Carnation DB

Dca42965.1

Annotation

6-exons
f-1
sp|B9SLM9_RICCO#Arginyl-tRNA--protein transferase 1#Ricinus communis (Castor bean)#ORFNames=RCOM_0593160#GO:0005737;GO:0004814;GO:0004057;GO:0005524;GO:0006420;GO:0016598#3F2P1C
Repeat List (scaffold4860)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42965.1	19	606	607	55.02	588	55	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SLM9_RICCO	20	628	629	96.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42965.1	8	606	607	50.9	599	49	2e-166
Target_name	Start	End	Length	Cov(%)
AT5G05700.1	7	631	632	98.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4860	Augustus	mRNA	31189	36594	.	+	.	ID=Dca42965.1;Parent=Dca42965
scaffold4860	Augustus	exon	31189	31327	.	+	.	ID=Dca42965.1.exon1;Parent=Dca42965.1
scaffold4860	Augustus	exon	32915	32953	.	+	.	ID=Dca42965.1.exon2;Parent=Dca42965.1
scaffold4860	Augustus	exon	33711	33861	.	+	.	ID=Dca42965.1.exon3;Parent=Dca42965.1
scaffold4860	Augustus	exon	34086	35180	.	+	.	ID=Dca42965.1.exon4;Parent=Dca42965.1
scaffold4860	Augus-PASA	exon	35851	36133	.	+	.	ID=Dca42965.1.exon5;Parent=Dca42965.1
scaffold4860	Augus-PASA	exon	36478	36594	.	+	.	ID=Dca42965.1.exon6;Parent=Dca42965.1