Carnation DB

Dca36773.1

Annotation

5-exons
f-1
sp|B9IKC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_668840#GO:0008270#1F0P0C
sp|B9RQU2_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0706540#GO:0008270#1F0P0C
Repeat List (scaffold3887)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36773.1	1	253	254	78.74	253	80	1e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9IKC9_POPTR	1	252	253	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36773.1	8	253	254	72.04	246	72	3e-91
Target_name	Start	End	Length	Cov(%)
AT5G20510.1	9	259	260	96.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3887	Augus-PASA	mRNA	508	3403	.	+	.	ID=Dca36773.1;Parent=Dca36773
scaffold3887	Augus-PASA	exon	508	604	.	+	.	ID=Dca36773.1.exon1;Parent=Dca36773.1
scaffold3887	Augus-PASA	exon	842	874	.	+	.	ID=Dca36773.1.exon2;Parent=Dca36773.1
scaffold3887	Augus-PASA	exon	2190	2418	.	+	.	ID=Dca36773.1.exon3;Parent=Dca36773.1
scaffold3887	Augus-PASA	exon	2747	2882	.	+	.	ID=Dca36773.1.exon4;Parent=Dca36773.1
scaffold3887	Augus-PASA	exon	3134	3403	.	+	.	ID=Dca36773.1.exon5;Parent=Dca36773.1