Dca46377.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5527)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46377.1 |
9 |
205 |
223 |
56.95 |
197 |
56 |
6e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
652 |
878 |
896 |
25.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46377.1 |
31 |
205 |
223 |
29.59 |
175 |
33 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1378 |
1401 |
14.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5527 |
Augustus |
mRNA |
3709 |
4470 |
. |
+ |
. |
ID=Dca46377.1;Parent=Dca46377 |
| scaffold5527 |
Augustus |
exon |
3709 |
3960 |
. |
+ |
. |
ID=Dca46377.1.exon1;Parent=Dca46377.1 |
| scaffold5527 |
Augustus |
exon |
4051 |
4470 |
. |
+ |
. |
ID=Dca46377.1.exon2;Parent=Dca46377.1 |
