Carnation DB

Dca6394.1

Annotation

7-exons
f-1
sp|B9IKG3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825668#GO:0004176;GO:0006508#1F1P0C
AT2G25740.1 | Symbols: | ATP-dependent protease La (LON) domain protein | chr2:10980175-10983632 FORWARD LENGTH=547
Repeat List (scaffold125)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6394.1	10	280	282	37.94	271	40	1e-42
Target_name	Start	End	Length	Cov(%)
sp\|B9IKG3_POPTR	47	251	542	37.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6394.1	2	247	282	31.56	246	36	1e-32
Target_name	Start	End	Length	Cov(%)
AT2G25740.1	48	229	547	33.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold125	Augustus	mRNA	141055	143484	.	+	.	ID=Dca6394.1;Parent=Dca6394
scaffold125	Augustus	exon	141055	141148	.	+	.	ID=Dca6394.1.exon1;Parent=Dca6394.1
scaffold125	Augustus	exon	141233	141408	.	+	.	ID=Dca6394.1.exon2;Parent=Dca6394.1
scaffold125	Augustus	exon	142135	142189	.	+	.	ID=Dca6394.1.exon3;Parent=Dca6394.1
scaffold125	Augustus	exon	142317	142429	.	+	.	ID=Dca6394.1.exon4;Parent=Dca6394.1
scaffold125	Augustus	exon	142512	142556	.	+	.	ID=Dca6394.1.exon5;Parent=Dca6394.1
scaffold125	Augustus	exon	143014	143175	.	+	.	ID=Dca6394.1.exon6;Parent=Dca6394.1
scaffold125	Augustus	exon	143281	143484	.	+	.	ID=Dca6394.1.exon7;Parent=Dca6394.1