp_reset_btn:hover,
.msp_delete_btn:hover 
{
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #e4685d), color-stop(1, #fc8d83));
	background:-moz-linear-gradient(top, #e4685d 5%, #fc8d83 100%);
	background:-webkit-linear-gradient(top, #e4685d 5%, #fc8d83 100%);
	background:-o-linear-gradient(top, #e4685d 5%, #fc8d83 100%);
	background:-ms-linear-gradient(top, #e4685d 5%, #fc8d83 100%);
	background:linear-gradient(to bottom, #e4685d 5%, #fc8d83 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#e4685d', endColorstr='#fc8d83',GradientType=0);
	background-color:#e4685d;
}
.msp_reset_btn:active,
.msp_delete_btn:active
 {
	position:relative;
	top:1px;
}


.msp_btn {
	-moz-box-shadow:inset 0px 1px 0px 0px #ffffff;
	-webkit-box-shadow:inset 0px 1px 0px 0px #ffffff;
	box-shadow:inset 0px 1px 0px 0px #ffffff;
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #ffffff), color-stop(1, #f6f6f6));
	background:-moz-linear-gradient(top, #ffffff 5%, #f6f6f6 100%);
	background:-webkit-linear-gradient(top, #ffffff 5%, #f6f6f6 100%);
	background:-o-linear-gradient(top, #ffffff 5%, #f6f6f6 100%);
	background:-ms-linear-gradient(top, #ffffff 5%, #f6f6f6 100%);
	background:linear-gradient(to bottom, #ffffff 5%, #f6f6f6 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#ffffff', endColorstr='#f6f6f6',GradientType=0);
	background-color:#ffffff;
	-moz-border-radius:6px;
	-webkit-border-radius:6px;
	border-radius:6px;
	border:1px solid #dcdcdc;
	display:inline-block;
	cursor:pointer;
	font-family:Arial;
	color:#333;
	font-size:13px;
	padding:5px 14px 5px;
	text-decoration:none;
	text-shadow:0px 1px 0px #ffffff;
	height:30px;
}
.msp_btn:hover {
	background:-webkit-gradient(linear, left top, left bottom, color-stop(0.05, #f6f6f6), color-stop(1, #ffffff));
	background:-moz-linear-gradient(top, #f6f6f6 5%, #ffffff 100%);
	background:-webkit-linear-gradient(top, #f6f6f6 5%, #ffffff 100%);
	background:-o-linear-gradient(top, #f6f6f6 5%, #ffffff 100%);
	background:-ms-linear-gradient(top, #f6f6f6 5%, #ffffff 100%);
	background:linear-gradient(to bottom, #f6f6f6 5%, #ffffff 100%);
	filter:progid:DXImageTransform.Microsoft.gradient(startColorstr='#f6f6f6', endColorstr='#ffffff',GradientType=0);
	background-color:#f6f6f6;
}
.msp_btn:active {
	position:relative;
	top:1px;
}

.circos_species {
	display: inline-block;
}

.Question_box{
	margin: 20px auto;
    padding: 10px;
    background: -webkit-gradient(linear, 100% 100%, 50% 10%, from(#fff), to(#f3f3f3), color-stop(.1,#fff));
	background-image: linear-gradient(to left, #fff 0%, #f3f3f3 80%);
    border: 1px solid #8C8C8C;
}

.tbottom {
	width:20%;
	padding-bottom:0px;
	vertical-align:bottom;	
}

.qimg {
	vertical-align:top;
}

#demo-controls {
  padding: 10px;
}

.control-item {
  padding: 5px;
}

#circularchart {
    shape-rendering: geometricPrecision;
}

.dragbar-line {
    stroke-width: 1;	
    stroke: lightgrey;
    pointer-events: inherit;
}

.dragbar-shadow {
    stroke-width: 1;	
    stroke: lightgrey;
    fill: transparent;
}

.move-cross {
    stroke-width: 1;
    stroke: lightgrey;
    fill: lightgrey;
    cursor:move;
}

.move-shadow {
    cursor:move !important;
}

#sy_gene_annotation_rect {
    cursor: -webkit-grab; cursor: -moz-grab;
}

#sy_gene_annotation_rect:active {
    cursor: -webkit-grabbing; cursor: -moz-grabbing;
}

.mainTrack {
    cursor: pointer;
    cursor: hand;
}

.track1_arrow_pos, .track1_arrow_neg, .track3_arrow {
    stroke-width: 1;
    stroke: black;
}

.trackAxis .domain {
    stroke-width: 1;
}


.brush .background {
    stroke: none;
    fill: none;
}

.brush .extent {
    stroke: none;
    fill: #1e90ff;
    opacity: .3;
}

.polarbrush {
    fill: lightgrey;
    opacity: 0.5;
}


.brushEnd {
    fill: "red";
}

.brushStart {
    fill: "green";
}

.linear_hidden {
	visibility: hidden;
}

.lollipophead {
  stroke:#000000;
  stroke-opacity: 1;
  fill: none;
}

.lollipopstemstart {
  fill:none;
  stroke:#000000;
  stroke-width: 1px;
  stroke-linecap:butt;
  stroke-linejoin:miter;
  stroke-dasharray: 5,5;
}

.lollipopstemend {
  fill:none;
  stroke:#000000;
  stroke-width: 1px;
  stroke-linecap:butt;
  stroke-linejoin:miter;
}

.d3-tip {
  line-height: 1;
  font: 12px arial;
  font-weight: bold;
  padding: 12px;
  background: rgba(0, 0, 0, 0.8);
  color: #fff;
  border-radius: 2px;

}

.d3-tip:after {
  box-sizing: border-box;
  display: inline;
  font-size: 10px;
  width: 100%;
  line-height: 1;
  color: rgba(0, 0, 0, 0.8);
  content: "\25BC";
  position: absolute;
  text-align: center;
}

.d3-tip.n:after {
  margin: -1px 0 0 0;
  top: 100%;
  left: 0;
}

#sy_search_text {
	width: 100px;
}

.ui-autocomplete-input{
	width: 100px;
}

.ui-autocomplete {
	max-width: 150px;
    max-height: 150px;
    overflow-y: auto;
    overflow-x: hidden;
}

.publish_group {
		display:none;
}

body#syncircos-body .publish_group,
body#synbrowser-body .publish_group {
	display:inline-block;
}