Carnation DB

Dca46012.1

Annotation

5-exons
f-1
sp|B9GZT5_POPTR#Phosphoribulokinase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_712554#GO:0005524;GO:0008974;GO:0005975#2F1P0C
Repeat List (scaffold5448)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46012.1	1	401	401	84.78	401	83	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GZT5_POPTR	1	405	405	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46012.1	1	400	401	83.04	400	83	0
Target_name	Start	End	Length	Cov(%)
Os02t0698000-03	1	402	404	99.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5448	Augustus	mRNA	13709	17711	.	-	.	ID=Dca46012.1;Parent=Dca46012
scaffold5448	Augustus	exon	13709	13960	.	-	.	ID=Dca46012.1.exon1;Parent=Dca46012.1
scaffold5448	Augustus	exon	15043	15287	.	-	.	ID=Dca46012.1.exon2;Parent=Dca46012.1
scaffold5448	Augus-PASA	exon	15392	15476	.	-	.	ID=Dca46012.1.exon3;Parent=Dca46012.1
scaffold5448	Augus-PASA	exon	15668	15752	.	-	.	ID=Dca46012.1.exon4;Parent=Dca46012.1
scaffold5448	Augus-PASA	exon	17173	17711	.	-	.	ID=Dca46012.1.exon5;Parent=Dca46012.1