Carnation DB

Dca1787.1

Annotation

10-exons
f-1
sp|B9S6M7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1110920#GO:0003824#1F0P0C
sp|G7KBB1_MEDTR#Serine protease htrA-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g064160#GO:0008233;GO:0006508#1F1P0C
Repeat List (scaffold1058)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1787.1	22	385	393	38.67	364	41	5e-74
Target_name	Start	End	Length	Cov(%)
sp\|B9S6M7_RICCO	43	406	434	83.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1787.1	52	390	393	25.95	339	30	2e-29
Target_name	Start	End	Length	Cov(%)
Os09t0436400-01	84	406	457	70.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1058	Augustus	mRNA	12328	15478	.	+	.	ID=Dca1787.1;Parent=Dca1787
scaffold1058	Augustus	exon	12328	12391	.	+	.	ID=Dca1787.1.exon1;Parent=Dca1787.1
scaffold1058	Augustus	exon	12683	12829	.	+	.	ID=Dca1787.1.exon2;Parent=Dca1787.1
scaffold1058	Augustus	exon	12934	13076	.	+	.	ID=Dca1787.1.exon3;Parent=Dca1787.1
scaffold1058	Augustus	exon	13167	13432	.	+	.	ID=Dca1787.1.exon4;Parent=Dca1787.1
scaffold1058	Augustus	exon	13577	13646	.	+	.	ID=Dca1787.1.exon5;Parent=Dca1787.1
scaffold1058	Augustus	exon	13750	13883	.	+	.	ID=Dca1787.1.exon6;Parent=Dca1787.1
scaffold1058	Augustus	exon	14016	14136	.	+	.	ID=Dca1787.1.exon7;Parent=Dca1787.1
scaffold1058	Augustus	exon	14568	14660	.	+	.	ID=Dca1787.1.exon8;Parent=Dca1787.1
scaffold1058	Augustus	exon	15238	15362	.	+	.	ID=Dca1787.1.exon9;Parent=Dca1787.1
scaffold1058	Augustus	exon	15460	15478	.	+	.	ID=Dca1787.1.exon10;Parent=Dca1787.1