Carnation DB

Dca1789.1

Annotation

7-exons
f-1
sp|D7KNF4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_335585#GO:0003723#1F0P0C
AT1G23400.1 | Symbols: CAF2, ATCAF2 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | chr1:8312199-8314740 REVERSE LENGTH=564
Repeat List (scaffold1058)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1789.1	4	561	575	54.95	558	56	5e-168
Target_name	Start	End	Length	Cov(%)
sp\|D7KNF4_ARALL	3	525	565	92.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1789.1	4	565	575	53.56	562	54	2e-166
Target_name	Start	End	Length	Cov(%)
AT1G23400.1	3	525	564	92.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1058	Augustus	mRNA	28033	31206	.	+	.	ID=Dca1789.1;Parent=Dca1789
scaffold1058	Augustus	exon	28033	28762	.	+	.	ID=Dca1789.1.exon1;Parent=Dca1789.1
scaffold1058	Augustus	exon	29146	29205	.	+	.	ID=Dca1789.1.exon2;Parent=Dca1789.1
scaffold1058	Augustus	exon	29338	29465	.	+	.	ID=Dca1789.1.exon3;Parent=Dca1789.1
scaffold1058	Augustus	exon	29585	29810	.	+	.	ID=Dca1789.1.exon4;Parent=Dca1789.1
scaffold1058	Augustus	exon	30019	30146	.	+	.	ID=Dca1789.1.exon5;Parent=Dca1789.1
scaffold1058	Augustus	exon	30627	30768	.	+	.	ID=Dca1789.1.exon6;Parent=Dca1789.1
scaffold1058	Augustus	exon	30893	31206	.	+	.	ID=Dca1789.1.exon7;Parent=Dca1789.1